ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741420 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX16386912: 293

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX15039987: MDA-MB-231

◢ SRX15039988: MDA-MB-231

◢ SRX15039990: MDA-MB-231

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◣ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX15039983: T-47D

◢ SRX15039985: T-47D

◢ SRX15039986: T-47D

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

WDR74
MTRNR2L8
GTF2H4
PTPRF
CCDC107
PSMB6
MRPL45
VPS37D
MTRNR2L2
ZNF335
PIH1D1
ALDH16A1
TOMM7
RGPD2
RGPD1
NUDT9
TBC1D4
RNF24
SMU1
ZMAT2
UBE2V2
MRFAP1L1
CYRIB
HLA-E
NLRX1
UBE2L3
CDK12
ADRM1
CTNNBL1
TESK1
AHCY
RNF216
MELK
UBFD1
EARS2
XKR8
NR6A1
TOR1A
OSCAR
NDUFA3
CLTA
WDR43
KXD1
MED23
NEURL4
C19orf25
PHKB
ITFG1
NCOA5
PIGO
UBOX5
FASTKD5
MRFAP1
ZDHHC24
ACTN3
RIN2
ZDHHC12
SPAG8
DLAT
MCC
DPH5
RPL6
PREB
EPRS1
CFDP1
STOML2
HAX1
DAGLB
ZNHIT6
CWF19L2
SOGA1
OSGIN1
TERF2
ARNT
RAC1
PRMT1
ARHGEF1
GTF2H5
ENGASE
FOXK2
HRCT1
CRLS1
AP2A2
TIA1
PAXBP1
ZCCHC4
SMARCD2
RUSC2
ARHGEF39
EIF3C
EIF3CL
UTP25
MLLT1
AARS2
FKTN
FXN
KDM3B
TKT
EPS15
VCP
ZNF131
GPCPD1
ICMT
CLK3
CDC25B
LSM14B
GRSF1
LDLRAP1
SCML1
KTN1
SLC29A3
PAK4
CCNC
ZNF184
MAPK14
MVB12A
UNC93B1
TLN1
CREB3
AKIRIN2
LAPTM5
DRG2
TRMT1
ATG4C
TIMM23
LPAR2
ZNF638
LEO1
MATR3
CNOT11
DMAP1
LARP1
EED
EIF3D
SPHK2
RPL18
TAF1C
SLC35A4
APBB3
PDSS2
DYM
MRPL54
APBA3
DNAJC19
RPS14
FAM8A1
SRXN1
FBXW5
C8G
LUC7L2
SP2
FMC1-LUC7L2
LOC730098
GABARAPL1
HPS6
SMCO4
CLPB
FKBPL
TGDS
CDK8
POLG2
EI24
PDCL
PPP1R13L
STX16
NACC1
RPL37
MRPL58
PDCL3
GON4L
SYT11
TIMM23B
PARG
SPOCD1
NDUFS7
RBM4B
NUP85
H4C6
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NUF2
FANCG
STXBP4
COX11
GADD45GIP1
SMARCC2
SH2B1
PDE4A
TUFM
C16orf70
CCDC200
SCAMP4
ADAT3
TPM2
SLC44A1
RPL36
ADPRHL1
SLC38A10
GRPEL2
C17orf64
ZNF551
RPP25L
SLC25A20
SLC25A25
NAIF1
ZZEF1
CYB5D2
HIPK3
CEP164
HEXB
ZBTB43
MEGF8
TRIP4
TPK1
C4orf48
KDSR
TARS2
RPL10A
NMRK1
ADNP
PCCB
PTPN1
TFB1M
TENT2
MRPL35
CBX4
RBM12
CPNE1
KANSL3
HMGN4
PANK3
SBDS
RAB2A
INTS5
ATR
UIMC1
DENR
KLF5
FPR1
DHX15
ELOVL6
TRAPPC3
SORBS1
IL11RA
SGSM1
PDLIM7
EFR3A
TIMM10
FAAP100
SETD1A
SLC9A1
DHRS3
TJP3
MRPL38
CHST15
RBM39
GHITM
MEX3C
RIOX1
CSRNP1
SRRD
HPS4
ZCCHC14
MTMR14
PTK2B
ASXL1
TCF3
PTPN4
SIRT5
DNM2
MRPL44
GLIPR1L2
MEGF9
DDX18
SSBP2
CASP4
HPS1
PKD2L2
DPF2
PSMB3
CAMK2G
SMG8
UROS
BCCIP
MCM7
AP4M1
NUMA1
LRTOMT
LRRC37A3
SNRPC
TDP2
ACOT13
SPAG4
GABPB2
CCNT1
CCDC22
ZC3H15
CIC
MAP2K6
AARSD1
PITPNA
SSBP1
GK5
NFE2L2
RECK
SPATA2
ZNF555
GNE
GFUS
KRBA2
ZFAND1
NELFCD
PRPSAP1
SMG5
BMS1
SNU13
PLEKHG2
RBM12B
ALG10B
DCT
PKD1L2
TMEM242
SARS2
MRPS12
ABCC3
ATP5PD
SDAD1
MARCHF7
GSTA4
NCBP3
FDPS
FLOT1
FAM168B
CIAO3
CARD14
ATG16L1
UBE4A
CCDC117
BIRC3
TM2D1
RABGGTA
ICAM1
EMC8
COX4I1
TAF5
BEGAIN
POLR3E
TRIM59
TOR1B
PSMD5
TMEM68
TGS1
RNF114
YTHDF2
FBXO46
TMEM214
TRIM32
ASTN2
RGP1
GBA2
EVI5L
ELAVL1
PCID2
CUL4A
MGAT1
MRPL39
RAB11B
EIF3E
SEC14L1
KIF16B
HINT2
COASY
ZFAT
MTOR
GSDMD
EMC4
RCAN1
SLC45A4
COMMD2
RIF1
HSD17B11
GGCX
CCDC43
TSEN54
CASKIN2
SCFD1
MRPL12
ANGEL2
TRAM1
ROBO4
CLPP
PEX3
ADAT2
DHX16
LZTS3
TBPL1
SLC27A4
SLC26A11
PSMD9
HPD
VPS13B
TBX6
FAM220A
STRADA
TBX3
RPS12
TLE2
ZNF606
C9orf131
NANP
RBMS3
CIZ1
ATP5MC1
HIBADH
ZNF839
SLC30A6
ESCO1
TMEM267
WDR59
MANBAL
GORASP2
ARSD
MAML3
REXO5
ERI2
LAMTOR5
MAP4K1
EIF3K
HIBCH
MAD2L1BP
SNX16
GBA
RFX1
MTRNR2L9
NUCKS1
CACTIN
METTL14
GOLM2
GADD45B
ZFP36L1
SWSAP1
LTO1
ZBTB3
SLC25A16
PIGBOS1
PIGB
AP3B1
BRAP
ACAD10
SLC39A10
UEVLD
CPPED1
CHST12
TIPARP
ISOC2
ZNF77
SYNJ2
DDX17
CABLES2
GLIS2
HNRNPA2B1
F2
PPP6R1
USP35
KCTD21
SRPK1
CBX3
SRCIN1
SPATC1L
MKNK2
ILF2
SIRT4
SLC35B1
TCTN3
NAE1
KIF2C
UBXN4
COPS4
TCIRG1
FBXL19
TRIM26
NPAS4
ADGRL1
DYNC2I1
GPR160
RAB5C
ARPC3
CLUAP1
LGR6
PSMD4
PTPRA
STX6
TDRD7
RPS6
ENSA
ATP6V0E2
PPP5D1
GPR137
CALM3
RPS29
TIMM9
KIAA0586
TFAM
CHMP6
WASF2
UBE2Q1
CTR9
TP53RK
ZNF234
ZNF687
TP53I11
CYLD
GALNT10
RABGEF1
GPSM2
PRELID2
POFUT1
PLAGL2
RAB14
GSN
TK1
AFMID
NCOA6
KANK2
HOOK1
SEMA4B
BCL9L
BAD
SYMPK
FOXA3
TTC38
ZFAND4
MFSD4B
AKT2
DTD1
ALDH18A1
PRRT3
ATF6
EIF5A
MDGA1
VPS37C
SYT7
PDLIM1
GEMIN6
ZER1
KIFC3
TSACC
CCT3
MTHFSD
ABRAXAS2
NEDD1
H6PD
TMEM161A
ST6GALNAC6
PPP2R2A
NEMF
RGL2
NCAM2
DEF8
CYB5B
GNG7
NICN1
TSC1
GFI1B
ZSCAN25
GCDH
HM13
SHFL
RBBP5
RPL37A
COX5A
ZNF609
CDK5RAP1
RAB4B
EEF1AKMT1
RNF187
DPP3
TMEM41A
GRK6
RNF213
RPL27
KIAA0895
ACOT9
ZBTB40
YEATS2
VKORC1
PARP2
PNN
KLHDC9
DPP9
DMAC2
GABARAP
ZNF713
CORO1C
RASA4
USP45
GTF3C3
ADAM19
TIGD1
EIF4E2
ACTL6A
PPP6C
C8orf37
TTYH3
AURKAIP1
SLC25A44
RTKN
HUS1
INO80C
NUDT3
CBX1
RCC1
PPP1R9B
ANLN
ABCB8
SUOX
MOSPD3
TADA1
PPEF1
SEPTIN7
VCL
STRBP
ECSIT
RAB8A
MARS1
LOXL4
E2F6
MELTF
USP42
STAT3
LMTK3
FAM161B
COQ6
SPC24
ATP6V0E1
AMZ2
PGPEP1
COX16
CAMK1
WIPI2
PPIL3
NIF3L1
HOMEZ
CDT1
NEK6
UBE2F
TACO1
FUT10
FAIM
EPC2
MTRNR2L10
ZNF764
SH3GLB2
PPP1R9A
SMN2
SMN1
RCN1
H4C3
CERCAM
MAST3
FBXL18
SLC12A4
DPY19L4
DSN1
MRPS17
UTP3
STARD3NL
RAB5B
GAMT
TOP1
ZNF443
RPS7
POLDIP3
PHLDA2
ADAMTSL5
VARS1
SRC
BCAS1
VAT1
EAPP
NOL10
ARHGAP9
PCBD2
EXD1
CHP1
TIMM17A
ARHGEF11
OPA3
CLTB
RAD52
TTI2
RASA4B
TBRG4
TMC6
NPR2
DCUN1D2
ATP5MC3
POLG
NDUFAB1
KDM1A
DOLPP1
S1PR4
CTDSP1
EIF2D
TPP2
SNX15
TM9SF4
NUTM1
NOP10
DCTN1
NOM1
MTBP
MRPL13
DGAT2
B4GAT1
RBM25
ELP3
SLC31A1
PSMD3
FKBP15
SNUPN
CCDC42
NIPA1
MRPS23
LIMS1
MBD4
IFT122
CTC1
SLX4IP
NSMCE1
AMOTL1
REXO4
EHBP1L1
ASF1B
ZNF799
SEC13
NIPA2
MEMO1
PPP6R3
NCOA7
OGFOD1
NUDT8
STK4
FAM193B
TCP11L1
RPL35A
IQCG
DSTYK
RMND1
ARMT1
ABHD16A
PNPLA6
MYNN
RIN3
TADA3
ARPC4-TTLL3
ARPC4
TEAD1
ZNF572
RNF207
FEM1A
PRUNE1
MINDY1
SLC66A3
SF3A3
MOK
MTF2
IL1RAP
METTL3
ATE1
RPL38
FABP1
EFNA4
KATNIP
GTF3C1
BANP
ITGB3BP
EFCAB7
ABHD3
STXBP3
ERCC1
PKN3
PMM1
RAPGEF1
PRMT5
TSPAN10
NPLOC4
CYP2R1
USP36
SLC29A2
MNT
ZNF582
TBC1D19
SYNGR2
KIF3B
COQ7
ZKSCAN2
SAMD8
C16orf95
MRPS14
UQCC1
RPN2
ILDR1
TMEM259
SLC35E2B
ZNF579
NDUFB4
ASGR1
TMEM19
TMEM184A
MRI1
ARAF
RPS10-NUDT3
RPS10
CEP78
DDHD2
UBE2I
FLCN
DOT1L
SEC14L4
H4C8
PGC
EIF1AD
BANF1
WWOX
WDR70
MED18
RABL3
GTF2E1
COMMD6
INTS12
GSTCD
PHF12
ARFGEF2
ZNF3
ARHGEF3
INTS10
RIPOR3
ANKRD13C
TCEA2
TGFB1I1
POLR2J3
AP2S1
ALOXE3
ZYX
GRK1
ZNF343
STRN3
METTL22
APOH
AP4S1
METTL25
CCDC59
FAF1
PLEKHM3
MAP11
UPP1
UCHL3
EIF3F
HEATR1
ZNF843
SDR39U1
PFDN4
NME1
LMO7
TRIB3
DCAF11
RRBP1
H2AC12
TBL3
CDA
HSPA6
CDK9
QRICH1
LSG1
TRPM6
MAD1L1
C8orf76
USP48
ZNF24
TFPT
PRPF31
CLCF1
SEC62
NDUFS5
LTA4H
COX7A2
LPP
CCDC130
ATP5IF1
USP8
RHOF
INTS4
PWP2
MROH8
LOC102724159
DNAAF3
TIMM22
ZSCAN9
UQCR11
TATDN1
NDUFB9
EIF5A2
SLC35E2A
GTF2H2
ATG4D
MAP3K10
MDM4
SRPK2
ELK3
RPS19
MPV17L2
PDE4DIP
NKD1
BCAR3
JAGN1
ID1
ZNF408
ARHGAP1
C1QTNF6
LNPEP
ERCC6L2
CDC5L
C12orf57
TANK
POLR1H
CDK11B
CDK11A
ASB6
WDR36
INAFM2
PGK1
DPY19L1
MRPS15
MOB3A
IZUMO4
CELSR3
AJUBA
SCN8A
SCCPDH
SNX3
DYNLRB1
VTA1
NMBR
FRMD8
ARHGEF16
RFX7
PRRC2B
PRRG2
NOSIP
PYDC5
IFI16
PCK1
EPOP
STX18
POLR3H
FBXO31
MYO1C
ZBTB38
POC5
TCERG1
CDAN1
NOL11
CDIPT
RPL22
PDK2
DAZAP1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SH2D5
NLRP1
MTIF2
LSM12
ZBTB45
INKA2
DDX20
DECR1
ZNF256
EVA1B
NES
CRTC1
RBIS
ALKBH3
ROBO3
ANXA2
PRXL2C
PAFAH2
TRIM28
CDK20
BRWD3
ZDHHC5
CBY3
RARS1