ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: CDK9 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◣ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

WDR74
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DDX23
MTF2
IFRD2
HEXIM2
LAMP1
KMT5B
CCNL1
CTNNB1
CLTC
ZC3H6
FEM1A
TBL3
DSTYK
COPS7B
EIF2D
CALR3
C19orf44
CDCA3
TMEM41A
STX18
TIMM21
FBXO15
BRWD1
UBC
MRPL21
IGHMBP2
NCBP2AS2
NCBP2
ABCF2-H2BE1
ABCF2
DCP1A
ATAD2
NOTCH2
PPP5D1
CALM3
TSNAXIP1
RANBP10
PPRC1
UNK
PAFAH2
GSPT1
POLR2J3
TMEM11
SOD2
WTAP
TMEM199
POLDIP2
WDR53
FBXO45
TMEM222
SPATC1L
CALM1
GATB
FOXJ3
CLPB
OPA1
SSNA1
ANAPC2
RBL1
CCDC88A
TSN
NDUFS7
TOMM22
SPNS1
CALM2
SEC13
MRM3
LRP6
GLOD4
CYCS
AURKAIP1
ZSCAN22
MRTO4
EMC1
ORMDL3
TCF3
RPL8
COPS8
KBTBD7
NDUFS3
KBTBD4
NMNAT1
LZIC
TIMM22
UBB
CCDC77
STX16
NUP214
SMN2
SMN1
BTRC
CNOT1
PEMT
TMEM115
KMT2D
MED23
DOHH
CFAP410
TRIP4
C16orf91
POMZP3
ZNF337
KPNB1
SCAF1
SYMPK
CHMP4B
ST3GAL2
CTDP1
RPS3
MTERF4
BOD1
AP2S1
IST1
WASHC2C
GSTA4
TSSC4
PSMD3
PEX3
ADAT2
PRCC
FOXA3
CDKL3
RPS20
AHCYL2
PNKD
SNX17
EIF2B4
AAMP
ING3
TSC1
GFI1B
HTRA2
PA2G4
GTF2H3
EIF2B1
HMGB1
ADPGK
PHIP
TCEA2
FRA10AC1
CKS2
HEXA
ZNF212
WASHC2A
SMPD3
PEX26
CLEC16A
NUF2
NAGPA
THRAP3
KCTD9
CDCA2
MRPL24
DDIT4
KBTBD6
RPL22
UBE2B
USP30
ZFAND2A
KDM5A
NUDCD1
TTC13
ARV1
TRIAP1
ZCCHC4
UBE2D3
PPP1R12B
ZKSCAN2
ZNF721
PIGG
NXF1
MED15
PKM
ATP5MF-PTCD1
ATP5MF
MCM7
AP4M1
RPS6KB2
ZBTB45
RPL18A
RPS28
NDUFA7
ATG14
OSCAR
NDUFA3
TOB2
MAF1
FAM207A
USPL1
SLC9A1
CRTC2
H2BC21
H2AC20
SCNM1
LYSMD1
INVS
ERP44
IPO11
TMEM127
CIAO1
OAZ3
KCTD5
MAD2L1BP
MICOS13
HSD11B1L
H2AC21
SCRIB
C8orf33
RPIA
PANK4
CDC25C
ZNF444
GTPBP2
NPRL2
CYB561D2
WDPCP
NOP14
MDH1
GRK4
GPAM
MAIP1
PPP1R12C
DNAJC11
RPS26
EIF4A2
DIP2A
DUS2
DDX28
FAM53C
TMTC3
CEP290
TRAPPC3
ZW10
CCAR2
CYP51A1
TNFAIP1
IFT20
PHB
BRIX1
SLC35B4
MAPKAPK5
ZNF384
RANGAP1
ATXN2L
UBR2
ALKBH3
C1orf159
MXD4
SRSF11
SMG5
RBM42
FUS
NME1
UBQLN1
LRRC29
MRPS15
TBRG4
NUP153
CUL4A
ZNF56
RLF
PSMF1
PGBD4
EMC7
KAT7
COMMD1
PINX1
MFN2
HMBOX1
BOD1L1
C19orf53
PSMD11
FBXW11
MRPS35
CCT4
KDM4B
DNAJA3
UBE2Q1
SLC25A19
DCAKD
ADNP
UBQLN4
LAMTOR2
NSFL1C
TAF5
HMGCL
GHITM
BANP
TOR1AIP1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ZFYVE1
TRIP12
FBXO36
PBLD
HNRNPH3
GID4
ATPAF2
CCDC146
PCID2
SPRYD4
LRRC40
STK25
INTS9
DPP9
MMACHC
VPS37A
CNOT7
RIC8B
LUC7L
AP2M1
DCAF10
NOC4L
DDX51
NMT1
TTC33
DOLPP1
ENDOV
CIC
SPTLC1
SP2
MRPL20
SLC33A1
ARHGEF12
ZNF420
ZGPAT
ARFRP1
PIGU
ZFYVE19
DNAJC17
AHCTF1
HNRNPAB
ACOX3
NTAN1
COMMD9
UCHL5
RO60
TEPSIN
NDUFAF8
TCF12
MRPL58
CSRNP2
EIF3F
RPL29
RCL1
IDH3B
LETM1
RBM6
MTMR2
BIRC5
DNAJB12
STAU1
ABRAXAS2
SECISBP2
LONP1
CATSPERD
TFPT
PRPF31
ARF4
RALBP1
TRMT44
SUPV3L1
SNAPC3
SMARCAL1
GTF3C5
HSP90AB1
GFUS
DDX1
H1-4
COQ9
CIAPIN1
SART1
RPL12
LRSAM1
ZFPL1
CDCA5
UBL7
H2AX
DDX49
COPE
GTF2I
PHF13
RCOR1
MRPS16
SNRNP70
FDPS
JOSD2
PIK3R3
HSP90B1
GTF2H4
COG2
ZNF749
DCAF8
ARHGAP9
ELOC
RAB5C
ZC3H10
MRPL39
CTU1
TSC2
NTHL1
WASHC5
SSBP1
NSMCE2
GABPB1
DESI2
TOP3B
BOLA1
RPS7
DCAF1
TRAF7
PARL
WAPL
MARS1
TMEM59
TCEANC2
NDUFV1
CAND1
IP6K2
CBWD5
U2AF1L5
U2AF1
TRAK2
STRADB
CHCHD3
RWDD1
CRBN
PHF12
SOX6
C11orf58
B3GALNT2
CBWD3
METTL25
CCDC59
VCPIP1
C8orf44-SGK3
KLLN
TTC4
COX7C
PNRC1
SF3A3
SLC7A6OS
PRMT7
SLC24A1
PSMD2
MCU
CANT1
ADPRS
WDR87
SIPA1L3
TRMT61B
SLC3A2
THYN1
ACAD8
DPY19L4
IPPK
PABPC1
SKIV2L
NELFE
PLEKHM3
BRF2
ATF4
PRKACA
RPS19
BICD2
USP48
METTL9
GUSB
TMEM242
POLG
SMIM13
PTEN
SIRT2
NFKBIB
MANF
SSR3
RCOR3
ZNF500
TARBP2
FAM149B1
ECD
ZNF148
PSMD4
TIMM13
NDUFB5
MRPL47
THOC6
HCFC1R1
FAM228B
CCDC90B
RPS16
RUVBL1
UBE3B
KCTD10
NOLC1
GFM1
COQ7
RPLP1
TRUB1
VIRMA
ASXL1
TMEM217
TBC1D22B
SERBP1
SESN1
CMTR1
TACO1
UBA52
PCBP2
COA6
TFRC
NKIRAS1
EIF4A1
CDKN2AIPNL
DNM1L
POLR2E
NLK
RFXANK
BORCS8-MEF2B
BORCS8
ZC3H3
H2BC18
ZER1
H4C14
CFAP20
HAGH
FAHD1
COPS7A
HPS4
RPLP0
NDUFAB1
LARS1
CAPN10
H4C11
BMS1
NEURL2
CTSA
CACTIN
BUB3
XRRA1
SPCS2
B4GALT7
SRP68
KAT8
SPRED1
WBP2
ATRIP
REXO1
BUB1B
ACTR1A
USP15
PARK7
ZNF518A
CLP1
TMEM230
H3C13
SF3B2
VCP
PHB2
FAF1
GTF2H2C_2
GTF2H2C
PTDSS2
CWC25
CBWD6
KMT2B
SLC4A2
SLX1B
SLX1A
BOLA2B
BOLA2
WDR25
WARS1
RNASEH2C
PALB2
DCTN5
RPL15
HIF1AN
MRPS11
MRPL46
ZFAT
MDM4
RANBP2
ZNF225
TIGD6
HMGXB3
SNRPD3
GUCD1
POLR3D
PDE4DIP
TEFM
WRNIP1
CFL1
DFFA
XPOT
EIF2S2
RPP30
SUMF1
CEP350
FBXO46
C5orf51
PTBP1
NOL10
CCP110
CHCHD6
ZFYVE28
SEC11C
RPL3
ZNF189
MRPL50
UBN1
GLYR1
CCDC150
SELENOH
TATDN3
NSL1
PHAX
SEC61A1
RPL23A
SPHK2
FBXO28
RAD23A
CDK8
C12orf43
CFAP99
WDR4
SRRD
CDK5
FAM156A
DGAT1
SMIM12
ZNF451
NCDN
KIAA0319L
SUGP1
MAU2
SRSF2
MFSD11
RAB1A
MRPL3
FAM156B
ZNF2
CASC3
PPIA
VPS33A
SDE2
H3C15
H3C14
PEPD
C19orf48
LRCH4
FBXO24
TMEM39A
CCDC124
IPO7
ZNF527
TMEM69
COMMD2
PANK3
HIRIP3
RASEF
TOP2B
RPL18
TOP3A
SMCR8
SFSWAP
RTF2
CNPY2
CLDND1
RPL6
SNAP47
SRSF1
CNIH4
KPTN
JMJD4
CAPN15
RTTN
EXOSC4
AP5Z1
ZNF805
ZBTB4
MRPL48
CCDC86
UBAC1
AKIRIN2
POLR2A
ABT1
TSFM
RTEL1
FANCD2
RAD54L2
CNOT4
SPRYD3
RPS3A
H4C12
DDX46
ZNF133
CDK5RAP1
SRPRA
WNK1
TBC1D22A
TIMM50
ATP5PO
TOR1A
MRPS23
ZNF335
ZNF595
SURF6
PKN2
DYRK1B
CCNC
GATAD2A
USP42
USP35
KCTD21
BOLA2-SMG1P6
MAGOH
SEL1L
FAM133B
RBSN
L3MBTL2
TMEM258
FEN1
EIF2B5
MRPL44
SCAMP3
CCNI
DRG2
TUBGCP3
HBS1L
KDM4A
AARS2
RPLP2
FASTKD1
H4C15
RPTOR
DUS3L
PSME3
GPBP1L1
IARS1
REXO4
CIAO3
EIF1
GPANK1
CSNK2B
FAM227B
DTWD1
SERP1
EIF2A
SERPINI1
PDCD10
TAS1R1
NOL9
MTR
DYNC1I2
SLMAP
PPP6C
HNRNPL
PDCD4
FBXW2
RERE
MON2
TMEM160
H2AC19
H2AC18
EIF5
SUFU
ZC3H11A
PPIL4
RAB5IF
MRPL4
C12orf73
VIPAS39
AHSA1
TFEB
NUS1
CLCN7
MXI1
PSMD8
DNM2
EFTUD2
CCDC103
TMEM186
PMM2
ECSIT
TVP23B
APTX
UFSP2
TBCB
POLR2I
LTO1
AJUBA
VPS50
HEPACAM2
WDR11
GARS1
CHCHD1
PCM1
EIF3C
BDP1
SUPT4H1
MIA3
ACAD9
MYLIP
TBCCD1
NDUFS2
VPS4B
POR
TMEM43
CHCHD4
PDE6D
EIF3CL
GTF2H2
TUBGCP6
SRP9
SNRPD1
ZNF554
EIF3D
NFYC
MAEA
CALR
STOML2
INTS1
RPGRIP1L
FTO
RAD52
FBXO48
APLF
ZSWIM9
LIG1
AKAP8
SH2B1
RFX1
WDR43
DHX33
ARFGAP2
NBPF1
PRDX1
RBM28
ZSWIM7
TTC19
UMPS
ATP5MPL
ZNF567
MRPL37
CYB5RL
ERLIN2
ZNF419
ZNRD2
FAM222A
THOC1
FAM204A
MRPL55
HUS1
ATG7
MAN2C1
SEPTIN9
NCOA3
LANCL2
ARNTL
VAPA
TXN2
FAM185A
MTMR9
SSU72
YWHAG
POLR3F
DZANK1
UBR4
GPR108
TRMT2A
RANBP1
EXO5
TSR1
SGSM2
PMPCA
ENTR1
PPP1R8
ADK
VDAC2
SESN3
PNPLA6
CHMP1B
EIF5B
POLE3
C9orf43
FAM193A
LRRC59
ZMPSTE24
EIF4A3
ATR
TUFM
DIABLO
MRPL11
CCNG2
TFB2M
CNST
WDR18
LMAN2
DNAJA1
YIPF2
TIMM29
ABCC5
GOLGA1
ZNF436
SNX27
SRSF6
EXOSC3
MRPL12
SCAMP4
ADAT3
DDX41
NUP54
TMEM248
METTL26
STYXL1
MDH2
GTF3C3
TMEM245
SAR1B
NDUFA10
MIS18A
INTS12
GSTCD
ZNF17
DDX19A
ZNF235
SNAPIN
CCNL2
CDK5RAP2
STK17A
PELP1
MTIF2
SLC44A2
ADSS2
NOM1
ILF3
THOC3
MTRNR2L8
NFXL1
MARCHF5
CPEB3
RPS15
ABCB8
UBIAD1
PPT1
HSPE1-MOB4
HSPE1
HSPD1
IPO13
LRRC37A3
TXNDC9
PARP2
SAP30BP
RECQL5
ATP5F1B
SRCAP
LOC730183
UBAP2
LZTR1
TAF15
KHDC4
TRA2B
NOL7
ASH1L
TMED9
SNRNP200
ZSCAN32
ZNF174
ZCCHC8
RMDN3
RNMT
FAM210A
NIP7
COG8
RPUSD4
FAM118B
EEF2
ARMH3
VKORC1
NABP1
C17orf75
TSPYL2
POLR2J
RETSAT
ELMOD3
JRK
RPS23
ATP6AP1L
C15orf40
ZNF718
SMPD4
MZT2B
DNAJB11
ZNFX1