ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741424 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◣ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

STOML2
WDR74
CDK12
TBC1D4
CCDC107
ZNF335
GTF2H4
UBE2V2
MTRNR2L2
CCDC200
PIGO
MTRNR2L8
SP2
VPS37D
PSMB6
ARHGEF1
TESK1
CLPB
SPAG8
AHCY
UBE2L3
PAXBP1
TFPT
PRPF31
MRPL45
UBFD1
EARS2
LOC730098
PRPSAP1
MTBP
MRPL13
CCNC
EIF3E
RMND1
ARMT1
KANSL3
ZBTB40
CLTA
RPL27
RBM39
NEURL4
NLRX1
NUDT9
RUSC2
TLN1
CREB3
NPR2
WDR43
PTPRF
GNE
INKA2
DDX20
SMG5
MELK
C9orf131
DLAT
TMEM41A
MED23
MRFAP1
CYRIB
PEX3
ADAT2
MRPL44
MRPS14
ZCCHC4
HUS1
TRIP4
STX16
TGFB1I1
KDM1A
UBE2F
MRFAP1L1
SYT7
HRCT1
NUF2
ATP5MC3
ARHGEF39
EI24
RIN2
GBA
SMARCD2
GTF3C3
ZDHHC24
ACTN3
DYM
SH2B1
RBBP5
ATAD2
MRPL21
IGHMBP2
RNF24
TPM2
ENGASE
UNC93B1
LTO1
XKR8
ZBTB45
TENT2
SOGA1
TMEM242
ZSCAN9
ZMAT2
SPHK2
RPL18
COMMD6
UCHL3
FKBPL
DNAJC19
ADPRHL1
ADNP
VPS13B
FANCG
MTIF2
STX18
FBXW5
C8G
MCC
INTS2
TOR1A
TACO1
RGP1
GBA2
TJP3
RNF114
DPY19L4
ATR
GOLM2
VMAC
NDUFA11
PPIP5K2
PRKAB2
CHD1L
HLA-E
DRG2
UTP25
POLR1H
C19orf25
LSM14B
ZNHIT6
IFTAP
EPS15
ZBTB3
UBE4A
RPP25L
RPS7
AARS2
STAT3
CDC25B
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
RNF216
COPS7A
RFX1
PLEKHM3
PIH1D1
ALDH16A1
SRXN1
EFR3A
PDE4DIP
SPAG4
ZDHHC12
PRMT1
SLC35E2B
TMEM18
RBL1
NDUFS7
LARP1
SYNGR2
GPCPD1
SMG8
PDSS2
GORASP2
ZNF408
ARHGAP1
NR6A1
TIMM9
KIAA0586
KDM3A
NUP85
TOMM7
IL11RA
CGGBP1
C3orf38
AARSD1
RBM28
KDM3B
PPP6C
MTF2
LMO7
RAC1
COPS4
MTOR
KIF3B
PPP1R13L
HINT2
SLC25A25
NAIF1
SLC38A10
SIRT6
CSNK1G3
ANKRD24
DDX1
RPS20
HIF1AN
EPRS1
AKIRIN2
BCAS3
PREB
BANP
UBOX5
FASTKD5
SF3A3
RBM45
MRPL39
ERCC6L2
ZDHHC5
ZMPSTE24
ZNF165
SNAP47
JMJD4
HPS1
OSCAR
NDUFA3
ISOC2
MRPL12
MAIP1
PDLIM7
ZFAT
TTC21B
WWP1
FXN
HIBCH
PKD2L2
CDK8
SSBP1
ICMT
TIMM10
GABPB2
IPO4
SCAMP4
ADAT3
WDR59
FAM135A
WDR70
NCBP3
TCF3
DPY19L1
ARHGAP24
DNM2
ITGB3BP
EFCAB7
NME1
COQ3
PIH1D2
NKAPD1
TSEN54
CASKIN2
EFHD1
TATDN3
NSL1
MEX3C
ETFDH
C4orf46
UBB
TBC1D19
TDP2
ACOT13
SSBP2
ZSCAN30
INTS12
GSTCD
DCTN3
AP1G1
FKTN
PRCD
DSTYK
SLC9A1
TBPL1
CABLES2
ZNF572
GRSF1
MRPS15
C17orf64
TCERG1
SUGCT
MPLKIP
GAA
NUDCD3
CALM2
SIRT5
GTF2H2C_2
GTF2H2C
SMU1
MRPS33
RPS15A
H4C3
RWDD1
SNRPD3
GUCD1
MATR3
PPP5D1
CALM3
NCOA5
MRPL16
TUBGCP3
SRRD
HPS4
PSMD4
RAB11B
DENR
GTF3C5
TRMT2A
RANBP1
VPS25
MRPL38
PSMF1
RRP15
PSMD3
TARS2
NOP16
HIGD2A
SEC13
AP2S1
MRPL58
FUT10
CCDC88A
SLC30A6
TAF1C
BRIX1
MDC1
ZCCHC14
CDK5RAP1
NOTCH2
GTF2H5
EIF5A
EIF5A2
SMIM8
TERF2
SEMA4B
EIF1B
CLPP
RFX7
SERPINB6
UNC13B
RGPD2
RGPD1
ATG16L1
ZNF131
SNU13
ALG10B
MTR
E2F6
PPP4R3B
PGM1
PTEN
KLLN
DHX15
ELP3
CCDC71
MRPL3
CIPC
CCNI
CTNNBL1
CLUAP1
RPL37
CCZ1B
METTL18
C1orf112
IFNAR1
SPATA2
ALKBH3
SEPTIN7
LRP6
DAGLB
SLC35A4
APBB3
NDUFAB1
MELTF
AAR2
CNOT11
ANGEL1
PHKB
ITFG1
OSBP
ZNF391
UBE3B
KCTD10
APPBP2
TFB1M
RPS6
DMAP1
SLC31A1
FKBP15
RECK
EIF3C
EIF3CL
MAPK14
DDX18
INO80C
ZSWIM3
ACOT8
TNPO3
PLS1
ZC3H15
VTA1
NMBR
CARD14
PGBD2
FUCA2
PLEKHG2
NDUFB3
FAM126B
TTC26
ZNF577
TMEM209
ADRM1
POLG
SUPT7L
SLC4A1AP
MTFR1
PDE4A
DPH5
METTL14
COX7A2
SEC62
ZDHHC6
VTI1A
CEP164
THEM4
ZNF184
MTMR14
EIF1AD
BANF1
DTD1
FRA10AC1
WBP2
MLLT1
PRELID2
GALT
NUDT15
B4GAT1
TRAF6
RAG1
SLC35A3
ZNF35
PITPNA
REXO4
PRDX1
CERCAM
MOB4
PTK6
RPS14
MRI1
PRUNE1
MINDY1
AMZ2
MRPL48
NBN
TEX2
SMARCE1
COASY
SMCO4
NEMF
NKIRAS2
DNAJC7
WDPCP
MDH1
PDE7A
NECTIN2
MED13
RNF220
OSGIN1
OPA1
KCNIP3
RPS11
RNF38
PDCL
ZNF551
ZNF555
NEDD1
SMARCC2
EIF2D
SIGMAR1
CFAP298-TCP10L
CFAP298
TMEM222
SLC29A3
C8orf37
IDH1
MDFIC
CCNT1
RNF187
ZNF713
PAFAH2
GTF2H2
COPB2
MBTPS2
RNF7
NELFCD
TCTN3
AURKAIP1
ASB6
AGBL3
PCCB
SARS2
MRPS12
NDUFS5
DCP1A
WDR7
RIN1
C6orf89
C11orf49
PTK2B
DMAC2
DEF8
ELOVL6
TRIM41
SLC18B1
VIRMA
SS18L2
SEC22C
PANK3
DRAM2
CEPT1
RBM25
COMMD2
SH3GLB2
ARHGEF16
METTL25
CCDC59
SCAND1
ZNF76
SNRPB2
TP53I11
KXD1
MEGF8
LMTK3
FAM133B
POLR3B
YIPF3
POLR1C
PSMB3
EVI5L
ZCCHC3
WDR31
TMTC3
CEP290
COA1
SLC25A39
CDKN2AIPNL
KIF16B
ZNF606
STXBP3
DST
BEND6
DHX8
ATG4C
RBM4B
NFE2L2
NSUN4
NECAP2
COA6
TSKU
ZNF638
GON4L
PTPN1
SYT11
ARL14EP
BNIP1
RPAP1
TOMM22
RAB5B
LRRC59
SOCS3
SLC44A1
HMGN4
ARAP1
SREK1IP1
CWC27
TCIRG1
COX16
UPP1
RPN1
MRPL30
MITD1
SPAG16
CSTF2T
WASF1
CDC40
SAR1B
KLF5
ANKRD13C
SNRPB
OMA1
DAB1
FAM214B
BTBD10
MYORG
DDX59
AJUBA
PFDN4
MARCHF7
TSSC4
RNF149
EED
UTP3
EIF3F
NPAS1
ISY1-RAB43
ISY1
COA3
CNTD1
HMGCR
GDAP1
FOXK2
LEO1
TRIB1
CEP120
DCAF10
ZFAND1
SLC27A4
ASXL1
VARS1
SBDS
RPL26
PEMT
RGS9
NOL8
CENPP
KHDRBS3
C1S
TIA1
CWF19L2
PCBD2
PTPN4
C20orf27
PRKCA
SIRT4
SCFD1
RARS1
ABT1
MAFB
KDM5A
CCDC77
MCOLN1
PRMT3
LARS2
ADAM19
RCC1
LRRC37A3
CEP78
LSG1
PNKD
NDUFS3
KBTBD4
SRP68
AGK
BBS1
TIGD1
EIF4E2
C1QBP
FAM200B
CREBL2
USP35
KCTD21
CRLS1
ZZEF1
CYB5D2
STARD3NL
RBIS
ZRANB2
ZNF343
KMT2A
SGSM1
CHST12
RIF1
PPP6R1
RNFT1
NR1H3
ACP2
C12orf73
CCDC71L
SLC35B1
ILF2
GABARAPL1
EIF4A2
MRPS10
RTTN
HDAC5
CZIB
TRIM27
CSF2
TEP1
MTHFD2L
SRPK1
KTN1
GK5
RNF207
VAT1
GUSB
DTX4
ZNF501
RAB5IF
TVP23B
RPL6
GSTA4
SEC14L1
AMOTL1
NIPA1
DNAJC25-GNG10
DNAJC25
DUS1L
NHP2
ACYP2
QKI
HASPIN
ARID1A
ACVR2A
SCML1
DSN1
RPL24
SAAL1
PSMB7
MRPL1
CUL9
ZNF250
TBC1D14
PPM1L
VPS37C
TRIM32
ASTN2
POLI
TTC32
SCNN1A
CLN5
ARNT
KDM4B
POU2F2
ANKRD46
PLEKHG4
ATF2
MAP10
IMPA1
CARMIL1
NICN1
MAD2L1BP
ARHGEF11
GTPBP2
ROBO3
SUCLG1
PRDM8
COL21A1
NVL
CHKA
GGCX
TSGA10
MAN2C1
BAG2
SLC25A16
TADA1
POLR3E
NLRP1
SSR3
DENND3
RPS3A
TMEM8B
RALB
PKIA
MTF1
HOXD8
FAM221B
TRMT1
SHFL
LAPTM5
NIPA2
COQ8B
TAS1R1
NOL9
TUBE1
FAM229B
USP15
IREB2
COG2
MRPL35
TSC1
GFI1B
RPL38
CBX4
NOL11
TPRKB
ZC3H6
ZSCAN26
TEPSIN
NDUFAF8
USP32
TOE1
MUTYH
HIPK1
CORO1C
SMG7
SRSF7
DCAF8
REX1BD
ZNF629
MRPS31
CDC37L1
TTLL7
SHLD2
KPNA2
GLUD1
PDCL3
TIMM23
CTPS1
SNX19
C16orf95
SPNS1
PPM1A
PTGS2
NOP14
GRK4
SPOCD1
H4C4
PPP2R5B
RIOK1
CAGE1
ERGIC2
DYNC2I1
SYMPK
FOXA3
KDSR
SNRPC
OPA3
ADAR
RIPOR3
MDM4
VPS16
PCED1A
PARP2
PDE2A
CFAP20
H4C14
ZNF674
UMAD1
MYH7B
MNAT1
H4C15
GSS
ZNF77
RIOX1
ZNF843
MIF4GD
WDR41
TMEM164
SEMA3D
CCDC38
AMDHD1
RNF213
CASC3
PIKFYVE
YARS2
ZMYM1
SAA1
NARF
NAPRT
KPNA5
EIF6
MEGF9
RGL2
BEGAIN
TOM1L2
DRC3
ARL4A
TIPIN
SRP9
TUBG1
RETREG3
SLC35B4
RLF
ATP8B2
PSMD9
HPD
CTDSP1
ZKSCAN2
SELENOH
FAM83D
PALLD
MRPL15
THEM6
LRCH4
FBXO24
TRIM26
TIPARP
FLCN
SMN2
SMN1
PRRG2
NOSIP
CYP51A1
PHACTR4
LLGL2
YJU2
MTRF1L
EDC4
ADGRL1
MRPL55
FAM219A
LGR6
MANBAL
RPL10A
EHD2
PPP6R3
ZSCAN22
SCYL3
NPEPL1
SHPRH
CCNL1
VPS28
TMEM255B
TAF7
SUGT1
PCYT1A
RAB2A
MAD1L1
PMM1
RCAN1
RPN2
CLCF1
MROH8
SNX3
CHCHD2
NIP7
COG8
GAR1
ZNF2
WASF2
POLR2J
GEMIN7
EPHB3
USP2
TUT1
SCLT1
CDC7
CCNB1
C4orf33
BRF2
AP3B1
TMEM214
WDR36
SH2D5
ST6GALNAC4
ZNF256
PRR7
ELP5
CTDNEP1
NMNAT1
LZIC
TOP3B
CLIP2
APOM
GPT2
DHRS3
DNAH7
MRPL40
HIRA
RAB29
NCAM1
MRPL42
FAM43A
ETS1
DDX41
BAG6
AP2A2
RAB5C
FAAP20
DIS3
RBM43
PYROXD1
PUF60
TPR
ODR4
PURB
WTAP
SOD2
RRP8
ILK
ABCD4
EEF1AKMT1
USP42
ABCB8
RPS24
TBL1X
COL18A1
TSPAN10
NPLOC4
INTS8
PNPO
MYCBP2
NDUFS4
PSMD11