ChIP-Atlas: Target genes

Potential target genes for CDK12

Query protein: CDK12
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5975305 | 143B
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDK12's Target genes

◢ CDK12: Average

◢ SRX5975300: 143B

◣ SRX5975305: 143B

◢ SRX14276667: 293

◢ SRX1144285: Jurkat

◢ SRX5975310: MG-63

◢ SRX5975315: MG-63

◢ SRX728789: THP-1

◢ SRX728790: THP-1

◢ CDK12: STRING

RGPD2
RGPD1
MTRNR2L2
MSH3
DHFR
MTRNR2L8
MRPL21
IGHMBP2
MTRNR2L9
COL23A1
STMN3
RTEL1
PMF1-BGLAP
PMF1
ZBTB45
SUGCT
MPLKIP
MTRNR2L1
CCDC97
DPY19L4
TBC1D19
ACSF3
WDR74
USP30
NME1
ZMPSTE24
STX16
EMILIN2
AAR2
EIF1AD
BANF1
MTBP
MRPL13
UBE3B
KCTD10
CSTF2T
ZDHHC6
VTI1A
RAD54L2
ZNF276
VPS9D1
OTUD7B
MAN2C1
GOLGA3
GTF2H2C_2
GTF2H2C
MUC3A
CCDC57
STX18
PEMT
ZNF408
ARHGAP1
MAIP1
DUS1L
RTTN
BMS1
TARS2
FEM1B
EIF3F
ISY1-RAB43
ISY1
MED23
WDR83OS
WDR83
MAN2B1
REXO4
ADAMTS13
GTF2H2
NR1H3
ACP2
SUPT7L
SLC4A1AP
ITGB3BP
EFCAB7
SLC35A3
RNF6
DCP1A
GTF3C5
MRPL44
BBS1
B4GALT7
FRA10AC1
SEC13
NUDCD3
CHCHD2
VPS13B
SLC33A1
IPO4
SMG8
EDC4
SNX16
ZNF296
GEMIN7
NOL12
ZNF561
ZNF165
ALKBH3
SLC24A1
NDUFS7
TMEM41A
NDUFS3
KBTBD4
DCAF10
WDR24
ADPRHL1
PDE6D
COPS7B
TACO1
PSMG3
NDUFB3
FAM126B
UBA5
ACAD11
HUS1
VPS52
RPS18
NR1H2
MLEC
CGGBP1
C3orf38
CCAR2
C8orf58
RFXANK
BORCS8-MEF2B
BORCS8
INTS12
GSTCD
HEMK1
C3orf18
HMGB1
USPL1
MRPL48
PTPN21
DMAP1
TTC4
SCAND1
NOL8
CENPP
CDK5RAP1
MRPL1
ALG10B
NOXA1
COX16
ZNF770
WDR11
HDAC8
MRPS31
WBP1
INO80B
TRIM48
ZSCAN22
RRP15
PHB2
EXD2
STOML2
COMMD2
PSMF1
TEDC1
CRIP1
TOP3B
RBBP5
AURKAIP1
NOP16
HIGD2A
TRIP4
SENP1
PFKM
ANTKMT
PSD
FBXL15
PIH1D2
NKAPD1
MRPS18C
HELQ
NMNAT1
LZIC
MRPL40
HIRA
C10orf88
FAM207A
GFM2
TMEM222
TNPO3
MNAT1
GTPBP3
ANO8
MRPL3
DUX4
MAMDC2
SLC39A4
CPSF1
POLR3B
SF3A3
ZNF791
ZNF490
ZNF391
VPS25
BLOC1S6
DSTYK
MKRN2OS
MKRN2
C11orf49
GMEB2
TIGD1
EIF4E2
DRG2
TVP23B
MRPL30
MITD1
TEX38
ATPAF1
BCAT2
TATDN3
NSL1
UTP3
MST1
MRPL16
NDUFC2-KCTD14
NDUFC2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
GTF3C3
ZKSCAN8
ZNF302
WDR97
MAF1
CPPED1
AQR
FAM98B
GALK2
COPS2
SPAG8
HINT2
SLC39A13
SELENOH
STARD3
ZNF205
LSG1
YIPF2
TIMM29
MEIG1
TSPAN10
NPLOC4
HNRNPA1L2
YBEY
MCM3AP
SMG7
SLC25A53
THEM4
VPS45
CLK3
SNAP47
JMJD4
LRRC49
THAP10
CYREN
FAM227B
DTWD1
PEX3
ADAT2
NSFL1C
MTERF4
COQ3
MTOR
PUS10
PEX13
TRUB2
COQ4
FBXO22
MRPS22
RPL37
METTL9
YIPF3
POLR1C
TEFM
AGK
ARL6IP4
TOR1AIP2
TOR1AIP1
BRF2
TXN2
TIMM9
KIAA0586
FAM228B
SF3B6
PLEKHM3
TRDMT1
CFAP298-TCP10L
CFAP298
ZER1
EIF2D
PCYT1A
RPS7
SNRPD3
GUCD1
C18orf21
TMEM101
DDX1
RPL29
NME3
MRPS34
EME2
RUVBL1
EEFSEC
STPG3
NELFB
MARK3
TMEM69
GPBP1L1
NUDT5
CDC123
SSBP1
NUP54
MPHOSPH10
MCEE
SLC44A1
WDR31
MTIF2
PIGL
NCOR1
SAR1B
GTF2H4
SLC39A3
C12orf73
LTN1
DLST
TUT1
NUF2
ALG10
PPIL3
NIF3L1
TMA16
BANP
PPIL1
C6orf89
PDCD6
PCID2
CUL4A
LMAN2
WDR36
TBC1D13
TMEM242
ZNF581
ZNF580
CCDC106
ZBTB11
KLHL20
ERI1
CCNC
FAM118A
MRPL58
MTRNR2L10
LAS1L
DHX33
NXT2
GRPEL2
RAG2
IFTAP
ANAPC5
SREK1IP1
CWC27
OPRL1
LKAAEAR1
CACNG8
PRRG2
NOSIP
INTS5
WDR25
WARS1
SNRPB
DNAJC25-GNG10
DNAJC25
NAA20
TTC26
TMEM68
TGS1
YY1
MTMR9
ZNF195
C17orf75
ZNF461
DDT
METTL15
KIF18A
SEC11A
RFC4
C16orf46
PPIP5K2
KCTD5
PTPRM
VWA8
ZNF562
DNAJC24
DCDC1
ZC3HC1
RAB18
MTRF1
C2CD2L
DPAGT1
ERCC6L2
FRG2C
MED18
EMC4
MRPL39
ANKRD40
TSSC4
SRP19
MAP2K5
KRR1
PHKA2
TYW1B
YJU2
CCDC200
TRAPPC10
SIT1
ZNF846
CNPY3
NKAP
NEU3
SLC25A21
COA6
ZNF564
TM9SF3
ACBD6
MTMR4
DPP9
SDHAF3
MTHFD2L
FAM168A
MCAT
TYW1
SBDS
ZNF410
LSM5
SEC22B
NFKBIL1
ATP6V1G2
PPP1R11
UBIAD1
ZSCAN12
TIGD6
HMGXB3
OSGIN1
SPCS1
GLT8D1
SMIM26
MBTPS2
FBXW8
PSMC2
DNAJC2
MFAP3
FAM114A2
NUDT4B
NUDT4
ZNF623
LIG4
ABHD13
DNAJB12
GFM1
MRPL53
SPATA5L1
GATM
CLOCK
CAP1
RSPH3
TMEM30A
SMIM19
SLC20A2
RBM28
VIPAS39
AHSA1
PUM3
AGO3
TMEM249
SLC52A2
FBXL6
ZNF622
ZSCAN9
PRORP
PPP2R3C
DDTL
RPS20
KNSTRN
AP5Z1
UQCC1
SH2B1
TUFM
MTG1
ZBED9
FBXW11
LRRC58
GORASP2
TUBGCP3
EXOSC3
CBLL1
PRSS27
TDP2
ACOT13
NVL
UFC1
ATG5
SNRNP200
TMEM199
POLDIP2
PTPN6
C12orf57
TTC14
ZNF549
MAGEF1
ZKSCAN4
ALDH3A2
MTR
TMEM128
CDC16
ZNF596
C21orf91
LRRC24
C8orf82
TXNDC9
EIF5B
PRKAB1
PSMD6
TTC23L
KIF22
GPAA1
EXOSC4
PYURF
PIGY
HERC3
SPDL1
JRK
UNC50
COA5
TPD52L2
ABHD16B
PROSER1
NHLRC3
NOTCH2NLC
NOTCH2
COPS4
METTL6
EAF1
CARD8
C19orf67
POC5
ZNF668
ZNF646
PSME3
STMP1
RSL24D1
PDCD6IP
MLLT11
CDC42SE1
DISP1
LCORL
DCUN1D5
DDX21
WDPCP
MDH1
NUP153
NUP107
B3GALT4
SEC16B
MKRN3
POLDIP3
PDCD2
GABPA
ATP5PF
FRG2
RPS4Y1
ZNF579
OPA1
TEX9
RFX7
TMEM107
C8orf33
NSUN4
IPPK
PPID
ZNF558
AVL9
ZNF570
ZNF569
DPH7
NGB
PIGQ
NHLRC4
FBXO28
C1orf198
ECHDC1
VIM
OGFOD2
SIRT4
USE1
LSM10
LRRC8A
KYAT1
NFIB
SRSF7
CCDC152
FBXW2
FKBP3
FANCM
CSTF2
NOTCH2NLB
NOTCH2NLA
C4orf3
TAF12
EIF3D
NDUFA12
VPS26C
SDR39U1
STK3
MVB12A
H4C14
SPATC1L
C8orf76
HSP90AB1
H4C15
SUGT1
PSMD11
NDRG1
PNPO
SPAAR
SCRIB
TOMM22
NIPBL
FIP1L1
INVS
ERP44
OSGEPL1
H4C11
GOSR2
MANBAL
SPATA6L
PLPP6
GPR137
NOP2
ZBTB4
SLC35G6
RXYLT1
POLR2A
PER1
EIF3H
MPDU1
LOC100996842
KLHL9
CD68
SNRPD1
PRPF18
NCBP2AS2
NCBP2
ZNF35
NFKBIZ
NBPF1
TTLL12
ABRAXAS1
DTD1
SLF1
KIAA0825
LINGO1
CCNL1
CALM1
SLC35C2
VPS36
SRBD1
CKAP2
FUBP3
EFR3A
ZCCHC7
SRSF2
MFSD11
HIPK1
CCN2
DDX18
ATF6
TPRKB
PRDX1
WDR4
MFSD14A
MCL1
EIF4A3
RARS1
NCAPD2
MRPL51
ETV5
GLO1
JPT1
EBAG9
APTX
RPS27
RAB13
SLC30A6
DBF4B
ARID4A
SCNM1
RPLP1
LYSMD1
SLC9A1
EFHC1
MTAP
CHIC2
AMDHD1
H3C13
H2BC18
RPS6
JOSD2
ASPDH
BBS10
TARS3
ARHGAP29
TRAM2
RHOB
GOLPH3
CAST
RREB1
DIS3L2
CLTA
LRRFIP2
RMDN2
POLR2J3
KMT2A
PCDH9
KAT6A
EIF4A1
ADAR
KIAA0100
TUT7
SLC50A1
DPM3
TANK
TM2D3
KIF23
HP1BP3
PLEC
STAU1
DDX19A
CMC1
ADPGK
POLR2M
CCDC14
POLR1B
S100A10
GLI4
LMNA
TLCD5
HSPBP1
BRSK1
SARAF
PRPF3
RAD23A
APMAP
PHGDH
ZC3H10
RPL41
H3C15
H3C14
H2AC19
H2AC18
PIGC
ATAD2
SLC3A2
FOS
STYXL1
RCC1
MDH2
CEP350
UAP1
MAPKAP1
HERPUD1
CLCC1
ETV4
LATS1
ZNF101
C15orf61
STK17A
WTAP
SOD2
GGPS1
ARID4B
ZNF197
CCDC22
CACNA1F
ZNF669
SEC31A
MAT2A
DBNL
CTR9
ZBTB40
SSNA1
IMPACT
H2BC21
H2AC21
H2AC20
ANAPC2
UGGT2
SPTAN1
ELAVL1
LRRC37A3
DYNC1LI1
PCIF1
NXF1
ZNF326
TSSK6
NDUFA13
KRTAP29-1
KRTAP16-1
EIF4G2
XBP1
PPIF
NBPF15
JOSD1
GTPBP1
DCBLD2
ANO10
ABHD5
VPS53
UBLCP1
TSPOAP1
MRPL54
GADD45A
APBA3
UBE2S
IPO7
PSMD3
WDR48
WDR43
TMEM50B
SCN11A
RPL6
PERP
MAN1A2
CDC42BPA
GEMIN2
ARL6IP1
PDE4DIP
AKAP13
TMX4
PABPC4
ELMOD2
ZNF768
SDCCAG8
FAM133B
CEP170
WDR37
PGAM5
IDI1
ASPH
ZNF697
MDM4
HNRNPAB
AHR
HEATR6
SEC61G
CDK12
SSRP1
SNAPC3
P2RX3
GMFB
RHOT2
JAK1
CCZ1B
FBXL2
DDAH1
CCN1
PCBD2
LYPLA2
TMEM230
TMEM129
TACC3
PLSCR4
AZIN1
ARMC1
ZSWIM6
TXNDC11
SLC35D1
MYCBP2
GIGYF2
CUL1
APEH
TMEM43
RNF151
NEPRO
LCMT2
CHCHD4
ADAL
TMEM79
SMG5
RBM43
CCZ1
RHOU
AKIRIN2
NFKB1
ITGB1BP1
CPSF3
UTP23
MAP3K20
EBNA1BP2
CFAP57
AKT3
SMURF1
PSMA5
INTS6
SPG11
FAM187A
EFTUD2
DIAPH1
CCDC103
MKLN1
ZSCAN25
ZNF12
SLC37A3
DHPS
PSEN2
CLN5
STXBP3
KLHL15
CTNNAL1
CNOT6
ZBTB26
YRDC
QRICH1
PARP11
MKRN1
C1orf122
ZBTB21
PARP10
NAA50
EIF1
ATP6V1A
TPRA1
MUC1
CDC25A
ZNF148
STRIP1
MINPP1
YBX1
KLF6
H4C12
DESI2
MORC3
GATAD1
DPM2
RNF224
RNF208
PPP1CC
PPAN-P2RY11
PPAN
PIAS1
MOV10
CYSRT1
ANGPTL6
SYNCRIP
PARP1
ZNF143
SLC30A5
RPS2
RBM34
NDUFB10
NDFIP2
H3-3B
ENPP4
CLIC5
WDR27
SLTM
SLC25A32
SAV1
MAP4K3
INTS2
DCAF13
C6orf120
TCHP
PARP2
KLHL25
EIF3A
ABL1
TLE4
SYNGAP1
OSER1
MIB1
CUTA
CDK17
TRIM4
HNRNPU
TTLL11
SENP6
LPIN1
EP300
ACSL3
ZBTB37
TMEM267
SELENOT
FPGS
COX20
YWHAG
TRIM24
CLPTM1
BICD1
TBC1D4