ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX186642 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◢ SRX3010238: A549

◢ SRX3010239: A549

◢ SRX3010253: GM12878

◢ SRX3010254: GM12878

◢ SRX10476598: Hep G2

◢ SRX10476599: Hep G2

◢ SRX116459: hESC H1

◢ SRX116460: hESC H1

◣ SRX186642: hESC H1

◢ SRX6783963: hESC H1

◢ SRX6783964: hESC H1

◢ SRX8053100: MM.1S

◢ SRX8538839: NB-4

◢ SRX23740430: SUM 149PT

◢ SRX23740431: SUM 149PT

◢ SRX23740438: SUM 149PT

◢ SRX23740439: SUM 149PT

◢ SRX23740455: SUM 149PT

◢ SRX23740458: SUM 149PT

◢ SRX23740461: SUM 149PT

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

KIF5C
MTRNR2L9
MTRNR2L1
RGPD2
RGPD1
MTRNR2L10
MAMDC2
EMILIN2
METTL15
KIF18A
PTPRN2
IDH3B
MTRNR2L2
MSH3
DHFR
METTL25
CCDC59
MTRNR2L8
NAGPA
RBM19
SUMF1
TRMT1
NACC1
NGDN
MRM3
GLOD4
ATG14
ZNF830
CCT6B
HAGH
FAHD1
TMEM242
U2SURP
FAM204A
GATB
ISY1-RAB43
ISY1
MTRNR2L6
CDC23
VPS50
HEPACAM2
MRPL39
GPATCH3
MRPS18C
HELQ
TSR3
GNPTG
PPWD1
CENPK
ZFYVE26
RAD51B
UBE3B
KCTD10
SMG8
PDE6D
COPS7B
RBM48
PEX1
ZNF165
OR1F12
GTF3C5
MRPL1
SPNS1
LAT
EIF2D
C8orf33
RGS14
LMAN2
SFSWAP
RTTN
PRR5L
COMMD9
KRR1
WASHC2A
GET3
RANBP6
KIAA2026
ZC3HC1
NDUFAF2
ERCC8
ERAL1
PHF5A
ACO2
THRA
TMEM199
SEBOX
POLDIP2
SSNA1
ANAPC2
MED6
TMEM41A
POLR3F
DZANK1
TMEM39A
POGLUT1
WDR18
COL23A1
MUC3A
MRPL44
SREK1IP1
CWC27
PLEKHN1
NOC2L
KLHL17
BRIX1
PSMB7
SUPT7L
SLC4A1AP
NCAPH2
LMF2
TCTN2
TRIP4
PCLAF
INTU
TRAPPC2L
GALNS
NDUFS3
KBTBD4
FAM180B
PUS10
PEX13
TFPT
PRPF31
TOMM22
PPT1
XAB2
STXBP2
PCP2
C16orf89
ALG1
EIF3H
DNTTIP2
BSDC1
TIMM22
MAIP1
POLR1F
UNKL
C16orf91
NDUFS7
TOMM6
PRICKLE4
FRS3
VIRMA
MRPS15
ZNRD2
FAM89B
EHBP1L1
PEPD
RNF26
C1QTNF5
MTERF4
FEM1A
CWF19L1
LARS2
MTIF2
CSPP1
COPS5
SAP30BP
RECQL5
UBL5
FBXL12
URM1
PDCD6IP
TRIM48
FAM162A
CCDC58
RBM42
MRPS14
UQCC1
NUP214
BABAM1
LOC102724770
DGCR6
MRPL45
NOL8
CENPP
RRP15
DUX4
EIF1AD
CST6
BANF1
RPTOR
MRPL55
LRRC29
SETD3
CCNK
MDH1B
FASTKD2
PEX19
EIF3F
TMEM101
CRBN
TEKT2
ADPRS
BBS1
TAF3
TSR1
SGSM2
ZMAT2
HARS2
HARS1
HBS1L
LIN52
ALDH6A1
TMEM126B
DLG2
DBT
TPRN
TMEM203
NDOR1
NPM3
FGF8
MTBP
MRPL13
PFDN1
PMPCA
ENTR1
WASHC2C
SERPINA5
HEXA
UBIAD1
DNAJC30
BUD23
NSFL1C
NMNAT1
LZIC
NUP160
TIMM17A
LMOD1
TRIAP1
COX6A1
BRF2
MKS1
NAXE
GPATCH4
VPS11
SF3B3
COG4
SF3B2
GAL3ST3
RTN4IP1
QRSL1
MRPS11
MRPL46
RCE1
SLC39A4
CPSF1
TXN2
COX10
MYL5
ATP5ME
YIPF2
TIMM29
MRPS22
SENP1
PFKM
IPO11
DIMT1
MOCS3
DPM1
DDX23
MRPL21
IGHMBP2
HNRNPA1L2
TRMO
SPRYD4
CEP20
NOL11
MRTO4
EMC1
C5orf51
COX16
ZNF789
ATP5MF-PTCD1
ATP5MF
PSMC3
NMT1
DCAKD
COMMD4
MRPL2
KLC4
CUL7
ZNF213
METTL16
DBNDD2
PISD
MRPS31
METAP1D
C12orf43
TACO1
QRICH1
TAS1R1
NOL9
PIGL
NCOR1
UTP20
TRMT61B
NUP54
ATP5IF1
KAT8
BCKDK
RBX1
SPATA25
NEURL2
CTSA
KCTD5
TMEM262
SUGCT
MPLKIP
ZNF207
C17orf75
ZFAND2A
RABL3
GTF2E1
TOP3A
SMCR8
PELP1
ARRB2
MFN2
LONP1
CATSPERD
VPS33A
TEFM
ZNF17
ZSCAN22
PACSIN3
ARFGAP2
WDR74
STX5
RDH5
ITGA7
BLOC1S1
NCAPD2
MRPL51
UHMK1
OXNAD1
DPH3
RPUSD4
FAM118B
HSPBP1
BRSK1
THUMPD1
MRPL58
VCPKMT
KCNJ14
GRWD1
ATP7B
ALG11
OAZ3
SLC25A53
FAM199X
ZBTB45
SLC27A5
OS9
CDK5RAP1
TATDN3
NSL1
OSCAR
NDUFA3
OR2T1
MZT2A
OPA1
TAF2
XPO4
STX18
TAF10
TPP1
DNAJC11
MRPL48
FBXO28
LIN7C
ERICH4
DMAC2
WNK4
VPS25
TARS2
SPATA20
CACNA1G
PPP1R11
POLR1H
MNAT1
LAMP1
ABT1
TNPO3
VAC14
PPP1R7
PASK
RNF6
KDM4D
CWC15
TJAP1
DNAJB12
WDR24
STUB1
JMJD8
SLC25A26
ANKRD13C
WDR48
SCN11A
ERGIC2
TMX2
MED19
EIF3E
RNASEK
C17orf49
ZZZ3
USP54
AURKAIP1
MPHOSPH10
MCEE
ALKBH3
SLC7A6OS
PRMT7
COPS8
TIMM21
FBXO15
SLC35A3
TSN
SPAG1
POLR2K
FBXO43
CNOT3
SYF2
MED23
DIABLO
MRPS10
TM9SF4
DUS2
DPEP2NB
DDX28
HMGCL
USP30
PMF1-BGLAP
PMF1
ZDHHC6
VTI1A
NOC4L
DDX51
ZNF770
STX16
TRMT44
ACOX3
CSTF2
FZR1
DOHH
XPC
LSM3
SEC16A
C9orf163
ZMPSTE24
TMCO2
TBRG4
SUPV3L1
PHB2
WDR53
FBXO45
ZNF514
ZNF2
RPS28
NDUFA7
TAF11
ANKS1A
ARMC8
HAX1
DDX46
ZKSCAN4
NKAPL
NDUFB5
MRPL47
USP8
PHRF1
WDR83OS
WDR83
MAN2B1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ALKBH8
SLC35B1
KLF1
GCDH
DNASE2
WDR36
NDUFV1
ZGLP1
FDX2
SYNGAP1
CUTA
SMPD4
MZT2B
EXOSC3
OR6B2
NDUFA10
FAM187A
EFTUD2
CCDC103
SNRPC
SART3
ISCU
EEF1E1
CCDC43
LSM5
AVL9
RFXANK
BORCS8-MEF2B
BORCS8
SRPRA
TUFM
SH2B1
YBEY
MCM3AP
APTX
KLHDC4
FANCD2
CCAR2
C8orf58
ZC3H18
CDKAL1
ZCCHC4
RPUSD2
CCDC32
MTO1
CGAS
NUF2
DHX35
TRUB1
STOML2
PIGO
FAM214B
PTPN21
TAX1BP3
EMC6
LRRC8A
KYAT1
NDUFA9
AKAP3
WDR70
NUP155
RAE1
MTRNR2L3
GTF3C3
C2orf66
MRPS17
PUM3
RANBP3
UQCRC1
SEPTIN4
MTMR4
METTL2A
PIN1
FRG2
ZNF358
MCOLN1
DPP9
MAP3K7
ZSCAN30
RPS7
PNKP
AKT1S1
TYW1B
TBC1D17
AGBL4
TDG
C12orf73
GTF2H3
EIF2B1
ZBTB8OS
RBBP4
TBC1D22A
ZDHHC16
EXOSC1
CCDC97
ZKSCAN8
PIGK
TMEM11
EMC4
FRG2C
UBXN11
PEX3
ADAT2
ZNF205
NDUFAB1
NFKBIL1
DDX39B
ATP6V1G2
SLIRP
ALKBH1
UBN1
GLYR1
ZNF461
ARFGEF2
MRPL35
IMMT
ACIN1
MED4
TSR2
COMMD2
SF3A3
SELENOH
PHAX
ALDH7A1
AP5Z1
SDHC
MPZ
TERF2IP
KARS1
GOLGA3
WDR11
UBE2A
CXorf56
GBA
PWP1
NSUN4
ART1
MED27
NCSTN
COPA
MAPKAPK5
MED9
L3MBTL2
MRPL11
ZNF408
ARHGAP1
AP1G1
ZNF585B
ZNF383
STMN3
RTEL1
PTCD2
MRPS27
GOSR1
SH3YL1
ACP1
TRDMT1
DLST
ZBTB11
IQCH
AAGAB
RPL24
AP3S1
MTX1
THBS3
CWC25
ASH2L
MRPS7
MIF4GD
GGA3
RPLP0
GCN1
NXT2
TMEM126A
FAM32A
UMPS
SMG7
ZNF561
POLR2J2
GPX8
TOP3B
UQCRB
SPTLC1
TTC31
CCDC142
MRPL53
MOGS
TMEM230
PCNA
PCID2
CUL4A
DCP1A
ATAD3B
GPATCH1
SPC25
MRPL20
CCNL2
YIPF3
POLR1C
LRRC73
SSBP1
FAH
GABARAP
ELP5
CTDNEP1
PTCD3
POLR1A
NOP16
HIGD2A
HIRIP3
MED18
TEPSIN
NDUFAF8
MRPL4
PSMB2
GFM2
GSTT2B
DDTL
DDT
WDR4
MED25
FUZ
NUP107
PRPF38A
ORC1
DUS4L-BCAP29
DUS4L
COG5
NBAS
YY1
MTOR
SDE2
SEC13
OSBPL9
EEF1AKMT3
TMEM128
METTL1
CYP27B1
ITGB3BP
EFCAB7
TBC1D19
VPS52
RPS18
B3GALT4
MRPS18A
REXO4
ADAMTS13
IMMP1L
ELP4
VARS2
GTF2H4
TP53I3
SF3B6
FAM228B
FAM104B
MRPL3
LYRM4
FARS2
TMEM217
TBC1D22B
MFSD5
FAM149B1
ECD
CEP162
TMEM183A
SMU1
ANAPC5
SPSB3
NUBP2
MRPS34
EME2
NME3
ALG10
SCAF11
TBC1D23
MAGOHB
ATP6V1C1
GPN2
PSME3
BECN1
EEF1AKMT2
ABRAXAS2
SLC33A1
POMZP3
ITGB1BP1
CPSF3
SEC11A
FRA10AC1
WASHC5
NSMCE2
DHX40
MIA3
ANAPC1
TIMM44
ZNF79
GRPEL2
CSTF2T
ANKFY1
PEX14
DFFA
WWP2
NOB1
SNRPD3
GUCD1
RAB3GAP1
ZNF195
MRPS35
EXOSC9
GPN1
CCDC121
PSMC4
FAF2
RUVBL1
EEFSEC
PCNP
RNF166
CTU2
DNAJA3
CORO7-PAM16
CORO7
MRPS23
SRRD
HPS4
GTPBP10
ATXN7L1
NUFIP1
GPALPP1
ZNHIT2
MRPL49
FAU
ZNF721
PIGG
SPDL1
ANAPC11
ALYREF
SF3B5
NDUFA5
TM2D1
TSSK4
ZNF497
A1BG
MDP1
CHMP4A
PDXK
SUPT4H1
NOL10
SSU72
NR1H3
ACP2
PHF23
DVL2
CMTR1
PNPT1
MFSD1
VAMP3
ZCCHC10
METTL14
CLDN7
INTS9
HMBOX1
MAGOH
CHM
DDX19A
MTRF1
AQR
RPAIN
NUP88
NELFA
TTC26
ARMCX5-GPRASP2
GPRASP2
BHLHB9
SPAAR
HRCT1
NDUFB8
HIF1AN
FCF1
AREL1
TBCC
BICRAL
NOLC1
DRD4
MYSM1
PRR3
GNL1
SDHAF2
CPSF7
WBP1
INO80B
SAP18
VPS41
RAD54L2
IPPK
CACTIN
NOL12
NDUFC2-KCTD14
NDUFC2
EIF4B
SDR39U1
GID4
ATPAF2
CCDC106
ZNF581
ZNF580
ZNF614
ATP6V1G1
NDUFAF5
ESF1
DHDDS
NUDT5
CDC123
UBE2L3
METTL2B
RPL9
LIAS
OTUD6B
DNAJC25-GNG10
DNAJC25
OSGEPL1
OTUB1
MYNN
ACTRT3
C6orf89
DNAJC13
ZWINT
PPIL1
RBBP5
PPIL3
NIF3L1
ZNF501
NOXO1
MRPL37
CYB5RL
TBL3
RPS2
RNF151
STK36
RNF25
MED28
FKBPL
ATF6B
KLHL7
NME1
NDUFS4
TFIP11
RBM23
NFX1
OSGIN1
RMDN3
GCHFR
PRRT2
MAZ
RBM28
THAP10
LRRC49
TMEM237
EIF4G2
TOR1AIP2
TOR1AIP1
ZNF839
MOK
ARMC1
THOC1
DDX49
COPE
CLPTM1
APOC2
PRKRIP1
NOXA1
PPP1R10
MRPS18B
ATAT1
ILF3
RSL24D1
RNASEH1
YJU2
JRK
NDUFB3
FAM126B
BORCS7
ZNF292
TMED9
B4GALT7
SDHB
DOLPP1
TBC1D30
GNS
GPAM
LCMT1
TMA16
UTP15
ANKRA2
RPP30
TFB2M
CNST
PAF1
MED29
MRPL30
MITD1
UBE2L6
TM7SF3
MED21
TSFM
SEC24C
BMS1
DGUOK
TBCK
AIMP1
COQ3
CCDC57
FAM227B
DTWD1
ZNF426
GSC2
TMA7
CCDC51
ATRIP
DDX47
ZNF594
TBC1D15
NKAP
THBS4
MTX3