ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8538839 | NB-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◢ SRX3010238: A549

◢ SRX3010239: A549

◢ SRX3010253: GM12878

◢ SRX3010254: GM12878

◢ SRX10476598: Hep G2

◢ SRX10476599: Hep G2

◢ SRX116459: hESC H1

◢ SRX116460: hESC H1

◢ SRX186642: hESC H1

◢ SRX6783963: hESC H1

◢ SRX6783964: hESC H1

◢ SRX8053100: MM.1S

◣ SRX8538839: NB-4

◢ SRX23740430: SUM 149PT

◢ SRX23740431: SUM 149PT

◢ SRX23740438: SUM 149PT

◢ SRX23740439: SUM 149PT

◢ SRX23740455: SUM 149PT

◢ SRX23740458: SUM 149PT

◢ SRX23740461: SUM 149PT

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

NAGPA
IDH3B
RBM48
PEX1
METTL15
KIF18A
PDE6D
COPS7B
SFSWAP
ZNF830
CCT6B
WASHC2A
NGDN
CWF19L1
SPNS1
LAT
GATB
WASHC2C
STAT3
EIF2D
TMEM199
SEBOX
POLDIP2
SMG8
GET3
UBE3B
KCTD10
DNAJB12
STX18
ERAL1
TRIP4
PCLAF
METTL25
CCDC59
GPATCH3
GPN2
TSR3
GNPTG
PPWD1
CENPK
VPS50
HEPACAM2
NDUFS3
KBTBD4
FAM180B
ZC3HC1
SSNA1
ANAPC2
CRBN
OAZ3
HEXA
SUPT7L
SLC4A1AP
GTF3C5
NMNAT1
LZIC
ATG14
TMEM242
TRIAP1
COX6A1
RANBP6
KIAA2026
SAP30BP
RECQL5
C8orf33
MRPL21
IGHMBP2
TFPT
PRPF31
KCNJ14
GRWD1
THRA
MED6
RPS28
NDUFA7
SUMF1
TRMT61B
LAMP1
VPS33A
UBL5
FBXL12
RGS14
LMAN2
TACO1
EIF3F
PSMB7
ZNRD2
FAM89B
EHBP1L1
TPRN
TMEM203
NDOR1
XPO4
TRMO
ZCCHC4
TMEM41A
XAB2
STXBP2
PCP2
POLR2J3
WDR70
NUP155
NPM3
FGF8
ALKBH3
UQCC1
HNRNPA0
PEPD
KRR1
RRP15
RBM19
VIRMA
ERGIC2
ISY1-RAB43
ISY1
MTERF4
SUPV3L1
HAGH
FAHD1
CDC23
SMU1
TMEM128
RBM42
PUS10
PEX13
MRPL4
ZNF165
OR1F12
MRPS35
SEC13
VPS11
COMMD4
STX16
POLR3F
DZANK1
SPATA25
NEURL2
CTSA
ZSWIM1
TMEM101
EIF1AD
CST6
BANF1
MRPL39
TMX2
MED19
LRRC29
NOC4L
DDX51
DNAJC11
MRPS31
ATP5IF1
BRF2
MFN2
TOP3A
SMCR8
LIN52
ALDH6A1
ZFYVE26
RAD51B
PRSS22
DBNDD2
U2SURP
MRM3
GLOD4
CDKAL1
MAIP1
SMPD4
MZT2B
HNRNPA1L2
RTTN
DIABLO
NUFIP1
GPALPP1
ZNF721
PIGG
EMC4
MAMDC2
TIMM22
TDG
C12orf73
PHF5A
ACO2
USP30
TRMT1
NACC1
MED23
C5orf51
ZBTB45
SLC27A5
KLF1
GCDH
DNASE2
SETD3
CCNK
SYF2
DDX46
NSFL1C
YIPF2
TIMM29
ZMAT2
HARS2
HARS1
LSM5
AVL9
MRPS18C
HELQ
MRPL45
TEFM
PMPCA
ENTR1
RDH5
ITGA7
BLOC1S1
OSBPL9
NXT2
OPA1
IPO11
DIMT1
MRPS30
NUP214
TOMM22
NUP107
MTIF2
TMEM39A
POGLUT1
DNAJC30
BUD23
MED4
SNRPC
PRR5L
COMMD9
SLC24A1
METTL2B
NUP160
STOML2
PIGO
FAM214B
AURKAIP1
COPZ1
AARSD1
NFAT5
TAS1R1
NOL9
CWC25
MTBP
MRPL13
WDR53
FBXO45
SLC25A53
FAM199X
FAM149B1
ECD
TMEM262
DUS2
DPEP2NB
DDX28
C16orf89
ALG1
POLR1F
ING4
PPP1R11
POLR1H
ZFAND2A
MRPL44
SLC35B1
TSN
GTF3C3
C2orf66
MOCS3
DPM1
OS9
TEKT2
ADPRS
VCPKMT
POLR2J
MRPL48
PLEKHN1
NOC2L
KLHL17
EEF1E1
BRIX1
ZC3H18
MAGOH
QRICH1
AAR2
PUM3
PEX3
ADAT2
SENP1
PFKM
MDH1B
FASTKD2
FANCD2
TSR1
SGSM2
TARS2
GOLGA3
NDUFA12
TMEM126B
DLG2
FEM1A
BBS1
VAC14
NDUFV1
NDUFB3
FAM126B
KCTD5
TRAPPC2L
GALNS
ZNF789
ATP5MF-PTCD1
ATP5MF
NOXO1
TBL3
RPS2
RNF151
ZDHHC6
VTI1A
DNTTIP2
RAD52
TRMT44
ACOX3
KDM4D
CWC15
PPIL4
SPTLC1
ZSCAN22
RPL12
LRSAM1
MRPS22
SUGCT
MPLKIP
BSDC1
NMT1
DCAKD
DPP9
SCRN2
OSBPL7
LRRC46
SCAF11
NHP2
TSFM
C12orf43
NDUFS7
ZKSCAN4
NKAPL
SF3B2
GAL3ST3
TATDN3
NSL1
NDUFC2-KCTD14
NDUFC2
PLEKHM3
METTL2A
MRPS17
TIMM44
PHAX
ALDH7A1
FAM98B
TAF11
ANKS1A
TMEM230
PCNA
WDR74
STX5
RAD54L2
VARS2
GTF2H4
TSR2
NCAPH2
LMF2
ARMC1
MRPL16
MTMR2
RFXANK
BORCS8-MEF2B
BORCS8
PDCD6IP
PIGL
NCOR1
SF3A3
SREK1IP1
CWC27
GOSR1
FAM162A
CCDC58
RBX1
NUP54
CSTF2
COPS4
MRPL11
CPPED1
MRPS11
MRPL46
MYBL2
PEX19
NDUFAF2
ERCC8
PELP1
ARRB2
MNAT1
ATP7B
ALG11
MAPKAPK5
ALG10B
DMAP1
TM7SF3
MED21
ZDHHC16
EXOSC1
TXN2
MAGOHB
PCID2
CUL4A
TNPO3
NOM1
REXO4
ADAMTS13
ANAPC5
RNF166
CTU2
C1D
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
HTRA2
DQX1
SART3
ISCU
NDUFB8
HIF1AN
DHX40
MRTO4
EMC1
MTRF1
CCDC43
COPS8
POLR2J2
NDUFA9
AKAP3
TCTN2
MRPL3
GTF2H3
EIF2B1
DDX23
CDK5RAP1
TOMM6
PRICKLE4
FRS3
ABT1
MTX1
THBS3
WDR11
UBIAD1
SSBP1
APTX
COX10
NDUFB6
RTN4IP1
QRSL1
SMN2
SMN1
AP5Z1
MRPS14
NOL11
ZNF185
TTC31
CCDC142
DBT
GHITM
MTOR
MTG1
PAOX
POMZP3
KLHL12
RPS6KB2
PTPRCAP
RPTOR
TBC1D23
MRPS15
LARS2
PRPF38A
ORC1
URM1
DOK3
DDX41
TYW1
SBDS
MRPL55
STMN3
RTEL1
POC1B-GALNT4
POC1B
GALNT4
ZNF263
SRPRA
CLPB
SMG7
AP1G1
THUMPD1
TUBGCP3
SLC39A4
CPSF1
MKS1
MYL5
ATP5ME
ZNF17
NOL8
CENPP
PACSIN3
ARFGAP2
ZZZ3
FBXO28
CDK11B
CDK11A
RAD51AP1
C12orf4
STARD10
EIF3H
WDR48
SCN11A
RBM28
WDR24
STUB1
JMJD8
UMPS
RIN1
BRMS1
B4GAT1
PSME3
BECN1
NOP9
DHRS1
SNX1
CIAO2A
ERICH4
DMAC2
CCNT1
HSD17B10
AQR
XPC
LSM3
RPS7
TYW1B
EIF3E
ZSCAN25
OR6B2
NDUFA10
PSMC3
PALB2
DCTN5
RPLP0
GCN1
ZGRF1
LARP7
ZNF777
SLIRP
ALKBH1
ZNF408
ARHGAP1
MTRNR2L2
MSH3
DHFR
WASHC5
NSMCE2
UBA5
ACAD11
FCF1
AREL1
SF3B3
COG4
ECSIT
CNN1
CCAR2
C8orf58
MRPL37
CYB5RL
LATS1
IQCC
DCDC2B
CCDC28B
MZT2A
GMPPB
AMIGO3
TOP3B
ZNF514
ZNF2
BABAM1
TRIM23
TRAPPC13
SHLD3
P2RY11
EIF3G
NDUFB5
MRPL47
ASB6
UBE2A
CXorf56
MRPL1
FAM104B
TMA7
CCDC51
ATRIP
CENPW
GABARAP
ELP5
CTDNEP1
PPAN-P2RY11
PPAN
ANGPTL6
SKP2
LMBRD2
PPT1
ASH2L
NUP42
SAMD10
PRPF6
LONP1
CATSPERD
RPUSD2
CCDC32
HINT3
NUF2
KLHDC4
RBBP5
COMMD2
GRN
MED28
SDHB
PFDN1
DCP1A
ZNF207
C17orf75
TIMM21
FBXO15
TBRG4
RPL6
PTPN11
TBCC
BICRAL
MPHOSPH10
MCEE
MRPL30
MITD1
ZNF791
ZNF490
DDX19A
MAP3K7
COMMD1
SDHC
MPZ
ALG10
GTF2H2
ZFPL1
CDCA5
PEX14
DFFA
HEMK1
C3orf18
MRPS7
MIF4GD
GGA3
FAM32A
NDUFAB1
GALK2
COPS2
RNF10
COQ5
DUX4
WNK4
VPS25
SEC16A
C9orf163
ZNF3
COPS6
EXOSC8
ALG5
TBC1D15
RTF2
MTRNR2L1
PRR3
GNL1
HDAC6
MED1
PLK4
TPRKB
ZSCAN30
MAN2C1
GSTO2
GFM2
ING5
DUS4L-BCAP29
DUS4L
COG5
MTRNR2L8
UNKL
C16orf91
NR1H3
ACP2
MUL1
PPIE
RBM8A
PEX11B
PEF1
FAM207A
FZR1
DOHH
ZNF23
NME1
LYRM4
FARS2
TFIP11
TCERG1
DUS1L
SLC39A2
METTL17
UBN1
GLYR1
DHDDS
OTUB1
NOP53
ZNF296
GEMIN7
GTF2H2C_2
GTF2H2C
YJU2
ZACN
SRP68
GALR2
AARS2
YY1
RUVBL1
EEFSEC
TIMM23B
PARG
TTC26
BORCS7
CSPP1
COPS5
PSMC2
DNAJC2
DCAF10
IPPK
ZMPSTE24
TMCO2
SH3YL1
ACP1
MRPL58
TTC4
SEPTIN4
MTMR4
RFC1
YBEY
MCM3AP
FAM204A
HBS1L
LMTK2
WDR83OS
WDR83
MAN2B1
TUFM
SH2B1
PIH1D2
NKAPD1
NFYB
SAR1B
ZSWIM8
CHCHD1
FUT11
TIMM17A
LMOD1
CFAP410
USP54
SPSB3
NUBP2
MRPS34
EME2
NME3
SELENOH
NFX1
TBCCD1
DNAJB11
GMEB2
ZSCAN21
MALSU1
TRIM52
MED9
TOX4
RAB2B
RPL35
ARPC5L
WDR38
FAM187A
EFTUD2
CCDC103
UTP20
MRPS18A
LAS1L
RPUSD4
FAM118B
CCDC106
ZNF581
ZNF580
FBXL18
MIS18A
COA6
RNASEH2C
KAT5
GPAM
SRSF11
LRRC40
CMTR1
NCAPD2
MRPL51
SSU72
ZNF585B
ZNF383
UBN2
RPS5
PIK3R4
FBXO22
OXNAD1
DPH3
UQCC3
UBXN1
LBHD1
ATG9B
ABCB8
PSD
FBXL15
ARHGEF7
STK36
RNF25
SF3B5
ZNF213
EDC3
ZNF561
RANBP3
ANAPC11
ALYREF
ZNF292
NOL10
CWF19L2
PWP1
C10orf88
MRPL53
MOGS
ZNHIT2
MRPL49
FAU
THAP4
ATG4B
NAPA
EXOSC3
NOP16
HIGD2A
NDUFS6
MRPL36
NKAP
RMDN3
GCHFR
GBA
KIF5C
GSTT2B
DDTL
DDT
GSTT2
RABL3
GTF2E1
TIGD6
HMGXB3
RNF26
C1QTNF5
PINX1
MRPL2
KLC4
CUL7
LTO1
MRPL27
EME1
AASDH
JRK
DDX49
COPE
SART1
OSCAR
NDUFA3
TMEM183A
YIPF3
POLR1C
LRRC73
QDPR
CLRN2
DNAJA3
CORO7-PAM16
CORO7
AAAS
SPAG1
POLR2K
FBXO43
POLR2D
CACTIN
IQCH
AAGAB
UHMK1
TIMM50
RBSN
LANCL2
EEF1AKMT3
METTL1
CYP27B1
ZNF778
PISD
HMGCL
PSMB2
HAX1
CLPTM1L
GLRX3
SMIM19
SLC20A2
NDUFB10
ZNF358
MCOLN1
PIN1
RAVER1
ICAM3
METTL6
EAF1
RER1
MORN1
MRPL35
IMMT
MIS12
DERL2
TRAIP
ATP6V0C
AMDHD2
PDHA1
ARFGEF2
RGS20
ATP6V1H
MST1
SPDL1
TMCO6
NDUFA2
IK
SDR39U1
PRPSAP2
PTPRN2
CD33
METAP1D
MFSD5
ZNF596
KAT8
BCKDK
GPATCH1
BBS10
FAM161B
COQ6
VTA1
NMBR
MRPS10
MED27
BNIP1
DCTN4
INTS12
GSTCD
ATG16L1
MIA3
ZNF839
TMEM217
TBC1D22B
MOK
UMAD1
AP2S1
ARHGAP35
GNG14
FBXW9
WDR36
METTL14
TMEM237
MYSM1
USP20
C9orf78
POLR3B
KNTC1
UBAP2
UBE2V2
ARL8B
NBEAL2
CCDC12
HECTD3
ZNF181
PCNP
NCBP2AS2
NCBP2
ELOA
LDAH
USP8