ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748434 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX11453883: GP5d

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◣ SRX748434: HCT 116

◢ DRX431474: Hep 3B

◢ SRX10829250: Hep 3B

◢ SRX10829251: Hep 3B

◢ SRX10829252: Hep 3B

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX10475577: Hep G2

◢ SRX10475578: Hep G2

◢ SRX10829253: Hep G2

◢ SRX10829254: Hep G2

◢ SRX10829255: Hep G2

◢ SRX150698: Hep G2

◢ SRX8089917: hESC derived hepatic progenitor

◢ SRX8089918: hESC derived hepatic progenitor

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX11650959: hESC derived pancreatic cells

◢ SRX11650960: hESC derived pancreatic cells

◢ SRX11650961: hESC derived pancreatic cells

◢ SRX11650962: hESC derived pancreatic cells

◢ SRX11650963: hESC derived pancreatic cells

◢ SRX11650964: hESC derived pancreatic cells

◢ SRX11650965: hESC derived pancreatic cells

◢ SRX11650966: hESC derived pancreatic cells

◢ SRX702028: hESC HUES64

◢ DRX431466: JHH-7

◢ SRX2636008: Liver

◢ SRX2636009: Liver

◢ SRX2636083: Liver

◢ SRX2636084: Liver

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

MIA2
MTRNR2L8
SKIV2L
NELFE
CCDC107
PHF12
NEK2
DEAF1
NR1I3
ATXN7L1
CLCF1
NDUFS1
EEF1B2
C11orf86
CSTF1
AURKA
MAP3K11
CYP17A1
HRCT1
MTRNR2L2
SLC41A2
FCHO2
SFRP5
AP1AR
CREB3L3
S100A16
KPNA7
SCARB1
RAB17
TDP2
ACOT13
GNAL
INTS4
CCDC90B
ACY1
ROCK2
SYT12
POLD4
CDC14B
C19orf12
PEX11G
ZNF764
TJP3
USP37
CNOT9
RBKS
BABAM2
DHRS3
TNFRSF10B
ABLIM1
PIM3
TINAGL1
BAAT
SLC38A10
SHTN1
UBE2R2
ZC3H12D
SH3D21
GUCA2A
ARNT
KMT5A
PPP1R12B
RAD50
CD86
IST1
SECTM1
SH3D19
RPS3A
MAP4K5
ATL1
GAB1
MPND
ALDH2
GOLGA4
ZNF696
PRMT2
KRTAP5-7
RASSF5
NGRN
KNL1
CEP152
TOGARAM1
KLHL28
SLC39A6
ERCC6L
ZNF219
MTMR4
NQO2
PABPN1
LHB
LBX2
SESTD1
ZNF564
METTL7B
DENND5B
SH2D5
C10orf90
SEC23A
PRDM10
SH3BP5L
MLLT10
TTC31
CCDC142
CREBRF
ALDH3A2
MCRIP1
PPP1R27
SDC1
ARPIN-AP3S2
ARPIN
VGLL4
MVP
OCIAD2
DENND1B
PCYT1A
SPINT2
RGPD2
RGPD1
SELENOP
SLC19A3
PDE11A
SLC7A5
VTN
MGST2
PYY
NAGS
PRAP1
MIA3
SF1
CHCHD2
IGSF23
BIRC2
MLF2
MMACHC
CCDC163
PRR7
BAZ1B
MAFG
IQCN
DCLK1
SHISA5
PIKFYVE
PRR3
GNL1
SCAF11
MIDN
CLASP1
NUDCD1
BORCS7
MIIP
SRSF11
LRRC40
GPR137
C11orf24
C19orf33
CCDC186
CD2BP2
IL32
POLRMT
DHRS7B
EPS8L3
RFFL
APOA1
PLEKHJ1
RAB34
HERC5
RBIS
MXD3
TTI2
GFM1
FAM185A
COPS4
MBNL2
PERP
MOV10L1
SH3BGRL2
TIRAP
MTFR2
DKK4
SHPK
CTNS
VWA7
EMP1
NR1D1
MSLN
CRPPA
SMYD5
PTS
SOD2
SLC25A28
PPM1D
PPP1R9B
TMEM71
PHF20L1
PYGL
MFAP4
PDXP
RABGGTB
FHDC1
BEST3
IDH1
INTS9
HMBOX1
TBC1D23
UBR4
C1orf174
PANK1
TRIM14
DKK1
CDK11A
PPP1R15B
BLCAP
SMARCD2
SLCO2B1
PGLYRP2
PACSIN2
NOSTRIN
RPL41
CPHXL
RCAN1
HPS5
GTF2H1
COQ5
SOS1
NCSTN
COPA
PEPD
CLRN3
ISL2
MRPS30
WDR81
ERICH4
APOBEC1
UGDH
GPT
RPL34
TBP
PSMB1
CSNK1A1
TTI1
RPRD1B
BTBD19
TCTEX1D4
GABARAPL1
NIBAN2
ZNF512B
UFL1
PPIP5K2
GIN1
HNMT
MSH5
ACSL5
U2SURP
CIDEC
SEMA3B
PITPNM1
HMOX1
POMGNT1
CMPK1
LRP1
SELENOI
ADGRF3
ETV4
HSPE1-MOB4
HSPE1
HSPD1
TMEM254
HINT2
YAP1
CDC25A
PHACTR4
AGPAT1
RNF5
KLC4
MRPL2
CLK2
ACOX2
ACSL1
CHMP4B
AWAT1
CNOT2
LINS1
ASB7
PARP4
BLOC1S5
BRCA1
STN1
NFXL1
FDXACB1
C11orf1
HDHD5
RPS15
CLNS1A
ARHGAP45
ALKBH7
RAB30
BEGAIN
TIMMDC1
MICAL1
SLF1
KIAA0825
PPIH
ABCC2
ACIN1
C14orf119
SRSF4
KIF16B
TRIM6-TRIM34
TRIM6
TAGLN2
TMEM17
PPP2R5B
VPS54
PJA2
RPGRIP1L
FTO
STX18
G6PC2
ABHD2
ATP5MC3
PRXL2A
SFT2D3
SNRPF
ARPP19
ASAH1
RNF125
SLC26A6
DAPP1
PTGR2
SMARCE1
CRK
PRKCSH
CCDC151
DCLRE1C
IBTK
TBX1
SCARA5
RPL27
PHF5A
ACO2
ARHGAP10
TRIM15
KATNB1
KIF21A
SLC31A1
FKBP15
USP16
CCNI
FLVCR2
HNRNPH1
OGFOD2
RAB37
ZNF184
PELO
ITGA1
TRPC4AP
RFT1
RFX2
MMP20
STK40
GOLGA8B
MTIF2
SUCO
TAOK3
LSM14A
TOMM70
LNP1
POT1
PAQR4
TCP1
MRPL18
OGA
LRRC6
KRT8
PRR5
SMIM14
NEURL2
CTSA
PWP1
PRDX6
RBM7
C11orf71
CEP128
STAT6
EPS8
PDSS2
POLR2H
SAXO2
EFL1
NRL
DCAF11
PSMA5
SLC26A1
MAP2K3
TOMM40
MRPS28
CYB5R3
PCGF5
RNF114
LARP1
LAPTM4A
CDC14A
TMOD1
UGGT2
CISD3
CAPS2
ARHGAP12
ZBTB20
RBM8A
SLC50A1
CLPX
UBN2
SAXO1
RRAGA
POLDIP3
PPID
AP3S2
MYL12B
ISCA1
PTP4A1
MTRNR2L9
SP2
GM2A
USP36
KATNBL1
NR2F1
NQO1
TRAF4
TYSND1
RNF169
PPP1R37
CLDN4
FAM169A
NUP107
FBXW5
C8G
BOLA1
LAMA3
NOP9
DHRS1
MAP1LC3C
ZNF230
CAPN2
SLC28A1
KIFC3
CFLAR
ZNF747
UQCRC2
FZD5
RB1CC1
IFNGR1
PUS10
PEX13
SECISBP2
RNF212B
CCNL1
PPME1
C2CD3
NIP7
COG8
GPANK1
CSNK2B
ESCO2
LGALS1
ZSWIM8
SNRPA
C19orf54
HEPH
CCDC71
CCDC93
CEP85
ATAD1
BCL2L15
SHF
C11orf52
H4C12
USP3
SGPP1
ZSWIM3
ACOT8
ZNF181
SMU1
TTC39C
HSCB
CHEK2
ZNF860
OSBPL10
MANF
CDH3
ANKRD40CL
PRAG1
FASTKD1
TUBG1
RETREG3
FDX1
CCNH
ULK4
VMP1
PTRH2
MGAT4B
CD68
TBC1D31
EMC4
CNOT6
SLC2A14
STK11IP
SEC24C
DAP
OSBPL7
TMCO1
BHLHA15
TEN1
ACOX1
PRPF40A
TMEM9
ZFYVE16
GTF3C2
S100A2
METTL8
DCAF17
APOA2
SUOX
ALDH3B1
PTPRG
CLUAP1
GGCX
PRKCI
HSD17B14
NUFIP1
GPALPP1
ADGRA3
ZNF384
CYCS
KCTD7
RTKN
PDGFB
SLC25A24
VPS26B
NCAPD3
MT1F
ADAR
HADHB
HADHA
DQX1
SERPINA1
HPCAL1
FBXL19
H4C11
OSR2
EIF4EBP3
WBP1L
ZNF225
ANKRD13A
RTP3
SLC35A2
RTN4
ST7
SCP2
RBM33
THADA
MRPS21
TMEM181
VIRMA
UFSP1
QTRT2
CCDC191
EIF4E
TATDN3
NSL1
SLC25A45
HTRA2
ASF1B
LNX2
POLR1D
EHD2
HBP1
ETS2
TPT1
PTK2B
GUCA2B
FAM136A
TRIM35
BRIP1
PNPO
CD46
KIF20A
BRD8
ST3GAL6
CCNG1
C9orf85
ABHD17B
SMC3
TIAL1
PACS1
HSD17B11
ARSB
SMIM13
NAGPA
IQSEC2
CALML4
SLC35A3
ZNF460
NDRG1
PDE4C
PRPF8
UBE2D3
SKA2
PRR11
MXRA7
OTULIN
EFNA2
PPP1R3D
FAM217B
THOC2
RPS6KA1
DCTN2
INHBE
EPN2
MRPL24
TMEM14C
SYNGR4
BCAP29
UPP1
GBF1
HDHD3
LEKR1
ECH1
MMADHC
FAM161B
COQ6
OCIAD1
CXCL9
SF3B5
PKP2
VCPIP1
C8orf44-SGK3
TMBIM6
TTC14
SMAGP
AMT
AQP3
TMEM82
NME1-NME2
NME1
RBM27
RGMB
SEC16B
MSL2
SLC39A7
RXRB
NDST1
VAMP5
NOLC1
ASB9
PGM1
LRP10
ZNF827
ISG20
CTH
ZNF576
IRGQ
MCC
MAOB
HAUS4
AHCYL1
KLK6
GALM
ALG14
DUS2
DDX28
ADPRHL1
ATF4
RFC3
POLD3
MUS81
TLNRD1
VIM
TMTC3
CEP290
POC1A
BLOC1S2
HSPA5
RAB11B
VTA1
NMBR
MED20
BYSL
KRTAP5-10
ZBTB43
COMT
RGL1
ARPC5
SNRPB
SERP1
EIF2A
PEX6
RMND1
ARMT1
TIMM10
KRT80
ARL4A
EIF1AD
BANF1
LRIG2
HSD17B8
SGMS2
PGAP3
ERBB2
C16orf70
C2orf49
PPP1R13L
PKP3
GPR108
HIKESHI
AFG1L
URB1
BPHL
DNAJC14
TIGD4
ARFIP1
CEACAM20
FAM83E
C11orf91
SLC16A5
TMEM256
SORD
CCNT1
ZNF286A
ZNF823
EIF2AK3
PCM1
VIL1
C11orf65
RNF121
LOC100133315
CCR7
BSDC1
NPTN
PSMB4
NADK
ZNF449
RSPH14
KIAA1109
DCAKD
NMT1
SREBF2
DNAJB5
MGAT5B
UFD1
CDC45
CYBA
LDAH
ANKRD13B
NDUFB6
EED
ZNF639
PEF1
OPA3
LOC100289561
HLA-A
LIN37
POLR3A
HAAO
PKP4
HNF1A
IQANK1
FAM83H
AGMAT
ABCC6
ZNF567
ZNF232
PCYT2
SMG5
AQP11
APOB
PINK1
F10
DENND2B
ORC2
GSDMD
AHCY
F7
AHSG
CDKN2AIP
ACY3
SLC7A7
GAMT
PLEKHG6
C9orf64
ENTPD8
FYB2
NID1
SUCLA2
NR0B2
C1GALT1
DOK4
ZNF214
NLRP14
PLXNB2
RAP1GAP
ASGR2
CBS
XYLB
SLC45A4
ANKS4B
NDUFA6
CFB
ATXN7
AJUBA
ISOC1
PPIL2
GDI2
RAB32
MMP15
ABCD3
CDIP1
TCIRG1
TMEM177
CHST13
C3
RIN3
DNAJC22
ANXA9
MGAT1
SDCBP2
CA5A
NEU4
HMGCS1
ATP7B
ALG11
GNG4
IL11RA
TM4SF5
ETFA
CPPED1
IQGAP2
SLC35D1
SEPTIN9
AGT
SARDH
SMLR1
MRPL20
MAF
STARD7
PAAF1
COA4
STAT5B
PALM2AKAP2
IL7
GIPC2
PDLIM2
TMBIM1
FNIP1
DONSON
MST1
AKAP1
TFR2
LCAT
ERF
VEGFA
LOC100129484
PROZ
H4C3
NGEF
UBA6
TK1
SLC36A1
HGD
MAN2C1
CBY3
AMACR
DNMT3A
UHRF1BP1L
SNTG1
EPHX2
QPRT
FGFR4
PKLR
EPS8L2
ANK3
SPPL2A
MYADM
CLDN19
PTPA
CRAT
PAK4
F12
ASPDH
ADGRG7
GRTP1
ABAT
N4BP2L1
TRMT2A
RANBP1
SLC22A3
SERPINF1
GPR35
PGPEP1
APOC3
TNFAIP8L1
NIPSNAP1
TMEM139
TACO1
ADD3
CAMSAP3
RMND5A
ASL
UCKL1
GALK1
VANGL1
GLTPD2
APOC2
ZNF444
GCHFR
CYP8B1
WDR90
SF3B2
TNS3
ZFAND2B
ZBTB4
POLR2A
TJAP1
MIEF1
MFN2
RBP5
UBA5
ZFYVE27
DAO
DOK7
PLA2G12B
ZBED4
CAMK1
C18orf21
CYB5A
UMPS
DIP2C-AS1
NUP210
RBMS1
LEAP2
ACOT2
RWDD3
TMEM150A
ASGR1
TRAPPC10
C4BPB
AIFM2
FTCDNL1
F2
GDF15
TPRN
PDZK1
PLXNB1
BCL9L
SLC39A5
DRG2
E2F5
CACNB2
NSUN5
CSRNP1
DLC1
ATXN1
TECR
DNAJB1
MAF1
ACO1
SPATA2
ITPK1
GFER
CTDSP1
PYROXD1
C1orf210
RDH5
STK24
CAMKK2
TREH
C4B
C4B_2
PROS1
ATP11A
ATXN2
SLC22A7
TBCCD1
AMN
WFDC3
DNTTIP1
SENP1
PFKM
MRPL40
HIRA
SH3BP2
NUDT16
MOGAT3
AJM1
HPR
WDR36
RFPL2
GPHA2
NFATC3
TP53I3
SSTR1