ChIP-Atlas: Target genes

Potential target genes for CPSF4

Query protein: CPSF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652959 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF4's Target genes

◢ CPSF4: Average

◢ SRX13652957: HeLa

◢ SRX13652958: HeLa

◣ SRX13652959: HeLa

◢ SRX13652960: HeLa

◢ CPSF4: STRING

KMT2A
SNX12
FRG2C
DUX4
ARL4D
DRAP1
C11orf68
LEKR1
ZNF76
GAS8
ZNF143
TUSC2
HYAL2
HYAL1
CYB561D1
ATXN7L2
HSPE1-MOB4
HSPE1
HSPD1
POLR2J3
GDA
HNRNPA2B1
CBX3
IL7R
DAGLA
SNAPC1
MTRNR2L1
NUP160
TM4SF1
HHIPL1
CCDC85C
KRT10
ARRDC4
WDR74
STX5
PDXDC1
C11orf86
LOC102724770
DGCR6
CSGALNACT1
FAM53C
CDC25C
ATG16L2
ALDH18A1
SLC39A10
ZBTB38
KRT34
PDE4DIP
FRG2
SLC35E2B
SLC39A13
FAM72C
FAM72D
WDR70
NUP155
WASF2
KCNJ15
SRI
OR10D3
PADI2
DNAJB12
OTULINL
SETD1A
ORAI3
SMIM41
ATG101
ZC3H6
RPN2
MROH8
NNMT
PSMC3
ZNF687
CUL2
FOS
OLFML2A
NR6A1
CD59
FAM72A
STRBP
FHL2
GLIS1
LIPK
ZNF408
ARHGAP1
SNX15
XPO7
DOK2
NUDT3
KCNK4
GPR137
BAD
NR4A1
ZG16B
YY1AP1
DAP3
ATAD2
FAM72B
PDCD6
MYO9B
HAUS8
GKN1
DGAT2
CARD16
TSC1
GFI1B
TM4SF18
METTL25
CCDC59
HARBI1
ATG13
DKK1
SPRING1
RNFT2
FAM156B
FAM156A
NEK2
GTF3C5
RHCG
TFAP2A
RASSF9
DDX17
RNASEH2C
KAT5
TSR3
GNPTG
TBL1X
TBC1D2
TSN
COX20
ATR
PAIP1
KLRC2
LOC388282
KIFC3
TEAD1
BCAS1
PRSS38
MRPL48
ATF3
ISY1-RAB43
ISY1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
WDR43
TOR2A
KLF1
GCDH
DNASE2
RALGDS
RAB22A
GYPC
WNT10B
WNT1
TEX12
IL18
RAPGEF1
CDK5RAP2
MTCH1
PRKAG2
TMEM41A
ERCC1
LRRC37A3
BRIX1
DNAJC11
TRAPPC9
TTC32
PRR5L
COMMD9
MBNL1
MT1HL1
PDK2
USP15
FGGY
NDST2
CRBN
GNAS
ITPK1
TSR2
C5orf51
PHKA2
BRPF1
ITGB5
EIF3C
SFSWAP
EIF3F
SH3BP4
KRT31
RELA
CD55
VAMP2
PER1
UBE2B
CDKL3
USP36
CALM1
PIK3R3
MARCOL
LOC102723996
ICOSLG
TBC1D13
EIF2D
CDON
WDR13
GFM1
BCL3
SEPTIN7
NUF2
UBB
MAS1
C1orf174
WARS2
CD22
GIPC2
PSMA7
PDZK1
ARL8B
DYNLT3
LAMP1
KLHDC10
FUS
CYCS
TBPL2
NTMT1
C9orf50
HNF4A
BIRC3
IBA57
NADK2
STPG3
NELFB
FAM166A
MAFK
CYP1B1
MAOA
DDX47
PCBP2
JRK
SLC25A25
NAIF1
LANCL2
EEF1AKMT3
CALM2
SUMF1
IER3
FLOT1
METTL1
CYP27B1
C1orf198
NYX
BHLHE40
TSFM
MRPL42
ARID3B
TIMM22
KRT80
PPDPFL
DICER1
RETREG1
RIPOR2
HRH1
PMVK
TES
CPA4
MRPS16
DNAJC9
SLC33A1
PRDM10
RRP15
PPP1R13L
POLR1G
HAX1
SSNA1
ANAPC2
GIPR
C21orf91
SDE2
ZNF674
C11orf91
EFCAB14
SLC25A53
FAM199X
UBXN8
GSR
USP2
PPL
TGFBR2
POLG
TPD52
TRMO
RPS14
FOSB
SAMD9
TADA1
DYNLL1
ATP6V0C
AMDHD2
TMEM250
PSG1
TXNIP
ZER1
SSBP1
KRT86
CDIN1
ZNF131
DUSP5
BIRC7
KRT32
IRAG1
HEG1
KIF1C
INCA1
CAMTA2
EIF4A2
NAGPA
GPRC5A
UBIAD1
FAM149B1
ECD
CDCA7L
TCAF2
VPS33A
CITED4
ASB6
GCLM
RCE1
RARRES1
BAZ2A
OGA
CEP295
TARDBP
TMC5
ZSWIM1
SPATA25
NEURL2
CTSA
VSIR
MFSD2B
IKZF3
TIGD5
EEF1D
DOCK5
SCAND1
CSRP1
CHMP7
CCL28
PRKCZ
RPL26
KRBA2
PTPRB
LMNTD1
PARK7
LRP6
RBM48
PEX1
INA
SLC8A1
PER3
WASHC2A
PPIB
CLMP
SPNS1
LAT
DPH7
COA6
LRRC20
TRIM55
DISP3
AVPI1
LHFPL2
UQCRC2
DYNC2I2
STK17A
ASH1L
NEDD4
ZNF219
TMEM253
STAT5B
FAM102A
NR1H3
ACP2
SPINK1
EAPP
MAP3K7CL
FBXO4
ARAF
HAGH
FAHD1
AKR1B1
KAT8
BCKDK
TMEM9
AGMO
PCIF1
IFT52
TCP11L2
PDE4D
NFX1
KIF21A
ICE1
AURKAIP1
SHC1
PYGO2
PBXIP1
LOC101928120
RRN3
MFSD12
COQ7
ZNF668
ZNF646
EED
TEX2
AAAS
PIP4K2B
UBE3C
RIC3
TMEM132A
ETFBKMT
OSMR
PDK4
GUK1
GJC2
EDN1
TPRN
TMEM203
NDOR1
SOWAHC
SEPTIN10
MRPL44
MTRR
FASTKD3
SIDT2
DEDD
ATF7-NPFF
ATF7
EIF4G2
LIPC
TAF12
TMEM185B
OSBP2
NDUFS3
KBTBD4
FAM180B
HES1
FRAT1
FAM133B
U2AF1L5
U2AF1
TEKT2
ADPRS
ATP13A3
PTDSS1
MTERF3
FZR1
DOHH
ITGB3BP
EFCAB7
CFAP20
NDUFAB1
RHEBL1
KMT2D
MIDEAS
PRC1
SRPRA
ATXN2
H4C12
H4C11
H2BC15
H2AC15
PKP1
WASHC2C
USP49
TTC33
COPS4
CETP
NIBAN2
NBN
KNTC1
MYL12A
MYL12B
ZSCAN32
ZNF174
SECISBP2
CKS2
SSU72
IL24
TRIP13
BRD9
PCCB
GABARAPL1
PRPSAP1
NDUFS7
ING4
STX16
H4C14
H3C15
H3C14
H2AC19
H2AC18
POR
ZNF335
RAD51AP1
C12orf4
RIN1
BRMS1
PPP5D1
CALM3
NME1
MARCHF6
DOLPP1
ZC3H7A
TMEM222
FBXW2
CNTRL
C5
CACTIN
UBE3B
KCTD10
UBE2V1
SRCAP
LOC730183
COG2
CLPB
DBNDD2
PINX1
EBAG9
SLC35E2A
MTBP
MRPL13
DAP
CPT1A
LPIN1
AP3S1
ATP5MC2
H4C15
CLTC
RAB27B
THAP12
GVQW3
PPP1R9B
GOLGA1
HSPA9
TXNRD1
GBA
OAS1
RBM8A
PEX11B
PSMD5
GTF2H3
EIF2B1
GTPBP8
CLDN4
PRKCSH
CCDC151
S100A13
S100A1
CHTOP
RRNAD1
ISG20L2
PRDX4
ASB2
PRKCI
STX1A
ISG20
RPAP3
NT5C2
ATL2
PAQR8
UBE2I
PMEPA1
PLEKHA8
FKBP14
AARS2
RFX2
ZNF367
CCDC68
PGBD2
SLC35B1
NIFK
NCOA5
CYP27C1
POLA1
ZNF212
GRIPAP1
EPC2
FAM25G
FAM25C
ANXA2
IQCH
AAGAB
CCDC97
SLC25A45
FRMD8
C8orf33
NEGR1
TDRD9
ATP5MPL
TTC9C
HNRNPUL2
YIF1B
KCNK6
AMOTL2
PACSIN3
ARFGAP2
NARF
CYBC1
MTCH2
MRRF
FKBP1A
EPYC
TATDN3
NSL1
PLCXD2
PRSS22
USP42
PRMT3
TMEM199
SEBOX
POLDIP2
GGA1
FLYWCH2
PDE6D
COPS7B
EFCAB2
RPL5
COA1
CENPF
POLR3B
SRSF4
USP11
PTGER4
CDKN1A
TOX2
C19orf33
CAPN2
STAT3
NUDT9
GIT2
ANKRD13A
CHD2
USP9X
NR2F2
P4HB
FAM110B
ZBED5
NFE2L2
TUBB4B
SLC34A3
ARHGDIA
HMCES
SCAI
RARB
ZFAND3
TRIB1
PISD
MRPS23
MTSS2
HASPIN
STK19
LOC110384692
DXO
C4B_2
C4B
C4A
MTMR12
LIMA1
IQCM
UBQLN1
CEP63
ANAPC13
TPR
ODR4
ITGB1
ZDHHC6
VTI1A
SENP1
PFKM
ANKRD36C
MRPS10
PRSS33
ELOB
PGAP2
PYGB
FCHSD2
EIF1AD
CST6
BANF1
AP5S1
IARS1
YTHDF2
MRPL3
TMEM14B
SCHIP1
ITPRIP
PEX5
RNPS1
TRMT61B
RAC3
DCXR
ZNF341
RAPGEF3
STK4
SLC48A1
LARP1
CAPNS1
SPRR2E
QSOX2
ITGA10
LETMD1
YARS1
S100PBP
THEM4
RAB5B
PMEL
CDK2
GABPB2
ZNFX1
MLLT11
TIMM10
SMTNL1
TTC31
CCDC142
GTF2IRD2B
GTF2IRD2
DOK3
DDX41
C5orf46
CPLANE1
CDIPT
TMEM107
MSTO1
TAMM41
TRUB2
COQ4
TSEN54
LLGL2
CASKIN2
ARID1A
VIRMA
PARVA
WDR5
CPS1
ENSA
TTI1
RPRD1B
PEAR1
RPS26
INAVA
TRAM1
ECT2
MUC13
PTGES
RCOR3
HMG20B
NOL8
CENPP
NDUFB1
CPSF2
FBXO46
CCDC124
SYT5
CLPTM1
APOC2
CCL20
INPP4B
FOSL1
CCDC85B
LIFR
SURF4
PPP4R3A
MYPN
KDM4D
CWC15
PTGES2
AMN1
EIF2S3
RHOT2
RHBDL1
TNRC18
LOC100129484
SNX19
LZTR1
WDR25
WARS1
SPATA46
C1orf226
SERTAD4
SREK1
CLN3
APOBR
TMEM267
CTDSP1
SDHAF3
MEF2D
KLF10
CLUH
WASHC5
NSMCE2
NCBP2AS2
NCBP2
MGLL
MLLT1
TAGLN2
USP21
PPOX
POC1A
ZNF358
MCOLN1
QRICH1
POLD2
ADTRP
ARID5B
SLC9A1
AMOTL1
CD79A
ARHGEF1
GIPC1
TIMM17B
PQBP1
TMEM9B
MRTO4
EMC1
MAP3K1
ETV4
DDX18
ETS1
VPS37A
CNOT7
GPC6
BMS1
SCAF11
CCDC174
BRWD1
DRGX
MRPS30
MRPS28
EPSTI1
POMT2
GSTZ1
S100A16
S100A14
BACE2
SLC25A3
ZYG11B
CDK1
RHOF
SUPT7L
SLC4A1AP
PRRC2A
AIF1
WEE1
NCDN
KIAA0319L
HNRNPAB
ZRANB3
R3HDM1
MAPRE3
OXCT1
HSP90AA1
CLIP2
ANKRD35
SLC41A3
CD1D
INTS7
DTL
DDX46
ASCC1
ANAPC16
RACGAP1
JAGN1
CIDEC
RMI1
HNRNPK
FZD1
LRRC8A
KYAT1
ARFGEF2
USP12
DDX59
CTNNAL1
SCYL3
SELENOS
POLR2J
UGT3A2
SH2D3C
CDK9
SMIM12
CCDC200
KATNB1
POLR2D
LMNA
PXK
NFATC2
OAZ3
SRFBP1
TGFBRAP1
C2orf49
MTF2
DGKZ
MLH1
EPM2AIP1
MELTF
RPRD2
TSKU
PFDN4
PTPN6
C12orf57
DPP3
BCO2
ZBTB11
RPL24
BCL9L
NKD2
USE1
SNRPD1
THUMPD3
TNPO3
PTP4A1
AGAP11
ADIRF
CXorf58
WWP2
C18orf63
PRSS27
ATN1
CARS1
OGFOD3
HEXD
PHRF1
PRRC2B
FEM1A
DR1
PAXBP1
S100A2
EIF3B
MMP3
STK40
SUB1
POC5
UBC
GLIS2
CWF19L1
TACC1
STOM
MDM4
VCAM1
PLIN3
PPP1R18
NRM
SQSTM1
ABR
ADK
RPGR
TOP3A
SMCR8
GPBP1
MFN2
NUDT13
SLC16A5
JUND
IQCN
RPL37
CARD6
THUMPD1
TCF3
NOCT
SRP9
SNRPG
PDF
NIP7
FAM136A
COG8
DHX35
ATXN1
RNF103-CHMP3
RMND5A
COPS7A
CCNT1
PTPN14
KRT17
TTYH2
RPL38
RICTOR
RNF7
ZNF620
EPRS1
SH3GL1
CHAF1A
TMEM129
TACC3
SLBP
ERCC2
CDKN2AIP
MATN1
ANK3
PHF19
RCAN1
NSFL1C
SPINT2
CEP126