ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748420 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX11453883: GP5d

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◣ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ DRX431474: Hep 3B

◢ SRX10829250: Hep 3B

◢ SRX10829251: Hep 3B

◢ SRX10829252: Hep 3B

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX10475577: Hep G2

◢ SRX10475578: Hep G2

◢ SRX10829253: Hep G2

◢ SRX10829254: Hep G2

◢ SRX10829255: Hep G2

◢ SRX150698: Hep G2

◢ SRX8089917: hESC derived hepatic progenitor

◢ SRX8089918: hESC derived hepatic progenitor

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX11650959: hESC derived pancreatic cells

◢ SRX11650960: hESC derived pancreatic cells

◢ SRX11650961: hESC derived pancreatic cells

◢ SRX11650962: hESC derived pancreatic cells

◢ SRX11650963: hESC derived pancreatic cells

◢ SRX11650964: hESC derived pancreatic cells

◢ SRX11650965: hESC derived pancreatic cells

◢ SRX11650966: hESC derived pancreatic cells

◢ SRX702028: hESC HUES64

◢ DRX431466: JHH-7

◢ SRX2636008: Liver

◢ SRX2636009: Liver

◢ SRX2636083: Liver

◢ SRX2636084: Liver

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

MTRNR2L8
MTRNR2L2
NDUFS1
EEF1B2
RGPD2
RGPD1
NEK2
PHF12
PRR3
GNL1
MIA2
SKIV2L
NELFE
ATXN7L1
CCDC90B
SH3D21
SFRP5
MTRNR2L9
RPS3A
CCDC107
SCARB1
CSTF1
AURKA
CDC14B
KNL1
WDR36
DKK4
MMACHC
CCDC163
SF3A3
ABLIM1
LBX2
RPL34
SELENOP
PPIP5K2
GIN1
ZSWIM3
ACOT8
TNFRSF10B
C19orf12
NQO2
SMARCD2
MRPS28
NR1I3
RAB17
ROCK2
IST1
RBBP5
SAXO1
RRAGA
ACY1
MVP
CD2BP2
GAB1
CLCF1
CEP128
ULK4
SP2
ARPIN-AP3S2
ARPIN
KRTAP5-7
UBE2R2
COPS4
KDM3A
TNPO3
MMADHC
NUP107
SH3D19
SEC23A
RFX2
TJP3
FAM228B
SF3B6
RBKS
BABAM2
CSNK1A1
YJU2
INTS4
RFFL
MAP1LC3C
MAN2C1
SELENOI
ADGRF3
CLASP1
METTL7B
GOLGA4
VPS54
PGLYRP2
ARNT
TTC31
GUCA2A
ZC3H12D
PRDM10
MAP4K5
ATL1
PRXL2A
EIF1AD
BANF1
TINAGL1
PDXP
S100A16
ZNF827
PRKCI
RABGGTB
NUDCD1
EIF4A2
PRKCSH
CCDC151
TDP2
ACOT13
PEX11G
ALG10B
BAAT
ALDH3A2
BORCS7
CYP17A1
CCNI
LSG1
SMAGP
RPS7
U2SURP
YAP1
PSMA5
PJA2
POLDIP3
POLR1H
P3H4
FKBP10
RPL7
RDH10
SHTN1
STK40
LSM5
SLC1A3
RAB30
RNF121
LOC100133315
SCNM1
LYSMD1
RPS26
HEXIM1
TIMM9
KIAA0586
KLC4
MRPL2
CPHXL
PTS
RAB34
TTI2
C1orf174
PPP1R9B
LAPTM4A
VGLL4
DHX36
ACSL5
MLLT10
TMCO1
MLF2
PIM3
HAAO
PKP4
HNF1A
IQANK1
FAM83H
VIL1
AGMAT
ABCC6
NEURL2
CTSA
ZNF567
ZNF232
KIF21A
TATDN3
NSL1
SCAF11
PCYT2
MAP3K11
SMG5
AQP11
APOB
PINK1
F10
DENND2B
RAB37
SHISA5
ORC2
PABPN1
SLCO2B1
NRL
DCAF11
GSDMD
AHCY
F7
SRSF11
LRRC40
HADHB
HADHA
AHSG
CDKN2AIP
AP1AR
ACY3
ACOX2
SLC7A7
GAMT
PLEKHG6
VAMP5
C9orf64
ENTPD8
FYB2
MGST2
NID1
SUCLA2
ZNF219
CREB3L3
DEAF1
NR0B2
DENND5B
UBR4
C1GALT1
DOK4
ZNF214
NLRP14
IGSF23
PLXNB2
RAP1GAP
PANK1
ASGR2
SLC2A14
CBS
XYLB
SLC45A4
LARP1
ANKS4B
NDUFA6
PDE11A
ALKBH7
CFB
ATXN7
AJUBA
SLC19A3
FCHO2
ISOC1
PPIL2
PUS10
PEX13
GDI2
TRIM14
RAB32
MMP15
ABCD3
CDIP1
FASTKD1
TCIRG1
TMEM177
CHST13
C3
RIN3
DNAJC22
MCRIP1
ANXA9
IL32
EPS8L3
HSPE1-MOB4
HSPE1
HSPD1
MGAT1
IFNGR1
SDCBP2
CA5A
NEU4
ZNF184
PERP
HMGCS1
ATP7B
ALG11
GNG4
PEPD
IL11RA
HNMT
TM4SF5
ETFA
TRIM15
CPPED1
CYB5R3
IQGAP2
SLC35D1
SEPTIN9
DHRS3
AGT
SARDH
UGDH
SMLR1
APOA1
SLC28A1
MRPL20
MAF
STARD7
PAAF1
COA4
STAT5B
PALM2AKAP2
IL7
GIPC2
MOV10L1
PDLIM2
ZNF764
GPT
MPND
TMBIM1
FNIP1
DONSON
MST1
OCIAD2
AKAP1
TFR2
LCAT
ERF
VEGFA
LOC100129484
PROZ
CRK
H4C3
NGEF
UBA6
TMEM254
TK1
SLC36A1
TRAF4
HGD
CBY3
POLD4
INHBE
PRAP1
AMACR
DNMT3A
RBIS
NR1D1
UHRF1BP1L
SNTG1
EPHX2
LINS1
ASB7
C11orf24
QPRT
IDH1
FGFR4
SEC16B
HSD17B11
PKLR
PHACTR4
EPS8L2
ANK3
SPPL2A
MYADM
CLDN19
CCDC142
PTPA
CRAT
PAK4
F12
BLOC1S5
ZNF512B
TAOK3
ASPDH
ADGRG7
GRTP1
ABAT
N4BP2L1
SH3BGRL2
INTS9
HMBOX1
TRMT2A
RANBP1
MSH5
VTA1
NMBR
SOD2
SLC22A3
SOS1
SERPINF1
HRCT1
GPR35
PGPEP1
MYL12B
APOC3
TNFAIP8L1
NIPSNAP1
KRT8
TMEM139
TACO1
ADD3
RCAN1
TMEM17
CAMSAP3
PPP1R27
RMND5A
ASL
UCKL1
GALK1
VANGL1
GLTPD2
MIA3
APOC2
ZNF564
POLR2H
ZNF444
GCHFR
CYP8B1
WDR90
SF3B2
TNS3
ZFAND2B
ZBTB4
POLR2A
TMEM71
PHF20L1
OPA3
TJAP1
MIEF1
MFN2
RBP5
UBA5
ZFYVE27
DAO
DOK7
PLA2G12B
RASSF5
MTMR4
ZBED4
CAMK1
CCDC71
C18orf21
CYB5A
UMPS
DIP2C-AS1
NUP210
RBMS1
GFM1
POMGNT1
BLCAP
LEAP2
ACOT2
RWDD3
TMEM150A
UGGT2
ASGR1
ASAH1
TRAPPC10
C4BPB
AIFM2
FTCDNL1
BRIP1
SECTM1
CALML4
PELO
ITGA1
F2
GDF15
TPRN
TUBG1
RETREG3
PDZK1
PLXNB1
BCL9L
SLC39A5
DRG2
E2F5
OTULIN
CACNB2
NSUN5
CSRNP1
BIRC2
CRPPA
DLC1
ATXN1
AMT
TECR
DNAJB1
MAF1
ACO1
SPATA2
POLRMT
ITPK1
GFER
CTDSP1
PYROXD1
C1orf210
SLC26A1
RDH5
STK24
IQCN
CAMKK2
TREH
C4B
C4B_2
METTL8
DCAF17
ZNF747
MTFR2
PROS1
ATP11A
SHF
ATXN2
SLC22A7
GPR108
TBCCD1
AMN
WFDC3
DNTTIP1
SENP1
PFKM
PDGFB
SERPINA1
MRPL40
HIRA
VTN
SH3BP2
NUDT16
MOGAT3
AJM1
HPR
CMPK1
SMYD5
RFPL2
GPHA2
NFATC3
TP53I3
SSTR1
ACACB
NIPAL1
CNGA1
CYP4F3
TECPR1
SLC30A1
FUT10
MARK2
SCP2
CRYBG1
KIFC3
WNK4
EHHADH
VPS28
TANK
PALM3
SDC1
SURF4
NFE2L2
PHF14
CLYBL
DLX2
CCR6
BMF
SRSF4
ZHX3
ADAP1
DDC
EIF4EBP3
TTI1
RPRD1B
RFX7
SLC31A1
AK3
C3orf86
ANKRD40CL
CREBRF
FKBP15
TOGARAM1
KLHL28
PIPOX
TIMMDC1
FBLN1
RASA4B
CHD1
C1orf115
SHPK
CTNS
DGKD
TXLNA
NDRG2
CLIC1
SERPINC1
FUT5
C2orf88
GALM
GSTM4
NCOA2
SDHAF1
GSTK1
EPHX1
TF
RCL1
SOAT2
CD86
C8A
CCDC93
TMEM140
C2
ARHGEF16
CBWD5
NUFIP1
GPALPP1
CYP7A1
RAD50
LOC110384692
C4A
SUN2
FAAP20
TTC38
KMT5A
ZSWIM8
PRODH2
KIAA0754
POM121
MTARC1
RPS15
SLC35D2
TPT1
ZNF548
BDH1
NADK2
MASP2
MAP2K3
VARS2
FBXO33
ADGRA1
ZNF223
MBNL1
PRR5
CES1
PUS3
AP4S1
LIME1
BPHL
MBNL2
PGAP3
ERBB2
FAM47E-STBD1
FAM47E
HRG
G6PC
CMTM8
TCAF1
CCL16
AASS
KIF16B
DCLRE1C
ANKRD26
MTIF2
ZBTB7C
CCDC42
FDX1
THNSL1
SMIM11B
SMIM11A
B4GALT4
RNF149
FAM161B
COQ6
ZNF687
JMJD1C
PRR13
DECR2
MRPS30
SHPRH
PKIG
CCDC68
TCOF1
SLC35A3
PCGF5
RNPEP
MDM2
CBWD3
SMIM12
ADH4
LAMTOR5
TACC2
APOA2
CX3CL1
ARMC5
IGF2BP2
PLIN1
SLC5A9
BRCA1
TUBG2
ZNF565
ZNF146
GANAB
APOM
ATP10D
PTK2B
IRF5
MYO1E
UTP14C
CCDC146
SLC22A18
HOXA3
AQP3
ID1
ACAT2
ATP1B1
HPD
RNF19A
TMEM19
NCOA4
SPATS2L
SHFL
GLT8D1
CIDEC
CEP43
KCNAB2
BPIFB2
AKTIP
RSPH14
LSM2
MAGI1
CYP27A1
SLC2A8
RASA4
TIA1
CLDN23
ORM1
C11orf52
GALE
SMIM6
FAHD2A
AGMO
NTMT1
KPNA7
SEMA4B
GUCA2B
STARD5
NINJ1
RBM42
FBXW5
C8G
PNPO
SYNCRIP
ST3GAL6
LURAP1L
PIKFYVE
ESRRA
SEMA4G
GPD1
IL1RN
GOLPH3
CES2
ZNF468
RBP4
YEATS4
A1BG
TMEM86B
HYAL2
REP15
LSM14A
RNF31
PSME2
MAP3K7CL
AGFG2
RHBDD1
SLC39A6
CRLS1
FHIT
NFATC2
AIG1
GPR137
SEC14L5
PCK1
GDPGP1
CIB1
ARL5A
SLC10A5
MRPS24
FADS6
TOP1MT
IL13RA1
PTGR2
PKP2
HP
RNF220
CYB5B
ABCC2
SYN3
CBWD6
SCO2
FGD4
NAP1L4
IFFO1
TWF2
PEF1
CEP152
DDX19B
IRS1
LZTS3
CD99
MOK
USP42
AXL
ANPEP
RBM33
SNRPA
TEX9
SOCS5
STX16
LOC112577592
MAOB
SCARA5
TMEM256
NRBF2
USP37
CNOT9
CLRN3
GRB7
CYP4F11
SLC27A5
TMEM82
TMEM218
RALGPS2
AGPAT1
ASB9
PARP4
ABCD4
BTBD19
SLC40A1
ECI1
EFNA2
GREB1
HPN
CPN2
HERC5
IMP3
POT1
UFL1
HPS5
GTF2H1
CYCS
SLC7A9
INSR
CDC34
SHH
COQ5
MED31
C17orf100
SORT1
DNAJC15
ATAT1
UCK1
NR2F6
GYS2
TSPYL5
TYMSOS
TYMS
SCAF4
MGMT
ABCB4
CLDN14
PYGL
SLC34A3
ZBTB8OS
RBBP4
P2RX7
HBP1
HINT2
IGSF9
SNX7
NAGA
FAM185A
LRIG2
RNF5
CRYGC
ATP6V0E2
AMPD2
ALDH5A1
ARSB
LIN54
FLVCR2
BRPF3
HUS1
GNAT2
ASXL1
GFOD1
ZNF600
DYRK1B
CFAP299
CCDC43
CFAP20
RTL10
GNB1L
LPIN3
CYP4A11
SUOX
OSBP2
TMEM202
GMPPA
TMEM14A
TMTC3
CEP290
GAB2
SASH1
AKR1C4
FABP1
DNPEP
GNAL
DECR1
ENPP7
MIIP
SRSF5
PLEC
HAL
SLC25A1
ADGRA3
SWI5
GOLGA2
FAT4
LTV1
TBP
PSMB1
ACSM2A
LDHA
LDLRAD4
HMGCL
CNOT2
CYP21A2
SERPINB9
STN1
KYNU
MME
ZNF230
LAD1
C19orf54
ACOT7
PARP16
RFC5
UPB1
SERPIND1
EFNA1
PWP1
TMEM181
DIXDC1
SLC25A34
ACOT1
LRP1
TTC12
COMT
SLC51B
LGALS4
LIMS2
STX18
BCAR3
ACSM2B
SHC1
CKS1B
CRNKL1
CFAP61
HEATR5A
TMPRSS6
OGDHL
BSDC1
TMEM87A
GANC
PPP1R3D
FAM217B
PTPN18
CCNH
NR1H3
DENND1B
SLC2A4RG
ELK4
FBXL12
NOTCH2NLC
ABCF2
SUSD2
ECSIT
PRRG4
PHF7
BAP1
SHBG
DVL3
SERPINA10
IFNL4
ISCA1
PPP1R21
ORM2
NAT2
ZNF28
TUBB4B
HSPA2
CLUH
TCIM
NAT1
AGTRAP
NGRN
WDFY3
GDF10
SGK3
POLR3A
TEF
GCKR
MYG1
HJV
SLC19A2