ChIP-Atlas: Target genes

Potential target genes for SPDEF

Query protein: SPDEF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX323402 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SPDEF's Target genes

◢ SPDEF: Average

◢ SRX2164790: A549

◢ SRX2164792: A549

◢ SRX10475380: MCF-7

◢ SRX10475381: MCF-7

◢ SRX323401: MCF-7

◣ SRX323402: MCF-7

◢ SRX323403: MCF-7

◢ SPDEF: STRING

LRATD2
SMARCD2
ADNP
SLC2A10
DUX4
BCL3
TRIM3
TIMM10B
MTRNR2L2
MSH3
DHFR
STARD10
PLCB4
RTBDN
MAST1
POLR3B
MTRNR2L8
ARL14EP
MYADM
BMP7
SLC23A1
PROB1
MZB1
METTL25
CCDC59
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MRPL44
C9orf152
FLYWCH2
PCCA
REXO4
ADAMTS13
ARHGAP40
TET3
ERGIC1
EXOC2
PSMD6
S100A16
S100A14
MOB4
TMEM87B
AFF4
KRT8
KRT18
KIF5C
WDR74
STX5
COL23A1
CUEDC1
GNPNAT1
STX16
TACO1
PSRC1
SPRYD3
NOL11
ZNF500
EAPP
PMF1-BGLAP
PMF1
PTPRN2
UCHL5
RO60
TARS2
ZNF609
MUC5B
ANKRD60
ART1
FLYWCH1
BAZ2A
TTC39A
NOTCH2
PMEPA1
SMG8
LMNB2
MAMDC2
IQANK1
FAM83H
MUC3A
PAQR4
KREMEN2
ARHGAP39
KMT2C
N4BP3
ZFP36
PLEKHG2
TOP3A
SMCR8
TNFRSF1A
FAM221A
SCAMP1
FASN
FRG2C
ZNF217
SKA2
PRR11
CYRIB
FAM20B
USPL1
HMGB1
SNAP29
PI4KA
INKA2
DDX20
MADD
REPS1
ALG8
DNAJC10
GNAQ
DYNC1LI1
REXO5
ERI2
EMB
DSTYK
IPPK
EIF1AD
CST6
BANF1
LDAH
GGPS1
ARID4B
MTRNR2L1
MED23
GRK6
EED
SCARB2
FAM47E
SEC16A
C9orf163
FOXA1
CEP63
ANAPC13
ZNF860
OSBPL10
MARCHF7
ZNF408
ARHGAP1
DPY19L4
TPD52
BCAS2
DUSP6
EDN1
FAM240C
HIPK1
VPS13B
ZG16B
LEMD2
SNRPB2
FAM207A
TRIM48
SNAPC1
SPOP
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
TRIM37
CPNE8
RPS7
ZNF518A
NDUFS3
KBTBD4
FAM180B
SMIM14
FLNA
EMD
RUSC1
RBBP5
PHRF1
ZC3HC1
WDR24
STUB1
JMJD8
USP32
PSMB7
LSG1
IER3
FLOT1
TBC1D30
INTS12
GSTCD
ECT2
ZMYND8
DCAF10
TMEM199
SEBOX
POLDIP2
BCAS4
FAM227B
DTWD1
SLC25A36
VPS37B
TOB2
TOR1AIP2
TOR1AIP1
NEK5
CNOT3
GSE1
NQO1
USP38
MLPH
ID1
WDR11
NECTIN1
ATP5MC2
CNBP
BLOC1S5
CARMIL1
AP1M1
PPM1H
PPM1J
TAFA3
PMPCB
PGK1
APPBP2
AP3B1
MAPK9
SCYL3
TFF3
RTEL1
STMN3
WDR97
MAF1
CYC1
CA4
RBSN
MEF2A
CXXC5
SP1
TMEM210
LRRC26
TEX14
RAD51C
SPHK2
RPL18
FAM83E
NOXA1
IFRD1
DEDD
CHD8
COMMD2
TMEM262
KANSL3
FER1L5
TRIM33
GABPB1
DNAJC25-GNG10
DNAJC25
GSPT1
PRMT6
SWSAP1
EPOR
FFAR2
CPOX
UNK
H3-3B
MICA
ARL8B
SLC39A6
ELP2
CCDC200
MUC2
CYREN
PHF14
PCYT1A
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
SLC34A3
RNF224
RNF208
CYSRT1
ADPRHL1
PLXNB2
UST
ESRP2
PLA2G15
SH3YL1
ACP1
MRPL1
TFF1
SULF2
KRR1
RASEF
KMT2A
MDM4
SYNGR2
MRPS33
ZBED8
DGKA
PDE8A
TTC6
OTUD7B
PPIP5K1
CKMT1B
H2BC21
H2AC21
H2AC20
DEXI
CLEC16A
TLNRD1
NRAS
TSPAN13
TMEM183A
SLC33A1
LNPEP
TCAF1
TOP3B
USP9X
LUC7L2
UTP25
ALG10
SETD9
ZNF446
ZNF324
ATAD2
GOLM1
PPM1D
ZFP62
PMVK
EEF2K
TMEM251
MOAP1
EPHB3
SNRPB
PSMA5
NBEAL2
CCDC12
CLTC
VMP1
PTRH2
KAZALD1
LPCAT1
LRP6
ARHGAP8
TSEN54
LLGL2
CASKIN2
ALG10B
DDX59
IL2RA
BRIP1
PPP2R5E
INTS2
ZNF410
ERBB3
BRINP3
EGR1
CIAO3
PPIP5K2
TBPL1
RPL37
CARD6
PPP3R1
RPS29
ZNF197
MMADHC
GSK3B
BCAS3
TRIP4
PCLAF
RHEBL1
KMT2D
FMO5
PDS5A
FRG2
BZW1
GRIK3
ZBTB7B
LENEP
PLCG1
LINS1
ASB7
KIF26A
HNRNPA2B1
CBX3
NCOA3
ADH5
HEATR6
SYCE1L
MON1B
ATR
SGPP1
LSM5
AVL9
YIF1A
TMEM151A
SLC24A1
PDE4DIP
PSMC5
FTSJ3
B3GAT2
GNPDA2
TSKU
NPM1
TPTE
TPD52L2
ABHD16B
ATXN2
NEDD4
RAB1B
RCAN1
ERCC6L2
TOMM22
CRNKL1
CFAP61
RPL12
LRSAM1
DDX23
KIF22
TANC2
RHOH
MESP2
TBATA
NPAS4
KMT5A
CLDN4
ETFA
ARL4D
RABGEF1
SLC35F6
FAM110C
SIRT4
PRODH
LOC102724788
RPS6KB2
PTPRCAP
WDR93
PEX11A
C6orf89
EOLA1
HSFX3
NSUN5
HSFX4
ZNF106
SNAP23
ARG2
CPLX2
CALHM4
HTR5A
BHLHE40
MTFR1L
CAV3
TRIB3
BCAS1
ERN2
LOC102724770
DGCR6
IQSEC3
MFSD4A
NBPF6
SLC45A4
EIF2S1
ATP6V1D
PGLYRP2
RHCG
KRT86
ZDHHC1
MED26
TGFB3
IFT43
RACK1
PYGB
FBXO46
KCNJ18
MKRN1
CCPG1
C15orf65
DGKZ
ADARB1
SULT1A4
SULT1A3
ZC3H10
RPL41
ESYT1
TRMT12
PPP4R3A
TBX2
ECH1
DHTKD1
FAM151B
MXRA8
METTL3
SLC7A8
TECPR1
MTMR12
CAMK2N1
NR1H3
ACP2
RIPOR3
SPO11
ZNF655
FAM200A
HSH2D
SLC22A5
H4C8
SLCO4A1
PARD6B
RPS26
FOSL1
CCDC85B
TXNDC11
SYCP2
FAM217B
MISP3
CAP1
ZSWIM1
HEG1
SYTL1
RPEL1
KLC1
RNF39
PPP1R11
POLR1H
INSM2
DMTF1
CCDC174
SLC25A40
DBF4
SLC35A1
TNS4
REN
SPATA13
SECISBP2
NMNAT1
LZIC
CKS2
RALGDS
UBE3C
SLC39A1
JTB
CRTC2
CREB3L4
SPTBN4
BLVRB
CYP2J2
ARID3B
IDH3A
EHMT1
CST3
ARRDC1
FKBP4
PRLH
PFDN4
IGFBP4
ANKRD35
CRACR2A
RGS19
OPRL1
LKAAEAR1
TEP1
FAM24A
CYP27C1
DEF6
SNRPA
C19orf54
DHX8
PRORP
PPP2R3C
PTPRU
TMEM95
KCTD11
SLC16A5
TRIB1
SLIRP
ANXA6
ALKBH1
LARGE1
DPF1
UBA1
SRMS
PTK6
FNDC11
TXNDC5
NTSR1
RAPGEF6
RMND5B
ARID4A
PLEKHN1
PERM1
ZKSCAN2
TAF12
RRM2
MB
NEMP1
NAB2
UBC
ARPP19
NBPF1
GREB1
TSC2
NTHL1
ZNF681
RPSAP58
BAIAP2
RIPPLY2
NEDD9
CYB5R4
FEM1A
RNF139
MICALL2
CCNL1
NCBP2AS2
NCBP2
LAMTOR1
ANAPC15
BARHL1
ITGB5
RPL32
SPINK4
COMT
VPS26C
SUMO3
MYBPC3
KRT19
RBBP8NL
ESR1
NXNL2
PPL
HDAC11
HCAR3
HCAR1
LRRC31
DHRS3
ANO7
TPK1
UAP1L1
SAPCD2
NKX1-1
HES1
DDX42
CCDC47
AKAP1
PTPN1
MRPS11
MRPL46
DNAAF3
NUCKS1
FAXDC2
ALLC
SMS
LIN54
PNKD
PABPC1L2B
REM2
TPD52L1
ZNF23
ING4
LHPP
CHD4
SLC25A24
PRR7
FAM107B
RPL35A
IQCG
ODC1
CD59
KPNA1
MYO5C
ZNF30
RARA
CST4
UGT2B15
ZNF335
CDC42EP3
ALDH3B2
TDRD10
SHE
FANCF
TMEM30B
PDE4D
ARFGEF2
PEX14
FNBP4
CYP4V2
PLEKHF2
MTOR
RIPK3
RBM19
CELSR2
ADCY4
PIP5KL1
DPM2
HMG20B
E2F2
CST2
ADSS1
PPIH
CAPN8
POLR3F
DZANK1
IL12A
GFPT1
IRF2BP1
CRYM
RCHY1
GORAB
RHOBTB2
TPCN1
STRA6
AHSG
SYT5
EXD2
MYEOV
DIDO1
NARF
CYBC1
WASHC5
PRKAG2
NSMCE2
ISG20
PROSER1
NHLRC3
HLTF
KCNH7
CASZ1
HSF1
BOP1
AMBRA1
TXNRD1
LIMK2
CANT1
TBC1D15
FAM83A
SLC1A5
RAC3
NME1
LRRC45
CENPX
RAB15
CHD2
SPIN1
TAOK3
SUDS3
SFXN2
ARL3
MRPS23
TRAPPC9
SLC9A3R2
FAM228A
USE1
DBNL
ZHX1-C8orf76
ZHX1
TOMM34
STK4
GTF2H2
TUBG1
RETREG3
RGS9
ELL
RASAL1
VPS37C
SLX4IP
MKKS
DCXR
CSTF1
AURKA
GPAA1
EXOSC4
SLC13A1
TUBD1
RPS6KB1
NPDC1
ENTPD2
CNOT11
ZBTB8OS
TUFT1
RBBP4
OSBPL7
LRRC46
TNRC18
CSRP1
PDE11A
GOLGA1
HDGFL3
ABCC5
POLR2J3
ZNF576
METTL2A
IRGQ
RUVBL1
ESCO1
EML1
NBPF4
ZNF398
TEX22
SPRED2
MX2
SLC13A2
EIF3D
YPEL3
TMEM205
RAB3D
OSER1
GDPD3
CCDC159
CALML5
RNF223
DDA1
PPM1A
OSBPL2
GSN
FBP1
CCDC9
ZNF514
ZNF2
SPTLC2
LYRM1
DCUN1D3
SCIMP
SNRPD2
QPCTL
CCDC149
AP4E1
ANKS6
ERMP1
PPCDC
PNPLA7
MRPL41
ZNF572
EPN3
ZFHX2
THTPA
CTCF
VPS11
BPNT2
UCKL1
RNFT1
AADAC
HELB
BANP
PALM3
NEUROD4
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
NDUFB6
TRIM59
LINGO1
GSTP1
DHX40
USP31
TFIP11
MIER1
DNAI4
CCDC97
ZMAT2
TEN1
HARS2
HARS1
CDH18
AMOTL2
ACOX1
NFKBIZ
MARCHF10
IPO11
FTH1
DIMT1
UEVLD
TMTC3
CEP290
RAB7A
SUSD2
SULT2B1
OSGIN1
GTF2H2C_2
GTF2H2C
ANKRD13D
WDR55
DND1
KLK12
HOMER2
SMIM6
GRHL2
DCP2
COX16
ASB2
JUND
IQCN
UMAD1
MAFK
CAP2
TOB1
SLC51B
RMND1
GPSM1
DNLZ
CARD9
ARMT1
CIB3
BCL2L13
ATP6V1E1
ZNF285
FURIN
VPS33A
SCAMP4
PARP10
GRINA
ADAT3
DSTN
BFSP1
RMDN2
PARP16
PPM1E
NOC2L
KLHL17
ZNF44
EEF1AKNMT
TTC9B
SDC1
GGCT
CCNP
AHCYL1
PRKAB2
CHD1L
CALM1
UMODL1
CSNK1A1
YWHAZ
SEPTIN9
HYAL2
HYAL1
EIF4A2
EIF4B
GIPC1
CST1
EFHC1
UBALD1
MGRN1
GTF2A1
KIF21A
TMBIM6
TACR2
P2RY6
TNFAIP1
IFT20
HHATL
GRHL1
ABCF3
TDRD9
MRPS30
ATP5MPL
PKP2
MAB21L4
ITIH6
CROCC2
PACSIN3
GRPEL2
TNFAIP8
BICD2
VMAC
NDUFA11
CLK3
CAPS
UBE2K
SLX1B
SLX1A
NUDCD3
BOLA2B
BOLA2
TRIM4
LAD1
GJC3
RIN2
JUP
TPTEP2-CSNK1E
SSBP2
MRPL33
UFL1
NTMT1
CD55
C9orf50
LPIN1
TSC22D1
TMEM107
PDE12
NEK10
XKR7
GPRC5A
GOLGB1
RTF2
RGL2
PFDN6
FGF19
TJP2
PRSS41
KLHL12
EVL
ACOT7
GSTA4
LFNG
CEP128
ZWILCH
ZNF277
TRIM47