ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741422 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX16386912: 293

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX15039987: MDA-MB-231

◢ SRX15039988: MDA-MB-231

◢ SRX15039990: MDA-MB-231

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◣ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX15039983: T-47D

◢ SRX15039985: T-47D

◢ SRX15039986: T-47D

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

WDR74
MTRNR2L2
SPAG8
CDK12
STOML2
PIGO
MTRNR2L8
CCDC107
TBC1D4
MED23
UBE2F
PSMB6
PEX3
ADAT2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PTPRF
VPS37D
ARHGEF1
ZBTB40
CLTA
RPS7
RGPD2
RGPD1
RNF216
HRCT1
TRIP4
INTS12
GSTCD
ATP5MC3
UTP25
RPL27
TESK1
DMAP1
COMMD2
H4C3
KDM1A
MRFAP1L1
AKIRIN2
AURKAIP1
POLR1H
ZDHHC5
GTF3C3
TOMM7
UBE2L3
RMND1
ARMT1
RUSC2
AHCY
NFE2L2
TLN1
CREB3
LRRC37A3
AP2A2
SIRT5
ARL14EP
NLRX1
SSBP1
TOP3B
CLPB
ZCCHC4
DNAJC19
GNE
PDCL
PHKB
ITFG1
MRPL45
PSMF1
TSSC4
GTF2H4
CYRIB
DNAJC25-GNG10
DNAJC25
OSGIN1
RPP25L
ZFAND1
ARHGEF39
IL11RA
TRAPPC9
SNRPB2
OSCAR
NDUFA3
COX7A2
CCDC200
RBM39
RBBP5
ATR
ZSCAN9
ZNF335
MRFAP1
EIF3E
MRPS14
EPRS1
KIF3B
UBFD1
EARS2
NR6A1
RNF24
ELP3
TBC1D19
WDR43
CABLES2
DYM
FAF1
NCOA5
C9orf131
GBA
NDUFS7
SMG5
GTF2H2
NPR2
ERCC6L2
UBE2V2
TENT2
ENGASE
PPP5D1
CALM3
DPY19L4
SLC35B1
CTNNBL1
RGP1
GBA2
MTERF1
SPHK2
RPL18
TACO1
PANK3
PRDX1
MAD1L1
SLC9A1
DSTYK
PRMT1
STX16
FANCG
AARS2
RPS14
REXO4
MRPL58
FBXW5
C8G
HIBCH
PLEKHM3
INKA2
DDX20
ZMAT2
VCP
SF3A3
AMZ2
EIF1AD
BANF1
EIF4A2
CASC3
CRLS1
GPCPD1
MELK
DPH5
AP1G1
ZER1
PRPSAP1
FAM8A1
NFX1
LOC730098
TMEM242
UNC13B
PAXBP1
DRG2
RPL38
RAC1
TPM2
MTF2
RIN2
DDX18
COMMD6
HINT2
ZMPSTE24
SNAP47
JMJD4
RAD52
ADNP
CCNC
FBXW2
MRPL35
CDK5RAP1
RRP15
TFB1M
MRPL39
DNM2
EIF3F
NDUFC2-KCTD14
NDUFC2
RECK
EDC4
AP4E1
NOTCH2
EI24
CDC25B
PDE4DIP
ZNF638
NDUFAF4
KLHL32
UIMC1
MVB12A
EIF3D
ZKSCAN2
MRPL12
MRPL30
MITD1
ASXL1
POLG2
YTHDF2
ZNF165
TMEM222
SMARCD2
SMU1
ZBTB3
MRPL38
EED
STAT3
MRPL44
RPL37
ZSCAN16
PLEKHG2
HIF1AN
NOL11
MRPL3
ATF2
CCDC88A
PIH1D1
FKTN
ZDHHC24
ACTN3
SP2
FOXK2
PDCL3
ATP5PD
PAFAH2
WDR31
ZNHIT6
GORASP2
WDR70
PDCD6
ALG10B
PCCA
ZNF8
FXN
UBE4A
NUTM1
NOP10
RNFT1
NUDT9
CIC
POLR2M
P3H4
FKBP10
SH2B1
SNRPE
DOT1L
UCHL3
SMCO4
LUC7L2
PRELID2
MDM4
TANK
TXNDC11
ZNF461
MSL2
ACBD4
C8orf37
LMAN2
CARD14
COPS7A
DCP1A
FAM133B
RPL10A
LRRC59
FAM227B
DTWD1
SNX16
KXD1
ZDHHC12
RFX1
MTRNR2L9
NUCKS1
ALDH16A1
SGSM1
CACTIN
SOGA1
ATG16L1
COASY
MLLT1
SLC29A3
TOR1A
SPATA2
TRMT1
METTL14
C19orf25
SORBS1
EIF3C
ADRM1
TKT
GOLM2
EIF3CL
TERF2
HLA-E
SETD1A
PSMD9
HPD
SRRD
HPS4
GADD45B
ZFP36L1
CEP164
ARNT
ZCCHC14
KIF16B
SRXN1
SWSAP1
PAK4
LTO1
UBOX5
FASTKD5
EPS15
TJP3
SLC30A6
PDLIM7
SLC25A16
PIGBOS1
PIGB
AP3B1
BRAP
ACAD10
CLK3
SLC39A10
UEVLD
HPS1
CPPED1
CHST12
TIPARP
ISOC2
CCNT1
SPAG4
MEGF8
TAF1C
ZNF77
ZNF131
SYNJ2
SMG8
HPS6
DDX17
GLIS2
CCDC22
GTF2H5
HNRNPA2B1
F2
PPP6R1
PDE4A
TIA1
RIOX1
USP35
KCTD21
SRPK1
CBX3
RABGGTA
SRCIN1
SPATC1L
MKNK2
ILF2
SIRT4
SLC25A20
RAB2A
NEURL4
TCTN3
RPL6
NAE1
KIF2C
KDSR
MEGF9
EFR3A
UBXN4
COPS4
TCIRG1
LDLRAP1
FBXL19
FKBPL
TRIM26
NPAS4
CLPP
ADGRL1
RBM4B
DYNC2I1
UNC93B1
GPR160
ATP5MC1
RAB5C
FMC1-LUC7L2
LSM14B
ARPC3
PPP1R13L
PITPNA
ZNF184
GSTA4
CLUAP1
LGR6
SCAMP4
ADAT3
PSMD4
DAGLB
SLC25A25
NAIF1
SNU13
GADD45GIP1
PTPRA
LARP1
KANSL3
ATG4C
ICMT
STX6
TDRD7
RPS6
ENSA
SCML1
ATP6V0E2
GPR137
MRPL54
APBA3
NUP85
RPS29
DLAT
NELFCD
TIMM9
KIAA0586
TFAM
CHMP6
PREB
WASF2
UBE2Q1
ZNF555
CTR9
TP53RK
EMC4
SLC38A10
SLC27A4
RPS12
ZNF234
NACC1
ZNF687
TP53I11
MATR3
SLC35A4
CYLD
APBB3
GON4L
GALNT10
RABGEF1
GPSM2
POFUT1
PLAGL2
TCF3
RAB14
GSN
TK1
AFMID
NCOA6
GRPEL2
RNF114
KANK2
HOOK1
KTN1
SEMA4B
KDM3B
BCL9L
BAD
AARSD1
SYMPK
FOXA3
TTC38
ZFAND4
MFSD4B
TUFM
MEX3C
AKT2
DTD1
GRSF1
ALDH18A1
PRRT3
ATF6
RAB11B
EIF5A
WDR59
MDGA1
VPS37C
SYT7
PDLIM1
GEMIN6
MTMR14
DHX16
TMEM214
KIFC3
TSACC
CCT3
XKR8
RPL36
MTHFSD
ABRAXAS2
NEDD1
MCC
GK5
NUF2
PCCB
H6PD
TMEM161A
MANBAL
ST6GALNAC6
PPP2R2A
NEMF
RGL2
NCAM2
PDSS2
DEF8
CYB5B
GNG7
PTK2B
NICN1
TSC1
GFI1B
ZNF551
RIF1
ZSCAN25
ICAM1
GCDH
HMGN4
HM13
SHFL
SPOCD1
RPL37A
MAPK14
COX5A
SARS2
MRPS12
ZNF609
TBX6
PTPN1
RAB4B
EEF1AKMT1
SNRPC
RNF187
DPP3
TMEM41A
PSMB3
GRK6
ZNF606
RNF213
KIAA0895
ACOT9
YEATS2
VKORC1
HAX1
PARP2
PNN
KLHDC9
DPP9
HEXB
DMAC2
GABARAP
ZNF713
CORO1C
RASA4
USP45
ADAM19
TIGD1
EIF4E2
ACTL6A
PPP6C
CNOT11
TTYH3
TPK1
SLC25A44
SYT11
RTKN
HUS1
INO80C
NUDT3
LZTS3
ZZEF1
CYB5D2
CBX1
RCC1
UROS
BCCIP
PPP1R9B
ANLN
ABCB8
SUOX
MOSPD3
TADA1
PPEF1
ZBTB43
SEPTIN7
VCL
STRBP
ECSIT
RAB8A
RBM12B
MARS1
TARS2
LOXL4
E2F6
MELTF
USP42
LMTK3
ADPRHL1
FAM161B
COQ6
SPC24
ATP6V0E1
PGPEP1
COX16
CAMK1
WIPI2
PPIL3
NIF3L1
MAD2L1BP
HOMEZ
CDT1
NEK6
FUT10
DHX15
FAIM
CBX4
GABARAPL1
EPC2
MTRNR2L10
ZNF764
SH3GLB2
PPP1R9A
PKD2L2
SMN2
SMN1
RCN1
CERCAM
MAST3
FBXL18
SLC12A4
HIBADH
DSN1
MRPS17
UTP3
STARD3NL
RAB5B
GAMT
TOP1
ZNF443
POLDIP3
PHLDA2
ADAMTSL5
VARS1
SRC
GGCX
BCAS1
GLIPR1L2
SDAD1
TRIM32
ASTN2
VAT1
EAPP
NOL10
ARHGAP9
PCBD2
TIMM10
EXD1
CHP1
TIMM17A
ARHGEF11
OPA3
CLTB
TTI2
SLC44A1
RASA4B
TBRG4
CDK8
TMC6
CWF19L2
FLOT1
DCUN1D2
POLG
NDUFAB1
FAM168B
DOLPP1
S1PR4
CTDSP1
EIF2D
SCFD1
MCM7
AP4M1
TPP2
SNX15
TM9SF4
DCTN1
NOM1
MTBP
MRPL13
INTS5
DGAT2
B4GAT1
RBM25
SLC31A1
PSMD3
FKBP15
SNUPN
CCDC42
NIPA1
MRPS23
LIMS1
MBD4
IFT122
CTC1
SLX4IP
NSMCE1
AMOTL1
ZFAT
EHBP1L1
ASF1B
ZNF799
SEC13
NIPA2
MEMO1
PPP6R3
NCOA7
OGFOD1
NUDT8
STK4
FAM193B
TCP11L1
RPL35A
IQCG
POLR3E
ABHD16A
PNPLA6
MYNN
RIN3
TADA3
ARPC4-TTLL3
ARPC4
TEAD1
CIZ1
ZNF572
MTOR
RNF207
FEM1A
PRUNE1
MINDY1
SLC66A3
MOK
IL1RAP
METTL3
ATE1
FABP1
EFNA4
VPS13B
LAPTM5
KATNIP
GTF3C1
BANP
ITGB3BP
EFCAB7
ABHD3
STXBP3
GABPB2
ERCC1
PKN3
PMM1
RAPGEF1
PRMT5
TSPAN10
NPLOC4
CYP2R1
USP36
SLC29A2
MNT
ZNF582
DCT
SYNGR2
TRIM59
COQ7
SAMD8
C16orf95
UQCC1
RPN2
REXO5
ERI2
ILDR1
TMEM259
SLC35E2B
ZNF579
TBPL1
NDUFB4
ASGR1
TMEM19
TMEM184A
MRI1
ARAF
RPS10-NUDT3
RPS10
CEP78
DDHD2
UBE2I
FLCN
SEC14L4
H4C8
PGC
WWOX
SMARCC2
MED18
RABL3
GTF2E1
PHF12
ARFGEF2
ZNF3
ARHGEF3
INTS10
RIPOR3
ANKRD13C
TCEA2
TGFB1I1
POLR2J3
AP2S1
ALOXE3
ZYX
GRK1
ZNF343
STRN3
METTL22
APOH
AP4S1
CIAO3
METTL25
GHITM
CCDC59
MAP11
UPP1
HEATR1
ZNF843
SDR39U1
PFDN4
NME1
LMO7
TRIB3
DCAF11
RRBP1
H2AC12
TBL3
CDA
HSPA6
CDK9
ZC3H15
QRICH1
LSG1
TRPM6
C8orf76
USP48
ZNF24
TFPT
PRPF31
CLCF1
SEC62
NDUFS5
LTA4H
LPP
CCDC130
ATP5IF1
USP8
SBDS
RHOF
INTS4
PWP2
MROH8
LOC102724159
DNAAF3
TIMM22
UQCR11
TATDN1
NDUFB9
SEC14L1
EIF5A2
SLC35E2A
NCBP3
ATG4D
MAP3K10
SRPK2
NUMA1
LRTOMT
ELK3
RPS19
MPV17L2
RBM12
NKD1
CPNE1
BCAR3
JAGN1
ID1
ZNF408
ARHGAP1
C1QTNF6
LNPEP
CDC5L
C12orf57
SSBP2
CDK11B
CDK11A
ASB6
WDR36
INAFM2
PGK1
DPY19L1
TSEN54
MRPS15
DPF2
CASKIN2
MOB3A
IZUMO4
CELSR3
AJUBA
TIMM23B
PARG
SCN8A
SCCPDH
SNX3
FDPS
DYNLRB1
LPAR2
VTA1
NMBR
FRMD8
ARHGEF16
RFX7
PRRC2B
PRRG2
NOSIP
PYDC5
IFI16
PCK1
EPOP
STX18
POLR3H
FBXO31
MYO1C
ZBTB38
POC5
TCERG1
CDAN1
CDIPT
RPL22
PDK2
DAZAP1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SH2D5
NLRP1
MTIF2
LSM12
EMC8
COX4I1
ZBTB45
DECR1
ZNF256
EVA1B
NES
CRTC1
RBIS
ALKBH3
ROBO3
ANXA2
PRXL2C
TRIM28
FAM220A
CDK20
BRWD3
CBY3
RARS1
DNAH2
ABCC3
MIGA2
CD2BP2
HNRNPLL
HMGB1
EHD2
CAPG
KPNB1
HEXIM1
ATF7IP
ZSWIM4
PPP1R15A
MRAS