ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6783963 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◢ SRX3010238: A549

◢ SRX3010239: A549

◢ SRX3010253: GM12878

◢ SRX3010254: GM12878

◢ SRX10476598: Hep G2

◢ SRX10476599: Hep G2

◢ SRX116459: hESC H1

◢ SRX116460: hESC H1

◢ SRX186642: hESC H1

◣ SRX6783963: hESC H1

◢ SRX6783964: hESC H1

◢ SRX8053100: MM.1S

◢ SRX8538839: NB-4

◢ SRX23740430: SUM 149PT

◢ SRX23740431: SUM 149PT

◢ SRX23740438: SUM 149PT

◢ SRX23740439: SUM 149PT

◢ SRX23740455: SUM 149PT

◢ SRX23740458: SUM 149PT

◢ SRX23740461: SUM 149PT

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

KIF5C
MTRNR2L9
MTRNR2L1
RGPD2
RGPD1
EMILIN2
METTL15
KIF18A
MTRNR2L10
PTPRN2
MAMDC2
METTL25
CCDC59
IDH3B
C1orf198
SUMF1
MTRNR2L2
MSH3
DHFR
ATG14
RBM19
NGDN
NAGPA
VPS50
HEPACAM2
MTRNR2L8
TRMT1
NACC1
SPNS1
LAT
HAGH
FAHD1
U2SURP
MRM3
GLOD4
ZNF830
CCT6B
TMEM242
UBE3B
KCTD10
FAM204A
MRPS18C
HELQ
ISY1-RAB43
ISY1
PPWD1
CENPK
MRPL39
GATB
RBM48
PEX1
GPATCH3
GPN2
CDC23
PRR5L
COMMD9
SMG8
ZFYVE26
RAD51B
ERAL1
PDE6D
COPS7B
RGS14
LMAN2
TSR3
GNPTG
ZC3HC1
MRPL1
PHF5A
ACO2
ZNF165
OR1F12
EIF2D
C8orf33
RTTN
NGB
MTRNR2L6
PLEKHN1
NOC2L
KLHL17
GTF3C5
SCML1
MED6
SSNA1
ANAPC2
NDUFAF2
ERCC8
THRA
ACSL3
KRR1
GET3
PPT1
SFSWAP
TMEM41A
TOMM22
TCTN2
BSDC1
RANBP6
KIAA2026
TIMM22
POLR3F
DZANK1
TMEM39A
POGLUT1
POLR1F
PSMB7
SUPT7L
SLC4A1AP
TFPT
PRPF31
SREK1IP1
CWC27
TMEM199
SEBOX
POLDIP2
PEPD
TRAPPC2L
GALNS
MRPL44
XAB2
STXBP2
PCP2
NDUFS3
KBTBD4
FAM180B
TRIP4
PCLAF
WDR18
ZNRD2
FAM89B
EHBP1L1
INTU
BRIX1
NCAPH2
LMF2
UNKL
C16orf91
TOMM6
PRICKLE4
FRS3
CSPP1
COPS5
NDUFS7
MRPS15
VIRMA
C16orf89
ALG1
FEM1A
NUP214
UBL5
FBXL12
WASHC2A
DNTTIP2
PUS10
PEX13
MRPL45
WASHC2C
LIN52
ALDH6A1
MRPS14
RNF26
C1QTNF5
MRPL55
MTIF2
UQCC1
MAIP1
RBM42
RPTOR
EIF3H
TAF3
EIF1AD
CST6
BANF1
SAP30BP
RECQL5
PELP1
ARRB2
DBNDD2
RRP15
CWF19L1
COX10
URM1
CRBN
TMEM101
TMEM126B
DLG2
DBT
NOL8
CENPP
MDH1B
FASTKD2
PDCD6IP
MTERF4
TEKT2
ADPRS
PFDN1
LARS2
TSR1
SGSM2
FAM162A
CCDC58
UBIAD1
HBS1L
MRPS22
TIMM17A
LMOD1
YIPF2
TIMM29
TXN2
MUC3A
IPO11
DIMT1
ZMAT2
HARS2
HARS1
LRRC29
BBS1
RTN4IP1
QRSL1
PMPCA
ENTR1
TRIAP1
COX6A1
DNAJC30
BUD23
MTBP
MRPL13
METAP1D
NSFL1C
NPM3
FGF8
VPS11
TPRN
TMEM203
NDOR1
SETD3
CCNK
ZNF207
C17orf75
NAXE
GPATCH4
RTF1
BABAM1
APBB2
PSMC3
LONP1
CATSPERD
METTL16
TRIM48
RPUSD4
FAM118B
BRF2
EIF3F
WDR74
STX5
LOC102724770
DGCR6
HEXA
RCE1
ATP5IF1
SF3B2
GAL3ST3
TOP3A
SMCR8
PEX19
MFN2
C5orf51
SLC25A26
DNAJC11
C12orf43
NMT1
DCAKD
VCPKMT
CSTF2
COMMD4
NUP54
NUP160
CEP20
MRTO4
EMC1
NMNAT1
LZIC
SLC39A4
CPSF1
DDX23
PIGL
NCOR1
SPATA25
NEURL2
CTSA
NOL11
SF3B3
COG4
MKS1
MYL5
ATP5ME
OAZ3
KAT8
BCKDK
TMEM216
TMEM262
MRPL58
MRPL21
IGHMBP2
TRMO
QRICH1
DUX4
ZNF789
ATP5MF-PTCD1
ATP5MF
RDH5
ITGA7
BLOC1S1
PISD
MOCS3
DPM1
MRPS11
MRPL46
ZNF213
VPS33A
RBX1
COX16
RPS28
NDUFA7
TACO1
MRPS31
ZBTB45
SLC27A5
HNRNPA1L2
COL23A1
SPRYD4
UHMK1
ATXN2L
UTP20
THUMPD1
MRPL2
KLC4
CUL7
TAS1R1
NOL9
TRMT61B
SENP1
PFKM
OXNAD1
DPH3
MNAT1
DPP9
USP30
TNPO3
SUPV3L1
KCTD5
RABL3
GTF2E1
ALKBH3
MRPL48
ZSCAN22
ZNF17
SUGCT
MPLKIP
DIABLO
MZT2A
VAC14
ABT1
TEFM
PPP1R7
PASK
ATP7B
ALG11
TAF10
TPP1
SPATA20
CACNA1G
TIMM21
FBXO15
ZFAND2A
TAF2
PACSIN3
ARFGAP2
ERICH4
DMAC2
OS9
OSCAR
NDUFA3
RNF6
HMGCL
HSPBP1
BRSK1
SLC25A53
FAM199X
KDM4D
CWC15
FBXO28
NCAPD2
MRPL51
TARS2
ERGIC2
COPS8
MED23
OPA1
SEC16A
C9orf163
ANKRD13C
KCNJ14
GRWD1
SLC35A3
MRPS10
TJAP1
WDR48
SCN11A
DNAJB12
CDK5RAP1
USP54
SMPD4
MZT2B
WDR53
FBXO45
LYRM4
FARS2
WNK4
VPS25
FZR1
DOHH
XPO4
MTO1
CGAS
USP8
UBN1
GLYR1
LIN7C
TATDN3
NSL1
TMX2
MED19
RANBP3
TRMT44
ACOX3
TM9SF4
AP5Z1
MPHOSPH10
MCEE
EIF3E
PHB2
AURKAIP1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
HAX1
APTX
ZDHHC6
VTI1A
PIGK
PPP1R11
POLR1H
NOC4L
DDX51
TAF11
ANKS1A
STX18
PCID2
CUL4A
SLC35B1
ZZZ3
TAX1BP3
EMC6
KLF1
GCDH
DNASE2
SLC7A6OS
PRMT7
CCDC43
ZMPSTE24
TMCO2
LAMP1
NDUFB5
MRPL47
STX16
KLHDC4
WDR24
STUB1
JMJD8
ZNF770
SYF2
CDKAL1
ZGLP1
FDX2
TBRG4
WDR36
CCAR2
C8orf58
DUS2
DPEP2NB
DDX28
LSM5
AVL9
MFSD5
DHX35
RPS7
ZNF514
ZNF2
TSN
SART3
ISCU
TMEM217
TBC1D22B
UBXN11
RNASEK
C17orf49
EMC4
SNRPC
IQCH
AAGAB
RFXANK
BORCS8-MEF2B
BORCS8
WDR70
NUP155
DUS4L-BCAP29
DUS4L
COG5
EEF1E1
ZCCHC4
FAM187A
EFTUD2
CCDC103
XPC
LSM3
CNOT3
ARMC8
TIMM44
DDX46
ZKSCAN4
NKAPL
SPAG1
POLR2K
FBXO43
CACTIN
DHX40
YIPF3
POLR1C
LRRC73
OR6B2
NDUFA10
ACIN1
SERPINA5
NDUFA9
AKAP3
TRDMT1
ZC3H18
ARFGEF2
TMEM126A
RPUSD2
CCDC32
GOLGA3
UMPS
STOML2
PIGO
FAM214B
UQCRC1
NDUFV1
GTF3C3
C2orf66
LRRC8A
KYAT1
MAGOH
WDR83OS
WDR83
MAN2B1
PUM3
EXOSC3
NSUN4
TBC1D22A
PTPN21
TSR2
FANCD2
MRPL11
CCDC97
ZNF358
MCOLN1
SRPRA
YBEY
MCM3AP
GOSR1
SF3A3
TOP3B
UBE2A
CXorf56
SKIDA1
ZNF585B
ZNF383
MRPS7
MIF4GD
GGA3
ANKFY1
DLST
WDR11
TBC1D23
SDE2
EEF1AKMT2
ABRAXAS2
SEPTIN4
MTMR4
PTCD3
POLR1A
SYNGAP1
CUTA
MRPL35
IMMT
PIN1
SPSB3
NUBP2
MRPS34
EME2
NME3
IPPK
TUFM
SH2B1
TRUB1
NUF2
NDUFAB1
ZDHHC16
EXOSC1
DNAJA3
CORO7-PAM16
CORO7
TERF2IP
KARS1
MIA3
METTL2B
ZBTB8OS
RBBP4
SH3YL1
ACP1
HIRIP3
FOLR3
GABARAP
ELP5
CTDNEP1
MED4
RAE1
MTRNR2L3
MRPL20
CCNL2
UBN2
TM2D1
PTCD2
MRPS27
PHAX
ALDH7A1
CWC25
ZSCAN30
GSTT2B
DDTL
DDT
GSTT2
ZNF497
A1BG
USP42
CMTR1
PEX3
ADAT2
NOP16
HIGD2A
TMEM11
TBC1D19
ALKBH8
PIGS
ALDOC
ASH2L
ZNF561
GTF2H3
EIF2B1
MAGOHB
OTUB1
PNKP
AKT1S1
TBC1D17
WASHC5
NSMCE2
EXOSC9
NCSTN
COPA
PPP1R15B
MYSM1
EIF4G2
SLIRP
ALKBH1
RNF166
CTU2
PEX14
DFFA
ANAPC11
ALYREF
ZWINT
AP1G1
GTPBP10
ZNF461
SSBP1
MRPL53
STMN3
RTEL1
GPX8
EEF1AKMT3
VAMP3
MRPS18A
METTL1
CYP27B1
MOGS
WWP2
NOB1
L3MBTL2
SDHC
MPZ
FAM32A
RUVBL2
GYS1
ZNF614
COMMD2
TMEM128
GFM2
ITGB3BP
EFCAB7
ZNF205
PNPT1
MAP3K7
MRPL4
PRPF38A
ORC1
TDG
C12orf73
RUVBL1
EEFSEC
SELENOH
AP3S1
ITGB1BP1
CPSF3
MED9
ZNF721
PIGG
TYW1B
ART1
SNRPD3
GUCD1
VPS41
NUP107
VPS52
RPS18
B3GALT4
SMU1
FAM104B
GBA
TSSK4
MDP1
CHMP4A
FRA10AC1
MAGEB10
AMY2A
TTC31
CCDC142
MRPS35
TEPSIN
NDUFAF8
CEP162
TMEM230
PCNA
ATAD3B
POLR2J2
SEC13
ATP6V1C1
MRPS23
NHP2
PGGT1B
TM7SF3
MED21
ZNF408
ARHGAP1
NUFIP1
GPALPP1
TMED9
B4GALT7
DGUOK
SEC11A
MTOR
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
STK36
RNF25
NXT2
FAM149B1
ECD
SRRD
HPS4
ZCCHC10
GPN1
CCDC121
YY1
NFKBIL1
DDX39B
ATP6V1G2
MTX1
THBS3
SMG7
PSMB2
SF3B5
MRPS17
DCP1A
PHRF1
CLDN7
GRPEL2
NDUFB8
HIF1AN
REXO4
ADAMTS13
NDUFC2-KCTD14
NDUFC2
SPDL1
SPTLC1
OSBPL9
ZKSCAN8
NBAS
PWP1
SPC25
UQCRB
WDR4
KLHL7
VARS2
GTF2H4
ZNHIT2
MRPL49
FAU
ATXN7L1
MAPKAPK5
RPLP0
GCN1
GPATCH1
MFSD1
NOL10
ANAPC5
MRPL3
TTC26
PPP1R10
MRPS18B
ATAT1
SUPT4H1
TMA7
CCDC51
ATRIP
GADD45GIP1
SDHAF2
CPSF7
UBE2L3
SSU72
PAF1
MED29
MED18
CSTF2T
ZNF622
SCAF11
AGBL4
PSME3
BECN1
IMMP1L
ELP4
NOXO1
TBL3
RPS2
RNF151
NDUFAF5
ESF1
RPP30
ZBTB11
RPL24
ATP6V1G1
THOC1
BNIP1
DDX49
COPE
TBC1D15
ZNF79
UPP1
FAF2
EIF4B
PCNP
ZNF195
UBE2L6
ZSCAN9
NOLC1
MED25
FUZ
MRPL37
CYB5RL
ZNF507
RMDN3
GCHFR
GID4
ATPAF2
ANAPC1
NDUFA5
THAP10
LRRC49
SLC25A1
PDXK
SASH1
ARMCX5-GPRASP2
GPRASP2
BHLHB9
THBS4
MTX3
MYNN
ACTRT3
SNX1
CIAO2A
FKBPL
ATF6B
MALSU1
TBCK
AIMP1
DDX19A
PSMC4
MTRF1
PHF23
DVL2
MRPL52
MMP14
TP53I3
SF3B6
FAM228B
LCMT1
AHCY
AQR
NR1H3
ACP2
WDR20
HSP90AA1
METRN
HAGHL
CCDC78
ANTKMT
KANSL2
WBP1
INO80B
RPAIN
NUP88
NELFA
PFAS
CTC1
YJU2
JRK
DHDDS
RNF10
COQ5
MRPL27
EME1
CHM
RAB3GAP1
TFIP11
NOXA1
TMEM183A
NME1
TMEM237
DNAJC25-GNG10
DNAJC25
SERP1
EIF2A
TSFM
TBC1D30
GNS
OTUD6B
ZNF292
FCF1
AREL1
ALG10
ZNF501
ZNF426
GSC2
C6orf89
NOL12
PPIL1
SRSF11
LRRC40
CCDC106
ZNF581
ZNF580
RAD54L2
POLR2J
MED27
SENP5
TYW1
SBDS
METTL2A
DNAJC13
COQ3
NAXD
ILF3
RNASEH1
GRN
AASDH
TIMM50