ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026268 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◣ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX11453883: GP5d

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ DRX431474: Hep 3B

◢ SRX10829250: Hep 3B

◢ SRX10829251: Hep 3B

◢ SRX10829252: Hep 3B

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX10475577: Hep G2

◢ SRX10475578: Hep G2

◢ SRX10829253: Hep G2

◢ SRX10829254: Hep G2

◢ SRX10829255: Hep G2

◢ SRX150698: Hep G2

◢ SRX8089917: hESC derived hepatic progenitor

◢ SRX8089918: hESC derived hepatic progenitor

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX11650959: hESC derived pancreatic cells

◢ SRX11650960: hESC derived pancreatic cells

◢ SRX11650961: hESC derived pancreatic cells

◢ SRX11650962: hESC derived pancreatic cells

◢ SRX11650963: hESC derived pancreatic cells

◢ SRX11650964: hESC derived pancreatic cells

◢ SRX11650965: hESC derived pancreatic cells

◢ SRX11650966: hESC derived pancreatic cells

◢ SRX702028: hESC HUES64

◢ DRX431466: JHH-7

◢ SRX2636008: Liver

◢ SRX2636009: Liver

◢ SRX2636083: Liver

◢ SRX2636084: Liver

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

PHF12
SLC7A7
CSTF1
AURKA
PLEKHG6
MIA2
PDXP
MVP
SELENOP
PRAP1
PKP4
VIL1
HNF1A
KRTAP5-7
SLCO2B1
PANK1
SCAF11
POLD4
RPS7
C11orf24
ACY3
CYP17A1
LBX2
CLPB
RNPEP
ZNF567
PCYT2
APOC3
GPR35
CACNB2
SCNM1
LYSMD1
CCDC90B
MMADHC
RAB37
TCIRG1
DENND2B
NUDT13
STARD4
SHISA5
ADAP1
UNK
ANKRD40CL
F10
CDK5RAP1
NR1I3
SLC45A4
HIKESHI
AP2S1
F7
AQP11
ABLIM1
NEK2
KIF21A
TMEM115
PEPD
ZNF225
CIDEC
LGALS2
IL32
RBKS
BABAM2
SMAGP
MMACHC
CCDC163
TMPRSS4
DIP2C-AS1
TATDN3
NSL1
ACOX2
TMEM208
LRRC29
NOSTRIN
CREB3L3
ACOT7
CDC14B
ACSS2
SDHAF1
TMBIM1
FCHO2
NR0B2
FDX1
MYADM
SOS1
BTNL8
PABPN1
HAAO
EPS8L3
WDR36
BANP
CTU1
ZNF529
CWC25
KLC4
MRPL2
EMP1
HNMT
IDH1
PHB
TFPT
PRPF31
MEP1A
APOB
PINK1
HGD
TCEA2
GNG4
TECR
DNAJB1
ATXN7L1
ACY1
FASTKD1
AHSG
TSNAXIP1
RANBP10
RAB17
BRCA1
SLC22A23
ANK3
NEURL2
CTSA
NDUFS3
KBTBD4
GSDMB
AJUBA
BCL9L
SEC16B
SLC19A3
PEX11G
ALPI
DNAJC22
ST3GAL6
WNK4
VAMP5
H4C3
TRAF4
NDUFA6
SMG8
DYNC1I2
ZNF165
C19orf53
UMPS
METTL7B
TMEM140
STX16
WDR46
PFDN6
AHCY
CYB5R3
DHRS11
RSPRY1
MRPL44
WNK1
AKR1C4
JMJD1C
SOCS5
SEH1L
BLCAP
SSTR1
KNL1
IFNGR1
IFRD2
MAP3K11
ORC2
GUCY2C
MCRIP1
OTULIN
HEPACAM
APOBEC1
MBNL2
ZNF223
CCDC146
BOD1
INVS
ERP44
SH3BGRL2
SLC22A9
CLDN4
ECI1
MRPL24
KBTBD6
ANKS4B
ZFYVE27
MRPL20
PLXNB2
CCR1
HSD17B11
ZNF230
MYO1A
ZNF226
MED15
BOLA1
TDP2
ACOT13
DHRS3
AMACR
MUC13
EIF3F
OPA3
ZNF140
NR1D1
PPRC1
DDX23
COX7C
STK31
INHBE
BORCS7
SMG5
TACO1
ZNF112
SUCLA2
PAAF1
COA4
ZNF512B
TRIP4
RDH5
IST1
AXL
DNASE1
DECR2
AGMAT
DOK4
TMTC3
CEP290
TBCCD1
TMEM254
ZNF155
COX16
XYLB
MOGAT3
SH3D19
DSTYK
TTC31
CCDC142
FAM149B1
ECD
DFFA
BMS1
PUS10
PEX13
EDEM2
CHMP4B
AHCYL2
SPRY4
SEC23A
RBBP5
TNS3
ESRRA
MGST2
PPIP5K2
GIN1
SLC28A1
TNFRSF10B
WHAMM
IFTAP
ARHGDIB
TMEM181
SLC51B
SNX17
EIF2B4
AIFM2
MTIF2
GPR137
TM9SF4
VTN
TOMM22
MTMR4
AP1AR
RPL34
MLF2
TMEM139
TFEC
CD99
GFM1
FAM168A
TM4SF5
DDC
POLDIP3
RAB32
CCDC107
PRKCSH
CCDC151
CLIC1
NDUFC2-KCTD14
NDUFC2
SLC39A5
SIAE
NUP107
JAML
SMPD3
IFIT3
GOLGA6L2
TNFAIP1
IFT20
IGSF23
TMEM101
TRIM14
COPS4
SMLR1
AAR2
SNAP47
JMJD4
CDIP1
TMEM92
CLRN3
FBXL19
RPGRIP1L
FTO
ZBTB45
NR1H2
CRTC2
WDR24
BLOC1S5
DMXL1
PRCC
ZSCAN22
PCK1
GSTO1
PAFAH2
CYP4F3
RPS6KB2
POM121
NUF2
ZFYVE1
MAF
ALG10
WASHC2A
TMEM177
SMYD5
ABCC2
GLG1
CNOT2
CISD1
MRPL21
IGHMBP2
IQANK1
FAM83H
SSBP1
PPP1R12C
SOAT2
CTSB
BIRC2
EHBP1
USP48
LSM14A
AATK
C1orf210
CCDC93
CBLC
RALGPS1
ZNF17
TK1
GDF15
SLC22A18
GNAL
SNRPB2
PDZK1
NODAL
ATXN2
ZNF205
AGT
ZNF235
ZNF232
HBP1
MFRP
C1QTNF5
ALG10B
MMP15
C4BPB
TUT1
RTEL1
PERP
N4BP2
TBC1D23
FRA10AC1
INTS9
HMBOX1
UNC5B
SPATA2
STK24
SELENOI
ADGRF3
SKIV2L
NELFE
SDHD
ZNF384
ZNF219
DNMT3A
NPRL2
CYB561D2
BMF
INTS4
RBM33
DUSP15
ELOC
KMT5A
MRPS16
CRK
FYB2
PPP1R12B
IQSEC3
SUPV3L1
ZNF419
ABCC6
PLA2G12B
SURF4
NPAS4
DUSP18
ALAS1
CRNKL1
CFAP61
NUFIP1
GPALPP1
FEM1A
ZNF461
MIA3
QPRT
ZNF564
PHF14
LRSAM1
RPL12
GAB1
PALM2AKAP2
GALM
B4GALT4
SAR1B
TRIM40
SLC30A4
ZFP91
LPXN
HPS5
GTF2H1
SLC17A5
DUS2
DDX28
TOR1AIP1
CHKA
ZNF320
CSTF2T
NID1
TAOK3
PRR5
BPHL
TCOF1
ZSWIM3
ACOT8
HADHB
HADHA
HNF4A
TMEM256
ZNF487
UPB1
HSP90B1
PPIL2
C11orf49
NDUFA2
IK
IDH3B
VIPAS39
AHSA1
SCP2
MYO7B
SYMPK
FOXA3
KAT7
MAPKAPK5
HRCT1
SLC10A5
CRBN
VPS25
BUB1B
ZNF444
COMT
CPHXL
CYP27A1
TOMM40
ZNF628
CES1
ZNF26
MRPL40
HIRA
NOP16
HIGD2A
PRRG2
NOSIP
GID8
DIDO1
ENGASE
HSD17B14
ZNF354A
LARS1
RPS3A
LIN37
MRPL48
TJP3
ZNF354B
ZNF211
AMN
CLNS1A
RHOBTB2
DEAF1
SEC22B
KDM4D
CWC15
LIF
RFPL2
NR5A2
SOX30
C5orf52
PDZD3
WDPCP
MDH1
TMEM71
PHF20L1
ZNF343
AKAP1
EIF1AD
BANF1
ZNF749
GSDMD
TOMM70
LNP1
MLEC
HSPH1
GSK3A
RAB1A
SPHK2
RPL18
S100A16
HDHD3
LEKR1
PARD3B
KRR1
SORT1
BAIAP2L2
H4C8
NEDD8-MDP1
NEDD8
GMPR2
FSTL3
VPS50
HEPACAM2
TIMM23
SDCBP2
SLC25A16
SLC23A3
METRNL
APOA2
SEPSECS
ANKRD26
ATXN7
NME1-NME2
NME1
EIF2S2
SARDH
FUT2
RAB11FIP3
USP30
IMP3
COPS7A
MED24
DENND5B
MIEF1
METTL8
DCAF17
BCL7B
CCNL1
MRPS31
RNF121
LOC100133315
ANXA9
NRBF2
TEFM
EMSY
TREH
CD86
CRYGC
WASHC2C
KRTAP5-4
MARK2
FAAP20
RAB30
DPPA4
MS4A10
TMEM230
UBA6
CCR6
PRR13
ZNF221
SRC
TRIM15
PTK2B
ZC3HC1
CCDC77
KDM5A
ACTR1A
SUFU
IRF5
RBM42
CDHR5
TWF2
MRPL16
ZNF668
ZNF646
GEMIN6
ZNF224
TBL3
HSPE1-MOB4
HSPE1
HSPD1
ALDH3B1
TMEM86B
CNKSR3
TMEM144
RPIA
KBTBD7
MAN2C1
NSUN5
GATB
ALKBH7
OSCAR
NDUFA3
PSMB6
PI3
RABAC1
GMPPA
PHB2
COASY
PEMT
CALML4
VPS28
TLDC2
GPR132
ARNT
ZNF57
BOD1L1
DNM1L
NDUFS1
EEF1B2
ATP11C
SELENOH
MARS1
ARHGAP9
SSNA1
ANAPC2
CAND1
INO80B
GRWD1
CSRP1
WIPF1
SPATS2L
MICOS13
HSD11B1L
LRIG2
ATP5MC3
DCDC1
CUBN
STAT3
SULT1C2
NCKAP5
TSSC4
ST3GAL2
ZC3H10
DUS3L
MYL12B
GFER
INTS12
GSTCD
GDI2
KATNB1
ZNF181
VCPIP1
C8orf44-SGK3
C11orf86
COMMD3-BMI1
COMMD3
RARS1
NUDCD1
SLC35A3
NOC4L
DDX51
MGAT1
UBA5
APOM
KCNK10
SCAND1
MTMR9
RPLP2
LMTK3
PYROXD1
TTI1
RPRD1B
SSUH2
RNASEH2C
MAP1LC3B2
OPA1
C12orf43
STYXL1
ZNF605
JRK
OAS1
MT1F
RBP2
NDUFAF1
RAP1GAP
ADGRG7
AQP10
HSD17B4
TPR
ODR4
TMEM150A
PWP1
TTC12
CCDC174
SYNJ2BP-COX16
SYNJ2BP
ZNF214
NLRP14
IQCN
TANK
SNRPA
NR1H3
ACP2
MITD1
ZNF420
ISY1-RAB43
ISY1
PNPO
PJA2
POLK
CERT1
EIF3D
C15orf39
AP2B1
SOD2
KRT8
A1CF
UBQLN4
LAMTOR2
PALM3
NR2F2
H4C12
ABCF2
PACSIN2
DNAJC11
NUP153
IPO4
BTRC
RBSN
NAT10
RPL6
PHF7
BAP1
TMEM199
POLDIP2
ADD3
WFDC3
DNTTIP1
AGPAT3
PRDM10
SHANK2
TXNDC9
EIF5B
SHROOM1
PRRG4
C17orf75
ZNF485
CCL15
FAM228B
DCAF6
SF3B6
CTNNBL1
STAU1
SLC25A45
MRPS34
EME2
KMT2D
EDN3
DLC1
ACAP3
TMEM184A
ZNF37A
HINT2
SENP1
PFKM
CHCHD2
KMT5B
LOC100129484
SLC2A8
PLEC
ABCC9
MAP4K5
ATL1
TRUB1
HOXA3
ZC3H12D
NOL7
HTRA2
GSTK1
DHRS12
RPS13
PARG
LYZL6
TRMT2A
RANBP1
PGPEP1
ARSF
DPM3
RBM6
TOMM7
OBI1
ZFYVE19
DNAJC17
CIAO2A
ZNF764
U2SURP
SUPT7L
SLC4A1AP
CALR3
C19orf44
HMGCS1
GDPGP1
CIB1
CRADD
ZNF2
F2
UTP14C
SEMA4G
ZNF56
TRAK1
NIPAL1
CNGA1
HNF1B
GTF2H4
TOP3B
GTF2H3
EIF2B1
PKLR
SLC34A3
PATZ1
ZNF234
ZNF805
RAVER1
NSA2
GFM2
CAMSAP3
TP53I3
TOGARAM1
KLHL28
ACSL5
ZNF23
SP2
ACP6
RPL29
ZMAT2
C16orf91
APBB1
MRPL3
ZKSCAN4
SNX7
MNAT1
SLC41A2
KLHL20
CALCOCO1
ING4
MRPL53
GAB2
MAPK6
EXD2
TIMM13
SLC4A2
CDK5
CDK12
TMCO1
CST5
LRRC59
RPS6KA1
SLC30A1
SRSF4
ID1
ARPIN-AP3S2
ARPIN
MYL3
PAK4
RCAN1
POLR2H
TYSND1
NDUFAF5
ESF1
PLEKHG1
USP54
SLC35B4
CWF19L2
GUCA2A
ASAH1
CIAO3
WDR87
SIPA1L3
CYP2S1
MPND
TSC2
NTHL1
TMEM245
LTBP3
TOB2
TBC1D19
ZNF417
ATP5F1D
MST1
GRTP1
SCO2
GALK2
COPS2
CFB
CPPED1
SLC31A1
FKBP15
PNKD
AAMP
NQO2
AP3S2
SOWAHD
ZSCAN25
THAP11
FGFR4
AIG1
GRM4
FRMPD1
WDR11
UTP3
JPH2
MRPL12
HNRNPA1L2
PSMD11
PSMA5
NOS2
DYRK2
CWC22
HK1
RPS28
NDUFA7
SNAPC2
GGNBP2
DUS4L-BCAP29
DUS4L
COG5
NRL
DCAF11
UBR4
TMEM242
BET1
ZNF337
RPTOR
ZNF879
UFD1
CDC45
CXCL2
NCEH1
AMOTL2
POLR3F
DZANK1
ATG101
TRIM31
UBE4A
HEPH
ALG14
KCTD5
FITM2
PPP2R5B
RPS26
M6PR
KLRG1
ZNF233
NFE2L2
ATP5MF-PTCD1
ATP5MF
MRPS22
MRPL19
ZNF827
NUCB1
ZCCHC8
SMARCAL1
DCLRE1C
TAF11
NDUFA9
AKAP3
ZNF473
VRK3
ASGR2
PTGR2
SLC7A9
DLAT
NUP54
NTAN1
ZW10
ZNF721
PIGG
CEP43
C11orf52
BRPF3