ChIP-Atlas: Target genes

Potential target genes for CPSF4

Query protein: CPSF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652958 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF4's Target genes

◢ CPSF4: Average

◢ SRX13652957: HeLa

◣ SRX13652958: HeLa

◢ SRX13652959: HeLa

◢ SRX13652960: HeLa

◢ CPSF4: STRING

KMT2A
SNX12
DUX4
LEKR1
DRAP1
C11orf68
ARL4D
ZNF143
POLR2J3
GAS8
FRG2C
NUP160
ZNF76
IL7R
GDA
PDXDC1
ARRDC4
NR4A1
TUSC2
HYAL2
HYAL1
KRT34
HSPE1-MOB4
HSPE1
HSPD1
PADI2
CYB561D1
ATXN7L2
ZBTB38
HHIPL1
CCDC85C
MTRNR2L1
FAM53C
CDC25C
DAGLA
BHLHE40
KCNJ15
PPDPFL
NNMT
SRI
KRT10
ITGB5
HNRNPA2B1
CBX3
PSMC3
SLC39A13
HARBI1
ATG13
FGGY
ITPK1
TSR3
GNPTG
C11orf86
WDR74
STX5
CD22
STRBP
CSGALNACT1
PTGES
TFAP2A
KCNK4
GPR137
BAD
ATR
BIRC7
CARD16
VSIR
TBL1X
TM4SF18
GBA
DYNC2I2
FLYWCH2
C5orf51
ASB2
FAM72C
FAM72A
RARRES1
LOC102724770
DGCR6
NUDT3
COA1
KRT86
TXNIP
PDE4DIP
RIN1
BRMS1
WASF2
BCAS1
SLC35E2B
DUSP5
SNX15
RAB22A
RCOR3
PLAU
SMIM41
ATG101
BIRC3
HMG20B
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
KLRC2
CMSS1
SH3BP4
TPD52
OR10D3
KRT8
ERCC1
PSMA7
H4C14
H3C15
H3C14
H2AC19
H2AC18
RPN2
MROH8
PIK3R3
PRRT2
MAZ
NT5C2
TES
FHL2
IQCH
AAGAB
LIPK
DDX47
TENT4A
NEK2
ZG16B
TMEM250
YY1AP1
DAP3
PTPRB
TRAPPC9
EIF2S3
OTULINL
FRG2
BRIX1
HAX1
HEXA
FAM72B
ATF7-NPFF
ATF7
FOS
GTF3C5
UBXN8
GSR
CETP
TEAD1
STX16
S100A2
SLC25A25
NAIF1
AMOTL2
PRKAG2
EIF3F
H4C12
H4C11
H2BC15
H2AC15
OLFML2A
NR6A1
TOX2
RIC3
EIF2D
CD55
RNASEH2C
KAT5
CYP27C1
RHOT2
RHBDL1
IKZF3
SPNS1
LAT
RFX1
TSC1
GFI1B
MAOA
H1-2
H3C3
TXNRD1
CPA4
PLEKHA8
FKBP14
HNRNPF
WFDC1
ZNF687
TBC1D2
SCHIP1
WDR70
NUP155
HAGH
FAHD1
POLG
TOR2A
ATP6V0C
AMDHD2
PDE4D
FAM72D
LAMP1
GLIS1
TGFBR2
TAF12
KRT31
GFM1
UBE2B
CDKL3
TEX12
IL18
PDCD6
OAS1
AGAP11
ADIRF
SLC16A5
EEF1AKMT3
FAM156B
FAM156A
TSFM
NAGPA
PPL
PDK2
ALDH18A1
MFSD12
BRPF1
CDON
LOC102723996
ICOSLG
S100A16
S100A14
USP2
IER3
FLOT1
RAPGEF1
CLDN4
SFSWAP
ARL8B
PRSS38
GPRC5A
RBM48
PEX1
PRKCZ
PRKACG
CDIPT
UBC
THEM4
DNAJC11
CITED4
KIF2C
KIF1C
INCA1
CAMTA2
LHFPL2
TEKT2
ADPRS
BCL3
RIPOR2
COA6
ISY1-RAB43
ISY1
GIT2
ANKRD13A
PKP1
PRKCI
CUL2
ZC3H6
EAPP
PPP1R13L
POLR1G
SCAND1
NOL8
CENPP
AURKAIP1
MRPL48
NIBAN2
SETD1A
ORAI3
WDR43
IL24
PACSIN3
ARFGAP2
STX1A
SLC41A3
P4HB
ZSWIM1
SPATA25
NEURL2
CTSA
TMEM185B
CLPTM1
APOC2
POR
RAPGEF3
DNAJB12
TSN
NADK2
SURF6
KCTD5
ASB6
FBXO4
RHOF
NYX
C1orf198
CAPN2
SEMA3B
LSMEM2
RETREG1
ATL2
ZNF608
LRRC37A3
CYP1B1
NDUFS3
KBTBD4
FAM180B
FAM102A
ATAD2
CLTC
CCL28
PPEF1
CDK1
CMC2
CENPN
EIF3B
RPL37
CARD6
TIGD5
EEF1D
GATA2
SNAPC1
ICE1
RASSF9
TBPL2
WASHC2C
GKN1
RPL26
KRBA2
ZNF341
SMYD3
MALL
SPINT2
GSTA3
POLR2J
NCOA7
UBE2I
MEAK7
PPIB
H4C15
SYNGAP1
PHF1
CUTA
SPINK4
JUND
IQCN
RNF223
RHCG
TM4SF1
SLC39A10
KLF1
GCDH
DNASE2
NDST2
TRIP10
GPR108
SLC25A1
SYT5
MAIP1
LOC388282
KIFC3
OSBP2
AAAS
NKD2
SQSTM1
SUMF1
STPG3
NELFB
FAM166A
SLC9A1
ATG16L2
SSNA1
ANAPC2
DISP3
FZR1
DOHH
RPS26
AMOTL1
RALGDS
TRMO
USP15
CRBN
USE1
INTS4
DDX17
MEF2D
MYL12A
MYL12B
MLLT1
ROBO1
TMEM222
SUPT7L
SLC4A1AP
WDR13
GNAS
PTP4A1
ANK3
TSEN54
LLGL2
CASKIN2
FOLR3
TRIP13
BRD9
NDUFB1
CPSF2
PTDSS1
MTERF3
ZNF335
CD1D
TSR2
TMC5
MRPS30
PIMREG
AIPL1
DDX18
ATXN1
CLCN7
CDCA7L
MRPS16
DNAJC9
ANKRD35
ASH1L
JAGN1
CIDEC
RELA
SULT1A4
SULT1A3
SLC8A1
WDTC1
DGAT2
CDIN1
LMNTD1
BAZ2A
ZFAND3
GIPC1
RPS20
TMEM95
KCTD11
MT1M
MT1E
CALM1
CDK5RAP2
INAVA
CEP295
NTF3
CTCF
ZWILCH
SNAPC5
RPL4
SPTLC3
MIDEAS
QRICH1
LGALS9B
CCAR2
C8orf58
MYO9B
HAUS8
IRAG1
WARS2
INA
NR2F2
ZNF281
SMIM12
KCNJ18
TNS3
SCAF11
H2BC3
OSMR
TRUB2
COQ4
TMEM260
VIRMA
COG2
CFAP20
RNF103-CHMP3
RMND5A
EFCAB14
NSFL1C
CELF1
GYPC
SLC48A1
DIP2A
MMP13
AVPI1
ZBTB26
RABGAP1
TPK1
RPLP0
GCN1
SPATA46
C1orf226
ZZZ3
GDF15
PMVK
MGLL
LRRC20
C1orf174
SLC6A18
PHF19
HMCES
PRSS27
OXR1
ARFGEF2
APOBEC3B
NAA60
SLC35B1
TMEM107
NMUR2
SYT7
POLA1
QSOX2
PCCB
ZBED5
HNRNPH1
MMP3
MGST3
TTLL6
PPP2R5A
TNFAIP8
DPH7
INTS7
DTL
LRATD2
RHOBTB2
PPCDC
CSRP1
ARID1A
PDXK
DOCK5
VPS33A
ZNF598
NPW
CMIP
CDK16
IBA57
TRIM33
PPP4R3A
GNL3L
VPS52
RPS18
B3GALT4
PPWD1
CENPK
PSG1
S100A13
S100A1
CHTOP
RBM8A
PEX11B
DAB2
PTP4A2
VAMP2
PER1
LRPPRC
NT5C
PMEPA1
C6orf226
FUS
RNF114
ITGB1
PPP6C
DOLPP1
ITGBL1
ZCCHC4
EHMT1
ARRDC1
SYNC
PRSS22
MTCH2
DYNLL1
PRDM11
GRIPAP1
DDX46
ANKRD33B
DKK1
TSKU
DPP9
NOLC1
MARCOL
PDHA1
AXL
CYB5B
SLC35F6
PHF2
TPCN1
IQCD
SLC33A1
C21orf91
BRWD1
ZNF131
RPS14
LY6K
TTC16
PTRH1
PRDX2
JUNB
PPP5D1
CALM3
KRT32
UBE3B
KCTD10
FZD1
TMEM167B
NCBP3
SPRING1
RNFT2
GIPC2
MAFK
ZNF219
TMEM253
NUF2
TBC1D13
LMNA
VDAC2
ARID5A
ARL6IP1
MVK
CD59
ZER1
ZC3H10
RPL41
ESYT1
JRK
MAP3K7CL
RALY
HOXC11
HOXC10
MMP24OS
MMP24-AS1-EDEM2
EIF6
SOCS3
PDZK1
HES1
S100A10
C19orf33
MTRR
FASTKD3
DHX8
ARHGAP17
NOCT
RHOV
MARCHF8
CALM2
KRT80
TPRN
TMEM203
NDOR1
ETV6
CDKN1C
ATF3
NEDD4
FBXO46
PMF1-BGLAP
PMF1
MET
PEX3
ADAT2
AFF4
PPP1R11
POLR1H
CCN5
TMEM18
MBNL1
SRPRA
MCTP2
GPSM1
DNLZ
CARD9
MANSC4
KLHL42
CHCHD5
ZFP64
C1orf116
INPPL1
FOLR2
XPO7
DOK2
WDR25
WARS1
IQCM
KLF4
NSUN4
DPY19L4
MAMDC4
AJM1
KLHL15
FUT11
CHCHD1
TINAGL1
DIDO1
TOR4A
PIP4K2B
WWP2
SPINT1
PPP1R14D
PFDN4
TAMM41
VPS13C
C2CD4A
ERI1
LIFR
EFCAB2
TARDBP
RNPS1
ASH2L
PAIP1
SEPTIN7
ITPRIP
PDE6D
COPS7B
PLIN3
SLC20A1
PLEC
GRAMD2B
CLCF1
HRH1
LPIN1
HEMK1
C3orf18
USF1
TSTD1
GLIS2
SDE2
DOK3
DDX41
SSTR1
EDNRB
U2SURP
RXRA
IL1F10
YJU2
RFESD
CA10
PHKA2
USP36
CPA2
NCOA5
RRNAD1
ISG20L2
NFATC2
METRN
ANTKMT
WDR5
HAGHL
CCDC78
NDRG1
ELF3
LANCL2
BZW2
ANKMY2
SURF4
ECT2
INKA2
DDX20
KIF27
RPL5
MB
ZNF503
ACBD6
NTSR1
CHD2
PTGER4
DTWD2
ARMC1
HIBADH
GUK1
GJC2
MRPS10
MSTO1
SNAI2
C11orf91
UBQLN1
SUPV3L1
STK35
MRPL21
IGHMBP2
VPS72
PIP5K1A
SMAD7
GATB
TADA1
TPRA1
LRCH4
FBXO24
CREM
PLAAT2
HPS6
ARMH3
TGIF1
TPM4
TTC32
TMEM41A
EIF4A2
ERICH4
DMAC2
RMI1
HNRNPK
UGT3A2
SPOCK2
NUP214
DNAJC16
CASP9
NDUFB8
HIF1AN
ZNF774
LOC100130520
CD300H
GIPR
COQ7
PCBP2
EDN1
GNG11
GNGT1
H2AX
DPAGT1
HMBS
EPAS1
LAMA5
DICER1
E2F8
DCLRE1B
AP4B1
OLFM1
NDUFS7
ACOT1
SSBP1
SKA2
PRR11
SMG7
PPP1R10
MRPS18B
ATAT1
CYP20A1
MUC13
WDR53
FBXO45
HACD2
BUD13
GRAMD1C
CYCS
FCHSD2
LRP6
CCDC97
UQCRC2
SLC25A45
FRMD8
ANKRD36C
ZFX
LEMD2
SCYL3
ZFPL1
TMEM262
CDCA5
THG1L
STAP2
MPND
TIAM2
ZC3H7A
PCIF1
CENPF
EPC2
SRSF3
XXYLT1
DDB2
UMPS
STARD7
ALOX5AP
EIF4G2
GTF2IRD2B
GTF2IRD2
HKDC1
CABLES2
ATMIN
TACC1
ADGRF1
TARS2
KDM5C
NUDT9
TOR1A
MTMR11
RAD23A
CALR
CCNL1
PSME3
BECN1
RBM14-RBM4
RBM14
MBNL3
ALG10
ATP13A3
ZDHHC6
VTI1A
NFE2L2
POLE3
C9orf43
ALAD
PUS10
PEX13
ALDOA
TLE1
RAD51AP1
C12orf4
C18orf63
RCAN1
HASPIN
SMC3
OAZ3
NECTIN3
VPS11
SRSF11
HNRNPD
LRRC40
SLC5A3
MRPS6
SLC25A53
FAM199X
TMEM9
NME1
KLF10
PTPRO
EXD1
CHP1
MAPK8
RCC1L
ARAF
NARF
CYBC1
USP21
PPOX
CCT5
ATPSCKMT
GALNT10
C2orf42
C22orf39
TMEM79
SMG5
LAMTOR1
ANAPC15
BAZ1B
DCTN4
FAM110B
SLC35A2
PIM2
TP53I3
SF3B6
FAM228B
WSB2
TMED9
B4GALT7
FURIN
THUMPD1
USP9X
AKIRIN1
AP3S1
PARVA
TMEM170A
ABR
PPP2R3A
KLF9
FAM193B
SDC4
SLC6A9
PLCXD2
PAXIP1
MMP12
NEDD4L
BBS1
PIH1D2
NKAPD1
EPRS1
PTCD2
MRPS27
MICAL2
SUMF2
TMIE
ALS2CL
STARD13
HDAC6
ARID2
SIDT2
PRSS33
ELOB
RWDD1
RNASEK
C17orf49
COL16A1
SMAD3
MED23
UNC5B
SYNRG
SMARCD1
ZRANB3
R3HDM1
CCDC124