ChIP-Atlas: Target genes

Potential target genes for PRPF4

Query protein: PRPF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4708032 | Hep G2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
PRPF4's Target genes

◢ PRPF4: Average

◢ SRX10976818: Hep G2

◢ SRX10976819: Hep G2

◣ SRX4708032: Hep G2

◢ SRX10976790: K-562

◢ SRX10976791: K-562

◢ SRX4708080: K-562

◢ PRPF4: STRING

NGB
PMF1-BGLAP
PMF1
C1orf198
MAMDC2
KIF5C
SCML1
ADGRG1
ACSL3
CNOT3
WDR74
STX5
MTRNR2L8
MTRNR2L9
FAM234B
NCOA7
APBB2
HOXA4
HOXA3
TMEM216
RPL35
ARPC5L
B4GALNT3
TEDDM1
GLUL
MTRNR2L2
MSH3
DHFR
MTRNR2L1
RTF1
CCDC200
OGA
LOC102724770
DGCR6
MAPK11
HSPA6
RNF213
RAD23B
RGPD2
RGPD1
CIC
DUX4
ATXN2L
NABP1
LIMCH1
PPP1R15B
ZFAND6
LTA4H
EIF4B
TRIM48
CACNB2
ZBTB40
BRD3OS
IL32
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
MEMO1
ZNF195
ADAMTS9
GJB6
MTA3
PRRC2B
MPP5
VARS2
GTF2H4
OR1F1
SSX5
MTRNR2L10
HNRNPA2B1
CBX3
UBXN8
MED1
CDK12
PRRT1
PPT2
EMILIN2
RBM38
RPA2
BCL9L
ZFP36
PLEKHG2
UNC45B
NLE1
SKIDA1
SCGB1C2
SCGB1C1
ODF3
GPM6A
MTRNR2L6
NOMO2
BRWD1
PRR14
FBRS
RAB32
H2BC17
H2AC17
OR2B2
SNX16
CDH15
ZC3H11A
ZBED6
MAP4K2
MTX2
C1QTNF8
ABCB1
STRC
HBP1
P3H4
FKBP10
CYP4F11
EIF3E
UBR5
CDH1
SMO
MUC3A
AFAP1
SASH1
RFC1
BRD2
NOMO3
ABCC6
ZNF184
ZNF329
GPRC5C
MADD
NDUFS7
RMI1
HNRNPK
BAZ2B
C8orf37
KIF3B
CBX4
FAM222A
RHCE
ST3GAL6
RCOR3
METTL9
MPZL1
TTYH1
GPAT4
PHF21A
MSX1
UBE2F
SLTM
TICRR
HMGN4
AGPAT3
NGDN
PSG11
MYNN
ACTRT3
PAFAH1B2
RASSF4
NPR1
ILF2
FBXL20
ZNF148
APOC1
ABTB2
NEMF
C20orf204
A2M
RBM39
QPRT
SLCO2A1
SELENOV
TFPT
PRPF31
PLEKHB1
ADNP
LARS2
ARHGAP11A-SCG5
ARHGAP11A
RAB43
FMN1
MORF4L1
CRABP2
LOC100509620
MARCHF7
DNAJC11
LAMA5
MRPS14
RPL27
IFI35
NOP14
GRK4
KYNU
HECTD1
BIN1
FRG2
SLC25A39
MCM5
TNFAIP3
FCGR3A
MAPK1IP1L
HES7
ALOXE3
DCT
FOLR3
FGFR4
RMND1
ARMT1
PFKL
TEAD2
DKKL1
MTCH1
LASP1
TMEM131L
SCAF8
ZBED9
SEPSECS
ZNF740
CSAD
KAZALD1
NTAQ1
CDT1
APRT
MDM4
MKRN3
MRPS22
RPS15A
CLDN9
CLDN6
DUS1L
DHRS4L2
NFIA
MGAT1
PPP1R3E
TRNP1
HOMEZ
ADRA2C
YAP1
RGS14
LMAN2
TMEM107
KBTBD7
BORCS6
CYP2W1
ORC2
PUM2
ZNF558
COL22A1
CTBP2
KMT2E
ANGEL1
IGF2BP1
SH2D3C
CDK9
SNX1
CIAO2A
OR2V2
C1orf210
FRG2C
NPDC1
ENTPD2
GTPBP4
KDM3A
SOWAHA
TFG
HNRNPDL
ENOPH1
ZNF358
MCOLN1
LOC100130520
CD300H
C17orf77
SEMA3D
ATF7-NPFF
ATF7
TMEM262
SMTNL2
AKIRIN1
HEXIM1
CNP
RNASE4
ANG
DGAT2
ATP5MC3
NUP93
PABPN1
RNF11
POLG
OPN1SW
CCDC136
ZFP36L1
NFAT5
ETV4
PHF23
GABARAP
DVL2
NPAS4
HMOX1
PSMB3
PCGF2
UBE2D3
RNMT
FAM210A
WAC
TYRO3
RBM17
TMEM60
PHTF2
NDUFA12
VMAC
NDUFA11
FOXJ1
RIPPLY1
CLDN2
PTMA
GRB7
OBSL1
INHA
WWC2
GATAD2B
TMPRSS3
YTHDF2
RFX5
SEPTIN7
PIP4P2
PPP4R2
UPF2
PLIN2
HNRNPA3
COL23A1
DOT1L
NOMO1
TCEA2
SOX18
DPH3P1
SERTAD3
ELOVL2
NAA38
CHD3
PPP1R14B
PLCB3
LOC114841035
FKBP2
FUT5
DR1
FHL2
THAP5
DNAJB9
GIP
CNOT4
RHBDD3
EWSR1
ASGR1
LIN28B
CHD8
PARN
BFAR
NR5A2
HNRNPU
MAPK13
AJM1
NAPEPLD
HDAC4
MGST1
HSF2
TESMIN
OR2T1
NVL
CRYBG2
CORO2A
TMEM139
CASP2
ATP9A
UBQLN2
GNAI2
CLOCK
SCN1A
ZNF76
KDM6B
TBC1D15
H4C12
H4C11
H2BC14
H2AC14
ZBTB2
MTF2
MOCS3
DPM1
COBLL1
H2AC4
POLE2
KLHDC1
H3C3
H2BC3
GADD45G
TOB1
DHRS4L1
ARHGDIA
HNRNPH1
TMEM242
SREBF1
TMEM106B
STX16
INSIG2
XPO1
BCOR
SPAAR
SHH
HRCT1
SIRT6
ANKRD24
ZBTB46
PBLD
HNRNPH3
USP47
SENP7
PGGT1B
E2F8
TEX14
RAD51C
ORC4
MBD5
HCFC2
GLT8D2
TBC1D19
H3C10
H2BC13
H2AC13
INKA2
DDX20
UCKL1
SPTSSA
NR2F1
FAM53C
CDC25C
TUBB2B
SNRNP35
ZDHHC5
CLP1
PGAP1
CWC25
FNTA
NDUFAF6
PPP1R13B
ZNF106
SNAP23
TMEM79
SMG5
DBR1
PRORP
PPP2R3C
H3C6
H2BC8
H2AC8
G3BP1
CNOT1
H1-3
CASQ1
ZFAT
OGFOD3
HEXD
SOX12
UBE2E2
USP39
C2orf68
TMEM150A
ATAD2
SPATS2
TUBGCP3
MFNG
PEX3
ADAT2
TMEM191C
SRSF5
PYGM
TNRC6A
EFNB2
SCARB1
SEPTIN2
HDLBP
ADGRL1
PGAM1
ERCC2
ASGR2
RHOB
RPS11
RPL13A
METAP1D
EPHA2
ADM
TST
MPST
DCLRE1B
AP4B1
H4C9
H2BC12
H2AC12
H2BC11
H2AC11
H2BC15
H2AC15
H3C12
PRDX1
H2BC21
H2AC21
H2AC20
SPATA33
H4C2
H3C2
EEF1A1
H2BC5
H1-4
SRSF6
H4C5
H4C4
H3C4
H2BC7
H2AC7
HERPUD1
EIF1
ACTB
SRSF2
MFSD11
SRSF7
FUS
UBE2S
H4C14
H3C15
H3C14
H2AC19
H2AC18
H1-2
ATF4
UBC
HMBS
H2AX
DPAGT1
RPS12
UNK
H3-3B
H4C15
METTL23
OAZ1
MAT2A
NXF1
PPIA
SLC35B2
HSP90AB1
DDX3X
ADARB1
MTHFD2
BBC3
POLG2
DDX5
CEP95
SLC9A1
RPLP0
GCN1
TBL3
RPS2
RPL3L
RNF151
NDUFB10
RAD23A
FARSA
CALR
C19orf48
DDX19B
AARS1
STX10
IER2
NXPH3
NPM1
FAM174C
CIRBP
RPSA
FOSL1
CCDC85B
GTF2IRD2
HSPA5
TMEM167B
TUBB4B
STPG3
FAM166A
MCL1
H3C13
H2BC18
RPL3
SESN2
TSPOAP1
TSEN34
RPS9
P4HA1
E2F3
EGR1
TRA2B
ATF3
HSPA1B
HSP90AA1
ACTG1
IER5
FTL
RRM2
HNRNPAB
RPS20
RPLP1
JMJD6
DDIT4
H2BC4
H2AC6
TUBA1B
DUSP1
YDJC
CCDC116
LOC100996842
EIF4A1
CD68
JUNB
RHEB
HSPA9
TRMT2A
RANBP1
TOP3B
H2BU1
H2AW
ASNS
UBE2L3
CTNNB1
TRIB3
RPS3
NASP
NUP214
RPS23
ATP6AP1L
FTH1
CYCS
FOS
JPT1
CCNL1
CHAC1
MPC2
DNAJA1
DCAF6
APTX
SKP1
GARS1
PRAME
ENO1
MPDU1
TFRC
GTF2IRD2B
CSRNP2
HMGA1
RPL13
NRF1
UQCC3
PABPC1
LBHD1
CSKMT
C11orf98
PTPN6
C12orf57
CALM2
POLR2J3
SRRM2
EIF4A2
EAPP
C6orf62
SLC3A2
CEBPB
MYLIP
TUBA1C
TAF1D
C11orf54
NOXO1
ZNF467
SUPT5H
STMP1
RPS16
RPL12
LRSAM1
MRPL40
HIRA
SLC16A1
EIF3J
BAIAP2
H4C13
H3C11
H2AC16
H1-5
KPNA2
ZNF143
ARL6IP1
DDX21
NUCKS1
RCC1
LDHA
BZW2
ANKMY2
FAM83D
DGCR8
RPL10A
MATR3
HMGN2
TMSB4X
FSCN1
NCL
KLF6
TAF15
SLC1A5
SFPQ
SETD5
SLC38A2
BCR
EHD1
MUS81
CFL1
H3-2
LRRC25
GDF15
TLCD1
RPL23A
RAB34
PROCA1
NEK8
ODC1
H4C3
H1-6
KDM3B
PCBP2
NFYC
AFF1
PHF13
MED15
PRKAG1
PARP16
BAG3
OVOL1
CSDE1
AP5B1
SOD1
LZTR1
RPS8
H2AZ1
DNAJB14
SUB1
PPP1R10
MRPS18B
ATAT1
RFWD3
NFE2L2
SLC20A1
ENOSF1
PCK2
NRL
CD55
BCLAF1
WDR38
XPOT
NOC4L
DDX51
SECISBP2
CKS2
WDR4
GTF2A1
SPDYC
RPL5
GPS2
EIF5A
GAPDH
ZBTB4
SLC35G6
POLR2A
SRSF10
CA8
TAF12
RPL36
MICOS13
HSD11B1L
STMN1
PCBP1
SLC39A10
CSE1L
YBX1
ATF1
CITED2
YWHAG
VCL
EEF2
NBEAL2
CCDC12
MYO1G
DDX59
RPS3A
ARL15
SRSF3
LRCH4
FBXO24
TMPO
MYL12A
UAP1
SRSF1
BCL2L13
H1-10
GHITM
TUBB2A
LRPPRC
WASL
TMEM267
RSAD1
HSPA8
CHAD
ZC3H4
SIRT4
DYNC2I1
GADD45A
RPS5
RNF225
NUFIP2
CASKIN1
CANX
MCM7
EIF4G2
AP4M1
DNAJB1
ATP6V1E1
CCT8L2
PTP4A2
SNAP29
PI4KA
PEX5
PPIF
TAF9
RPL18A
RAD17
C12orf65
AK6
ACTR3
TXNRD2
COMT
CLPB
RPL15
NOP56
NKIRAS1
DMTF1
TNFSF9
NOTCH2NLC
KCNK5
LSM8
SREK1
CDK11B
CDK11A
RPLP2
PNPLA2
PIDD1
DNAJB4
ILF3
H2BS1
TENT5C
HNRNPL
HMGB2
VAPA
PSMG2
CEP76
UBR4
TIGD5
EEF1D
FKBP5
ARMC12
HNRNPD
SLC35E2A
SF1
HNRNPR
GORASP2
VEGFA
TBL1XR1
NOTCH2NLB
NOTCH2NLA
WDR1
NOTCH2
ZCWPW1
PPP1R35
MEPCE
LUC7L2
XBP1
STT3B
ZBTB45
TRIM28
RPS13
C6orf47
BAG6
APOM
RRP1
SLC35E2B
ETF1
POLR3D
GTF2I
IPO7
TPT1
CTSC
EIF5
EIF2D
SDF2L1
ANO10
ABHD5
GTF2H2
SDCBP
MAP1LC3B
FBXO31
ID1
TPI1
SPSB2
ZNF517
ZNF34
RPL8
POLR2J2
SUPT3H
FLOT2
DHRS13
ID2
WDR25
WARS1
TRIAP1
HIC2
COX6A1
TMEM41A
SSU72
ACBD6
TTYH2
TRIM25
RPL38
TBRG4
ZNF274
LRRC37A3
ZC3H6
EIF2S2
ANKLE2
TAF4B
MXD1
CALM1
TMEM68
TGS1
DHX9
SMAD5
PSAT1
SMC1A
RIBC1
DRAP1
C11orf68
RPL14
SH2B3
PTP4A1
ICE2
CZIB
IFRD1
AHCTF1
DNAJB12
EIF4E
TYMSOS
TYMS
PCF11
YWHAZ
TRMT1
PTPN9
NACC1
DEDD
VPS52
RPS18
B3GALT4
H4C8
LMNB1
ERMARD
TBC1D22A
HEXIM2
MKNK2
CRKL
UCHL5
STYXL1
RPL17-C18orf32
RPL17
RO60
MUC2
MDH2
H3-3A
FAM3C
C18orf32
TP53BP2
TOB2
HNRNPF
SNRPG
NUP62
LRRC59
IL4I1
FAM136A
ATF5
NFE2
MRPL35
IMMT
EFCAB2
ZFAND5
FLYWCH1
RPL32
FBXO5