ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: CPSF3 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◣ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

FRG2C
DUX4
MTRNR2L1
CCDC200
FRG2
H3C15
H3C14
H2AC19
H2AC18
ZNF335
ZC3H10
RPL41
GH1
MAPKAPK5
TSN
RABL2B
B3GALT4
C6orf226
RABL2A
PHF23
DVL2
PGK1
SRD5A1
NSUN2
POLR3F
DZANK1
CACTIN
H2BC4
H2AC6
NVL
MTRNR2L2
MSH3
DHFR
EDC4
SNAPC5
VPS28
DYNC1LI2
RPL17-C18orf32
RPL17
C18orf32
VTI1B
SYCE2
H2BC11
H2AC11
NUP85
RPS18
ICE1
KRBA2
H4C12
VDAC2
H2AZ1
DNAJB14
IPO13
UBE2M
CHMP2A
VEZF1
MUC3A
COX20
IER3
FLOT1
H4C11
NME6
SCRIB
WDR74
PHF1
H4C3
H1-6
RWDD1
SUMF2
COL23A1
H2BC5
H1-4
SYNRG
OAZ3
REXO1
MRPS7
MAZ
GGA3
VPS52
NRAS
C19orf48
ATAT1
POLG2
PSMD12
JUNB
LYRM4
FARS2
H4C14
SLC35B1
DHPS
H2BC21
H2AC21
H2AC20
MPDU1
LOC100996842
CD68
NCLN
AMDHD2
SUCLG1
RRP36
MEA1
ZNF576
IRGQ
TAOK3
SUDS3
HSPA9
DNAJC9
C19orf53
H1-2
CAPRIN1
FAM187A
EFTUD2
CCDC103
ZNF34
RPL8
H4C15
UBE2I
H4C9
ID3
CUL7
RBBP5
PSMG2
GOSR2
CEP76
UPF2
H4C2
NAT10
FAM131A
EPN1
POLR2E
MTRNR2L8
SECISBP2
RIT1
FTH1
AKAP8
EXOSC5
BCKDHA
MSH4
ARFGAP2
MAMDC2
CHD2
H4-16
H2AJ
DCTN1
VARS1
BLCAP
IFITM1
NDUFAF3
DALRD3
INPP5E
RPL22L1
MRPL11
IFITM3
MRPS5
NUP205
ATP5F1E
H4C1
RPS11
APOM
SLC3A2
PRRT2
PAGR1
DDIT4
H2BC12
H2AC12
HADHB
HADHA
RCC1
HMGB1
STAM2
RAD23A
H3C2
SLC35E3
ABTB1
TLCD1
NEK8
CDC73
ACTR10
RHOB
JMJD7-PLA2G4B
JMJD7
H3C13
H2BC18
COX7A2L
ZNF581
ZNF580
RPS2
NDUFB10
PSMD1
POLR2J3
PRKAG1
STUB1
JMJD8
GCN1
SNX16
GGA2
HES7
ALOXE3
SLC38A2
RNASEK
C17orf49
H2AC4
TSNAX
PAK1IP1
C6orf52
SEC61B
COMMD1
CCT4
STAM
PFDN5
MYG1
GPAA1
EXOSC4
TUBB
CXorf38
PCBP1
DDAH2
SCAMP3
STX10
IER2
GADD45B
IFITM2
SART3
ISCU
IER5L
SIRT7
ARHGAP4
RPS23
ATP6AP1L
PRKRIP1
SKP1
PI4KB
RABGGTB
ADM
KMT5B
IDI1
DHRS11
SLC39A7
RXRB
HSD17B8
DPH7
SUPV3L1
SRSF11
ARHGDIA
TMEM107
NADSYN1
DHCR7
C12orf57
USP1
PDAP1
BUD31
PYGO2
LOC101928120
RABL6
PES1
TMSB4X
MRPL40
HIRA
GPN2
RING1
RPL13
ZNF653
NDUFA4
ZBTB45
PDE4A
FAM228B
IQCG
MRPL53
DAPK3
SF3B6
POMZP3
CDK11B
CDK11A
FAM174C
TBK1
ZRANB2
UGT1A3
CCDC34
SNAP47
ADK
FARSB
HMCES
ATP5MG
TRIM8
MAD1L1
EPN2
FLOT2
TMEM230
KMT2A
CIRBP
GRAMD2A
NOP53
E2F3
RPL21
EIF4ENIF1
PTGES2
SH3BGRL3
DONSON
TAF9
RAD17
AK6
TIMM13
TM9SF1
TMEM132A
SELENOF
HS2ST1
MMP24OS
MMP24-AS1-EDEM2
H2BC7
GET4
FUT11
ZFP36L1
ZNF446
NDST2
H4C7
H3C7
H2BC9
MAPK8IP3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MOV10
OAZ1
PSMG1
MAML1
ZNF276
VPS9D1
RPS27A
CLHC1
MID1IP1
H4C5
H3C12
H2BC17
H2AC17
COX18
TUSC2
CCDC24
H2AX
H3C4
H2AC7
C5orf24
EIF2S3
SSC5D
NAT14
TOM1
GPANK1
C6orf47
MT2A
CCDC107
PFN1
BRWD1
GTF2A2
PNO1
NANOS1
PIN4
SLC25A10
SIX5
PDHX
GAPDH
APIP
NFKBIL1
HMGN2
DDX39B
ATP6V1G2
WDR90
MRPL24
NOLC1
UCKL1
ACP4
TMSB10
IKBKG
G6PD
H3C1
H1-1
AXDND1
FTL
RGL2
ID1
CDH24
DYRK1B
NECAB3
CAPNS1
RPL13A
RPS28
NDUFA7
H2BC8
H2AC8
SPATC1L
TRIM37
LRRC24
BAZ2A
STAG1
C8orf82
ARHGAP39
ZFX
RNF151
ZNF48
CYRIB
IGF2BP3
KIF2C
VWA7
NPM3
FGF8
RNF167
GADD45GIP1
WBP1
INO80B
H3C10
H2BC13
H2AC13
PCBD2
RPS29
CDK16
NXF1
GANAB
CISD3
SEC31A
SCFD1
RCOR3
MDP1
CHMP4A
EXOSC6
VARS2
TAF10
PIP4K2B
PNMA1
TNFRSF12A
THOC6
HCFC1R1
PHLDA1
ZNF513
SLC25A11
CCDC138
PDCD2L
GMPPB
AMIGO3
ANAPC7
FIBP
CCDC85B
MAN2C1
DRAP1
C11orf68
GOLGA5
PCBP4
FBF1
SURF6
H4C8
UBC
SELENOH
WDR6
H2BC15
H2AC15
NOP14
GRK4
BAG6
ENO3
CD320
POLD1
RCE1
SPHK2
TBCK
AIMP1
RXYLT1
NKIRAS1
TMED1
GSTO2
FAM83E
RPL18
MRPL38
CEBPB
XRN1
MRPL28
CSKMT
C11orf98
MRTO4
EMC1
LDHC
RPL10
EIF1
RPS15A
SPOUT1
SMC2
KLHL11
HDAC10
FADS2
FADS1
LLGL2
SNAPC4
BAG2
UBTF
SNX14
TMEM223
TMEM179B
HAX1
ECI1
STYX
SLC50A1
DPM3
NME3
MT1M
MT1E
MRPS34
EME2
MAPKBP1
PIP5KL1
SP3
UPF3A
TUBB4B
YJU2
CD79A
TSC22D1
FDX2
IMPDH2
ORAI3
H3-3A
TTC8
TEDC2
C7orf26
RHOT2
PWP2
LOC102724159
ARF3
LAMP1
HPDL
H3-3B
INPP5K
WDR38
TYMP
SCO2
CELF1
MLLT6
GLRX2
ELK1
MATR3
WDR97
MAF1
DPH6
PRAF2
ARL6IP4
TTC33
MST1
FAM166A
GATD3B
GATD3A
FNBP1
ROPN1L
MLX
P2RY11
ULK3
OR6B2
NDUFA10
CDKN1C
ANTKMT
SRSF4
NAPRT
LMNB1
SNX9
RBM4
LRRC6
RILP
SRRT
CTNNAL1
RPL35A
USP21
BICRA
TOB2
GTF3C4
DDX31
MUC1
NDUFS3
MTA2
KBTBD4
THOC5
CCDC106
FAM104A
C17orf80
UQCC3
LBHD1
ZNF35
LARP1
RABGAP1
HMBS
DUSP2
ASTL
FAM89B
EHBP1L1
COASY
VPS4A
ARID5B
SLC39A1
CRTC2
GPS2
IGF1R
TTYH2
CCDC78
PABPN1
GAS2L1
ICA1L
RBKS
BABAM2
AGO3
RPN1
DENR
PIM2
ZBTB12
EHMT2
C2
KIF27
DYNLL1
ABCB6
ANAPC4
IRF2BP2
RAB40C
CSNK2B
BCAP29
ATXN2
TAOK2
TUBA1B
CITED4
TSC1
GFI1B
NFKBIA
RPS12
UBB
HOXA3
CENPA
URGCP
POLR2C
SAR1A
ZNF865
NME4
DECR2
PHOX2A
AP3M1
CNPY2
TRIM41
HSPA1B
TIGD5
RPL15
PATZ1
EEF1D
APOLD1
MEMO1
OPRL1
LKAAEAR1
URGCP-MRPS24
RPL7
RDH10
ABCF3
CALM2
GMEB2
ENAH
GAGE2A
HNRNPA1
CBX5
DENND4B
SLC12A6
SPEN
C16orf46
FSTL3
CDK12
ATF4
PPFIA4
RNF225
SLC35B2
LMLN
SRCAP
LOC730183
RHBDL1
SFN
ST3GAL3
WDR24
LRP6
ADNP
POM121C
ZBTB22
TAPBP
PACS1
ZNHIT2
H2BU1
H2AW
MYL6
HNRNPU
SAMD1
TMPPE
GLB1
CCDC97
SLC25A39
PROSER1
NHLRC3
PPP1R37
TXNIP
PCF11
PRMT3
LRRC37A3
GAGE2B
CASP6
SFT2D3
USP34
LENG9
GTF2IRD2B
GTF2IRD2
SLC25A42
CAMK2N2
TCTEX1D2
H2BC14
H2AC14
SEC14L1
ROGDI
H3C8
H2BC10
TLL2
CELSR3
NUDT4B
NUDT4
NOXO1
GFER
CENPVL3
ROMO1
MARCHF6
CRK
RECQL4
LRRC14
PPP3CB
TIGD3
CSNK1G1
CSRNP2
ZBTB37
CRELD1
PLPP5
RABGEF1
TUBGCP6
C19orf71
MLXIP
WDR27
C6orf120
SELENOO
C1QTNF8
GPX1
HYAL2
EIF4A1
ADAT1
NOL7
CS
ANKLE2
TRIM52
S100A6
MVB12A
GINS2
OTUD7B
LRP2BP
ANKRD37
PAF1
MED29
TXN2
TTLL3
TLCD2
CDK9
DCDC2
PHIP
NPDC1
ENTPD2
TARBP2
MAP3K12
ZNRD2
TBC1D13
MFSD3
PNRC1
ATXN7L2
LBR
DPY19L4
SF3B3
COG4
TARS3
EIF2D
PDE4DIP
RPL6
UFM1
TRIM45
NUDT17
PDF
NAXE
MTMR10
STMP1
MORC3
IFRD2
PURA
GPR137
FBXO31
FBXO4
MYOZ3
CEBPA
ZNF341
PPARA
ACTN4
ZNF398
CLN8
RPL35
CMTR1
RBM39
MAP1LC3B
DNAJC21
XPNPEP3
ST13
DNAJB7
MRPL49
IRF2BP1
FAU
RPLP2
NPRL3
MRPL12
SETD5
ETDB
NUDT16L1
APTX
RICTOR
KLF9
C8orf37
CCDC130
POLDIP3
CUL9
YY1
SOD2
LONP1
CATSPERD
SNX5
MGME1
ISL2
CEMP1
ZBTB2
GADD45A
FAM156B
FAM156A
HAGHL
DLG4
COMT
ACADVL
C7orf25
TP53BP2
MADD
CTNNB1
EGLN1
DGKZ
HYI
METTL8
DCAF17
C17orf75
SLC25A17
TRIM3
ZNF718
ZNF595
SRA1
NUMBL
IAH1
SFXN4
KLF12
CLK3
HNRNPF
ZCWPW1
MEPCE
OVCA2
PAXBP1
MIF4GD
DERA
NOL3
ANKRD12
RASA4B
YAP1
RUVBL1
ID2
GNE
THEM4
MORF4L1
TLE3
JPT2
ADARB1
TFAP4
VEGFB
DNAJC4
H1-10
BMI1
SETD6
CHD5
PIDD1
ZNF584
HMGA1
BORCS6
TXLNA
RNF166
CTU2
KLF6
IRX3
ALKBH5
BASP1
SRSF2
MFSD11
HYAL1
RRM2
ASXL1
GDI1
MRM1
SIGMAR1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
DNAJB4
NFAT5
ACTRT3
ADAMTS10
USP17L22
USP17L20
FIGN
DCAKD
TSFM
STRIP1
MCCD1
CCAR2
NDUFS7
ZNF703
POLB
PHF10
LUC7L2
GABARAP
ZNF76
ISY1-RAB43
ISY1
SMIM29
PRRC2B
CEP192
ANKRD54
ACVR2B
RFX1
DPH2
B4GALT2
ATP6V0B
UFSP1
MROH6
ACHE
CHAF1B
KIAA2026
TBR1
TUT1
NDUFB2
CYC1
TRAP1
SMG5
PMF1-BGLAP
PMF1
TXNRD2
CACFD1
RUFY2
DIDO1
FAM199X
DESI2
PCDH9
PRKDC
MCM4
PTPN6
B4GALT7
ANKH
FBXL3
ZMIZ2
TNS2
QSER1
RAB4A
KMT2D
ATAD2
ILF3
RAB23
KLC2
RAB1B
MTF2
RAB26
PKM
ZNF862
HOXA5
PHLDA2
TRPT1
NUDT22
TM2D3
COA6
TMEM79
FAM118A
SMIM13
POMT1
GBA
ARID3C
NOXA1
EEFSEC
SQSTM1
PCBP2
SMN2
SMN1
KMT2E
TMEM267