ChIP-Atlas: Target genes

Potential target genes for ZNF558

Query protein: ZNF558
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX16498354 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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ZNF558's Target genes

◢ ZNF558: Average

◢ SRX2423956: 293

◢ SRX2423957: 293

◣ SRX16498354: Hep G2

◢ SRX16498355: Hep G2

◢ ZNF558: STRING

NPAS4
XKR7
IQSEC3
LIN28A
RAB37
HTR5A
FAM24A
NKX1-1
INSM2
SMIM17
BARHL1
L1CAM
CELSR3
RANBP3
WDR74
CPLX2
KCNH7
GLRA1
CHGB
LHFPL5
SIGLEC10
FRG2C
DLGAP3
RHOG
HPCA
SCRT1
MTRNR2L1
MTRNR2L2
MSH3
DHFR
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
LRRC8D
COX5A
NTSR2
EPHA10
SCRT2
GDAP1L1
KLF11
NPPB
RTBDN
SRRM3
SNAP25
MAPK8IP2
PTPRS
MTRNR2L8
CDIP1
VGF
DUX4
KATNA1
CHRNB2
MYT1
OGDHL
CCDC92B
SPOP
LEMD3
KDM3A
UBE2Q1
MMP24
RFC1
UNC80
SLC7A6OS
PRMT7
PMS2
AIMP2
PCNA
PTMA
CABP7
RBM28
N6AMT1
PMVK
RNF130
HBQ1
HBA1
ABCC6
GCFC2
PTPRN
HES3
ZPBP2
IKZF3
HMGA1
HDAC2
KCNK12
EVI5
SCAMP5
SEZ6
AATF
VWC2L
USP14
SLC12A5
ANKRD36
ANK1
SLC39A3
FN3K
ANAPC11
ALYREF
AHCYL1
CENPA
USP30
SVOP
CHGA
PIK3R3
ZFYVE27
MARCHF4
DLL3
STMN3
RTEL1
ANKRD36C
NRSN1
KCNH6
TIGD1
EIF4E2
RABGGTA
TPH2
DNAJC6
PDE1C
RNF187
SCGN
ARFGAP3
PGRMC2
RETREG2
CNPPD1
SYP
STK25
PCDH8
RAD54L2
CERS6
CYP21A2
GRM1
H4C12
NOC3L
TMEM181
CCDC200
ZNF337
USPL1
HMGB1
RESP18
PGBD5
LRRC59
NDUFAF5
ESF1
DTD2
RPL31
ENO1
ACAD9
LOC112694756
NSUN5
CTDSPL
FRG2
CHRM4
TOMM5
SPATA25
NEURL2
CTSA
FMNL3
GTF3A
SLBP
SUGP2
ARMC6
PUM2
E2F6
SLC25A36
RSPH3
CEP295
SEH1L
BCL7B
FBXL16
LTB4R
CIDEB
WDSUB1
TRIM67
SLC9A1
RNF103-CHMP3
RMND5A
NCOA5
POLE4
FANCL
DNAJC11
MFF
TMX3
CCDC102B
SLC25A10
KCNC3
ACTL6B
ABCA3
CRH
SST
ODC1
SF3A2
PLEKHJ1
PRKDC
MCM4
TINF2
UTP11
MRPL3
CRLS1
H4C11
STX18
TTC7A
MCFD2
AKAIN1
POLR2J3
ATP6V1B2
SEC14L1
TASOR2
PSMD7
FAM177A1
CDCA7
TMEM268
CNPY3
ELAVL3
WDR36
FOXRED2
NSFL1C
THOP1
SGTA
PSMD3
SAYSD1
NR1D1
ZFR
HDAC4
SLC7A14
CLVS1
SCAND1
DHDDS
PAQR4
KREMEN2
HS3ST2
ACSL6
BAIAP2
ZCCHC7
DDX1
ENOSF1
PDE4C
NUP62
IL4I1
ATF5
GINS1
SOS1
TTPAL
AP3B2
TCAIM
CACYBP
COPS6
FERMT1
TUBA1B
PHF1
ZNF473
VRK3
TMEM179
AKAP10
CMTR2
NEUROD1
ST8SIA3
EFCAB13
IPO4
AAR2
MRPL44
INTS12
GSTCD
AIP
USP37
CNOT9
STX16
PET117
KAT14
PLEKHM3
PRMT8
TBC1D13
YPEL1
LAMP1
CCDC107
PBX3
PPP1R3C
MFAP3
FAM114A2
SEZ6L2
ASPHD1
SCFD1
CFDP1
CDK5R2
TSGA10
ZNF292
NHLRC1
SGF29
RSL1D1
CLCN7
TRADD
HSF4
FBXL8
POLR3E
PPY
TEFM
NOL7
BICDL1
ATIC
C14orf93
GDI2
CPQ
GRIA2
GPR158
NPDC1
SLC18A3
CHAT
CYB5R4
KIAA0895L
EXOC3L1
KAT5
RMI2
RRP1B
HSF2BP
NOP56
WASHC2C
SLC25A21
SCAPER
CFAP65
STAT3
CDK5RAP1
TUBB3
MC1R
LDHA
TACO1
PEX3
ADAT2
UNG
ALKBH2
TSEN54
CASKIN2
EIF3C
SCAF11
LMCD1
EIF3CL
SLC44A1
CNTRL
C5
GLS2
MUC3A
MED23
GOPC
EIF4A3
PEDS1-UBE2V1
PEDS1
TBC1D15
DNER
TRIM44
SLC17A9
CCDC88A
HAAO
EPM2A
TK2
CKLF-CMTM1
CKLF
DNAJB2
WRNIP1
MYLK4
HECTD1
LTV1
E2F1
KRI1
CDKN2D
MPHOSPH10
MCEE
MTERF4
POLR2D
OSBPL8
NCAN
EZH1
TMEM186
PMM2
ASCC3
LRP2BP
ANKRD37
VRK2
ERMARD
PC
DIABLO
TMEM106B
KANSL3
FER1L5
HEATR5A
COMMD1
CCT4
CPNE4
CFL2
XKR4
JPH4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
IRF9
MIPOL1
GJA10
EIF2B3
LSM12
G6PC3
HHATL
MTHFD1L
EXOSC6
LUC7L
PROCR
PDHB
HCN2
GMCL1
ESYT3
DNA2
SLC30A6
METAP1D
AGMAT
PCSK1
HES6
DCP1A
GTF2H2
TOMM34
GJD3
H4C14
NRL
GTF3C3
TCFL5
PCK2
PTDSS1
MTERF3
PHF3
KCTD18
RBM45
PDE11A
RPL37A
ANKRD34C
ZSCAN30
RNASEH1
SLC16A3
WDR35
CEMIP
RRN3
RNF166
CTU2
NABP1
NMS
C6orf136
FRA10AC1
MTIF2
MAP2K2
EBAG9
UNC13A
HNRNPF
TMEM242
TRIP4
AARS2
MRRF
POLR1B
UBE2V2
LAP3
GXYLT1
NBPF1
TTC9C
HNRNPUL2
SLC45A4
RAB5IF
EPB41L4B
PNPT1
EAPP
ZNF219
TMEM253
ABCB6
GET4
TM9SF1
OGFOD3
HEXD
DBI
C2orf76
UNC50
COA5
BUD13
MLLT1
WTAP
SOD2
ROMO1
TMEM169
PECR
VTA1
NMBR
APMAP
TAOK2
PLD6
TUBGCP3
H4C2
H3C2
SPHK1
NT5C
G2E3
PREPL
CAMKMT
ENTPD6
EBPL
AURKAIP1
CSE1L
CUL9
YDJC
PGD
CCDC116
RUNDC3A
TRMT6
MCM8
MRPL17
EIF3B
RTN2
PPM1N
H3C3
H2BC3
TENT4B
POGK
GGA2
SNRPB
DHRS4L2
MIEN1
GOT2
CCNC
CTNNB1
MRTFB
THNSL1
NUF2
NAGK
HM13
HSPE1-MOB4
HSPE1
HSPD1
ZNF341
GTDC1
TMEM107
PDE6D
COPS7B
GEMIN2
MRPL38
TASOR
ANKAR
PTP4A2
TRPM8
STK4
MARCHF7
RPS15
EXOC2
THUMPD3
SPTSSA
ABT1
SNAP47
JMJD4
NLE1
H1-2
SMG1
PSME3
PYCR1
NME1
CACNA1B
MIA2
TIMM23B
PARG
C1QBP
SETD6
OPRM1
NHEJ1
ZNF23
LRRC37A3
FANCA
DNAJA2
HNRNPDL
ENOPH1
RBM12
CPNE1
ATP5F1E
RBL1
TATDN3
NSL1
NCK1
BCKDK
SLC25A13
NET1
RAB11FIP4
ATRN
NDUFS7
ZMYND10
NPRL2
CYB561D2
TSPAN10
NPLOC4
TAF3
TEX46
KDM1A
TIMM22
PSMG4
DPP10
GUSB
PYGB
CLU
RANBP2
SLC6A12
ERGIC3
RIOK2
BIRC6
MSH5
CLIC1
RIF1
AGPS
DPY19L4
PRMT5
MOB4
BRMS1L
LONP1
CATSPERD
EFHD1
MTHFD2
TBCD
SMARCAD1
ZC3H6
SLC9A8
KLHL9
CCDC88C
RAD50
COCH
CAB39
TXLNA
NEMP2
HEXB
FOXJ3
MRPL45
CSTF1
AURKA
ZKSCAN2
LCLAT1
MRPL52
REX1BD
KCNH1
CEP131
BNIP3
RPL27
SNRPB2
FAM227B
DTWD1
RNPS1
EIF2D
MRPL21
IGHMBP2
PSMF1
GDAP1
SUPT3H
HBS1L
ATCAY
ZCCHC3
CLUAP1
C16orf90
C14orf119
ACIN1
METTL9
NOB1
MZT1
BORA
TRA2B
IPMK
CISD1
NSG2
BSN
TMEM177
MARCHF8
HLF
RMND1
ARMT1
ADNP
RIOK1
CAGE1
ZFPM1
ZSWIM7
TTC19
RAB18
MLH3
R3HCC1
FAAH
E2F3
MRPL58
DHX35
MNAT1
LTB4R2
DHX40
PPARD
OLA1
CCT2
NCOA3
PCNX4
SIRT4
HEXA
GPR78
SIRT1
RINT1
RBM34
MOGAT1
SMIM4
RAB4A
NT5DC2
PPM1G
IGF1R
HLCS
TTI1
RPRD1B
MCUR1
IDH3B
PDP2
C10orf88
DCLRE1C
PKP4
CCDC148
SOGA3
MEIG1
WDR43
ERCC5
RPL10A
ZFP1
FUS
NCL
ABHD12
PTGES3
CCNL1
FAM53C
CDC25C
JPT1
GPR6
C19orf53
FAN1
STAT1
SRSF6
ATF7IP2
RPF2
DDX18
ZBTB9
USP42
SPAG4
NUBP1
ADSL
HBM
HBA2
RPS7
FAM187A
EFTUD2
CCDC103
DDX19A
C10orf95
ANKRD36B
CDK5RAP3
HHIPL1
CCDC85C
FITM2
ZNF843
SPRYD4
NEU4
VPS16
PCED1A
MED31
C17orf100
PAQR7
EGR4
ARIH1
ANO10
ABHD5
HTR1A
PSMB5
HDDC2
H4C15
MSL2
AHI1
YTHDF1
ZNF84
ZNF131
NFKBIA
CHEK1
MSH6
SDCBP
SNAI1
PTPN2
GPCPD1
EPHX2
ACTR3
COPS7A
ABCF1
DDX19B
TXNDC5
MTF2
DHRS4
MYORG
C9orf24
UBAP2L
C1orf43
TEKT2
ADPRS
FBXW8
TRNAU1AP
WDFY1
SMIM24
POLR2C
SMARCAL1
TBCB
POLR2I
OVOL3
STXBP6
ID1
AKAP11
KCTD5
NANP
TEAD3
NFAT5
PHF20
THUMPD2
CITED2
POLR2J
NR1D2
NKIRAS1
MRNIP
AARS1
DRG2
DPY30
CDC16
ZP3
ARHGDIA
AEBP2
CBFA2T2
RUVBL1
USP4
TMEM230
PPP4R3B
EEFSEC
MRM3
GLOD4
WASHC4
UBE2N
TM7SF3
PRKD3
FOCAD
STK16
GLB1L
ZNF628
SHQ1
REV1
PPM1M
DYRK4
SOST
SNRPD1
TRPM3
TRMT2A
SYN1
RANBP1
PPP1CB
POU4F2
PDS5A
OSTM1
FBLL1
ERN1
CTXN2
MAPKBP1
DCUN1D5
TRIM8
ACSL3
TIGD2
PRLHR
LENG8
FOXQ1
WFDC3
DNTTIP1
SLC35A3
TMEM18
HNRNPC
ASAH1
UBE2D3
CISD2
SYNDIG1L
DNPH1
DDX50
VPS29
RAD9B
DHRS2
MYH7B
GSS
SAMD10
PRPF6
RWDD3
CCNJ
DCAF11
RBM39
SRP68
GALR2
NADK2
XPO5
SUPT4H1
POLH
LGALS13
CWC25
NDUFAB1
EDC4
NOP58
CC2D2B
WDR89
POU4F3
INSR
MRPS25
BMS1
KNOP1
COG7
PSMA1
PDE3B
CCAR2
C8orf58
COMMD2
OSGEP
APEX1
DGUOK
MAZ
XYLB
PRRT2
SMIM8
RXRA
DIXDC1
CRYAB
H4C3
H1-6
SDHAF3
CRNKL1
CFAP61
C2CD5
RTF2
AGGF1
ARL4D
PRKRA
PJVK
ALG8
LRRFIP2
NDUFS3
KBTBD4
ZGPAT
ARFRP1
FAM83D
CBWD5
CBWD3
KCNB1
PDXDC1
SLC36A4
GRM4
C16orf72
HIRIP3
NFATC3
EEA1
S100A8
PLEKHG4
MARCHF11
C5orf24
EXD1
CHP1
TXNRD1
CTDP1
MRPS5
MDP1
CHMP4A
DR1
ERCC6
ZNF326
SGK3
NSMF
HSD17B1
DOCK6
HIBCH
NME6
IMPA1
TIMM44
NRF1
GFPT1
FAM163B
AGK
ACTR5
HARS2
HARS1
PDE12
GZF1
CFAP20
SURF6
NXF1
MARCHF9
CDK4
LRIF1
MAP2K7
HLTF
RNF114
PAXBP1
PSMD12
SMIM26
STT3B
THUMPD1
BIRC5
MMAA
NAPB
YIF1A
VDAC3
TMEM151A
SNTG1
MTCH2
MEAF6
DUSP28