ChIP-Atlas: Target genes

Potential target genes for HOXD1

Query protein: HOXD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10477187 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXD1's Target genes

◢ HOXD1: Average

◣ SRX10477187: Hep G2

◢ SRX10477188: Hep G2

◢ SRX360007: LoVo

◢ HOXD1: STRING

NPAS4
IQSEC3
ING3
XKR7
INSM2
DEPP1
LIN28A
NKX1-1
HTR5A
FAM24A
NRL
DCAF11
CELSR3
GLRA1
TNFAIP2
KCNH7
L1CAM
RAB37
CPLX2
MTRNR2L2
MSH3
DHFR
MTRNR2L1
EPHA10
SLC6A12
SCRT1
BARHL1
SH2D3C
SMIM17
MTRNR2L8
FRG2C
CHGB
FAM3A
RTBDN
OTX1
STX16
SMIM19
SLC20A2
DUX4
RANBP3
TBC1D10B
MYLPF
ITGB1BP1
CPSF3
SNAP25
RIN2
MAPK8IP2
UNC80
SCRT2
LHFPL5
ZNF670
ANK1
DLGAP3
IL11RA
SST
SH3BGRL2
GDAP1L1
HES3
OGDHL
SIGLEC10
KCNK12
VGF
MRPL39
MYT1
GRM1
CHRNB2
GCFC2
KCNH6
NPPB
SCGN
OPA3
MRPL44
CEMIP
PLEKHM3
SLC12A5
FRG2
NTSR2
TMEM242
PGBD5
MMP24
PPP3CA
SRRM3
AAR2
RBM28
SEZ6
IPO4
H4C12
CYB5R4
PDE4C
RPS7
NUF2
CDIP1
HPCA
SCFD1
LEMD3
CHRM4
PSMF1
RAD54L2
PTPRN
MFF
PET117
KAT14
EXT1
PCNA
USPL1
HMGB1
PIH1D1
ALDH16A1
HDAC2
SPECC1
MED23
NOC3L
CPPED1
NDUFAF5
ESF1
GTF3C3
VWC2L
MTF2
CDK5RAP1
TM9SF1
KATNA1
TRIP4
SLC39A3
ZFYVE27
DNAJC6
ABCC6
PRMT5
RFC1
PTGDR2
MAP1LC3B
FBXO31
DTD2
STMN3
RTEL1
UNC13D
PRMT8
PDE6D
COPS7B
INTS12
GSTCD
NME1-NME2
NME1
SNTG1
TPH2
SLC7A6OS
PRMT7
MARCHF4
NHLRC1
EPM2A
FAM227B
DTWD1
SAR1B
TMC7
TIGD1
EIF4E2
ZNF23
CLVS1
CHGA
RABGGTA
CALM1
METTL9
VTN
SEBOX
SARM1
SLC25A21
ORMDL3
WDR74
H4C3
H1-6
KANSL3
FER1L5
HEATR5A
VAMP4
KDM3A
CCDC88A
NUS1
GRIA2
LTV1
ANKRD34C
DCP1A
APOB
SOGA3
FOXJ3
ZPBP2
IKZF3
RANBP2
TANK
PIK3R3
WTAP
SOD2
SEZ6L2
ASPHD1
EVI5
WASHC2C
C14orf93
TSPAN10
NPLOC4
SP2
SLC35A3
HBQ1
HBA1
LRRC37A3
TRAF6
RAG1
NEUROD1
ODC1
FABP1
CWC25
RESP18
SRSF2
MFSD11
TOB1
GGA2
MITD1
SNRPD1
COMMD1
CCT4
LAMP1
SF3A3
PHF3
AKAIN1
IRF9
PMS2
AIMP2
DPY19L4
NSFL1C
ZNF841
PKP4
CCDC148
MAP3K7CL
CCT8
STAT3
CCDC92B
SLC30A6
HSP90AB1
RSPH3
NFAT5
EBAG9
ACIN1
XKR9
LACTB2
C14orf119
TMEM181
PGRMC2
CCNL1
PAXBP1
DDX1
AP3S2
PSMD3
ZNF473
VRK3
PSMD7
SNAP47
JMJD4
FRA10AC1
TUBGCP3
ATP6V1B2
ZNFX1
USP14
NDUFAF1
FUS
CTNNB1
SNRPB
FN1
CNPY3
PRKDC
MCM4
KIAA1958
C9orf147
XRN2
DHRS4L2
ZER1
SNRPB2
PALB2
DCTN5
CMTR2
UBE2Q1
PDE1C
ZFP1
LRRC59
NDUFA12
UGT1A1
PTPRS
TMEM167B
USP30
RPTOR
NCOA3
PDXDC1
POLDIP3
HM13
BICDL1
ERN1
N6AMT1
HRH3
FGB
SEPTIN9
ZNF451
SCAMP5
MRPS15
EXOC2
ACSL3
TMEM222
MRPL21
IGHMBP2
ZNF165
MOB4
GRM2
SEC23A
PRDX1
ITGB3BP
EFCAB7
ATCAY
NET1
GORASP2
GPCPD1
FAAH
EXOC3L4
FST
TMEM230
ATIC
MARCHF8
PYURF
PIGY
HERC3
MTIF2
CNOT3
MAT2A
NFE2L2
TACO1
POLR2C
ID2
FAM187A
EFTUD2
CCDC103
METTL15
KIF18A
DDX18
THUMPD2
ANKRD36C
ZNF703
AATF
TRIB1
WDR43
SF3B6
FAM228B
ALG1
EBI3
CABP7
NPIPB9
FZD5
TSPYL4
DSE
MRPL40
HIRA
SPTSSA
SLC7A14
FBXL16
RPL31
NUP62
IL4I1
ATF5
KLF11
NOL7
MDP1
CHMP4A
AURKAIP1
THOP1
SGTA
NABP1
TUBD1
RPS6KB1
URGCP
UBE2D4
HSPE1-MOB4
HSPE1
HSPD1
ZNF503
AIP
ALG10B
TCTE3
ERMARD
CERS6
SEC11C
ANKRD36
NCOA5
SLBP
ZC3H7A
USP4
MRPL58
TOMM40L
APOA2
LRP6
COL23A1
HDAC4
TSN
GEMIN2
HOXD1
ABCA3
FAM133B
TF
ANO10
ABHD5
KCNH4
EIF2B3
KCNC3
RNF103-CHMP3
RMND5A
PIGL
NCOR1
SNRPC
RBL1
HECTD1
NUP54
LONP2
ABCC11
FAM53C
CDC25C
PMS1
ORMDL1
VIRMA
TOR1AIP2
TOR1AIP1
TSEN54
CASKIN2
KCTD18
RNF130
OPA1
OPRM1
MUC5B
SPATA25
NEURL2
CTSA
FAM207A
DNAH14
AP3B2
SLC37A4
WDR70
RNF6
HHATL
SLC44A1
CDK5R2
NUP160
CACYBP
JUND
FAM222A
HEXA
ZDHHC7
C8orf33
STX18
DRG2
RTF2
PTP4A2
RTTN
MRPS5
AGMAT
ARFGEF2
MBTPS2
ELMO1
CCNC
ALG6
VTA1
NMBR
ZNF770
CRYM
USP34
LCLAT1
PTMA
SIRT4
NDUFS7
TOMM5
MRPS18C
HELQ
HNRNPD
KIF15
KIAA1143
ZNF461
GPRIN1
SCIMP
TBC1D19
KIZ
PEDS1-UBE2V1
PEDS1
RAB11FIP4
RPS6
EIF2D
ZNF337
OSBPL11
CCDC174
SLC25A51
MANBAL
KDM6B
TEFM
DUS2
DDX28
NXF1
CSTF1
AURKA
GTF2H2C_2
H4C11
NAA20
HEXD
GTF2H2
MLLT1
TAF3
CNTRL
C5
NUDT4
TRMT6
MCM8
SMG8
COQ9
CIAPIN1
GLO1
VPS25
RNASEH1
PPY
NDUFS4
EEA1
PPP4R3B
SPOP
COPS6
PSME3
ZSCAN30
ITPRID2
SUMF2
CCDC117
MRM3
GLOD4
BRMS1L
SRP54
FITM2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
TBL3
SLC24A1
INTS14
POLE4
ANKAR
SPINK1
NDUFC2-KCTD14
NDUFC2
RUVBL1
EEFSEC
BMS1
PTDSS1
MTERF3
YARS1
S100PBP
TRMT61B
DMAP1
USP42
C19orf53
COPS4
ST8SIA3
LOC100287896
LIPT2
ARHGEF12
C17orf75
DUS1L
SPRED2
SPNS1
ACTL6B
CCDC59
RARS1
UTP4
DERPC
CHTF8
CCDC66
PRKAB2
CHD1L
TMEM106B
H3C12
H2BC17
H2AC17
GINS1
ENO1
RRN3
DSTYK
LDHA
CCT2
MCAT
CENPA
ATP5F1E
EIF4A2
RRP1B
HSF2BP
EDC4
WDR35
ZMPSTE24
PNPT1
TRAPPC6B
PNN
LAMTOR5
PCIF1
DRAP1
C11orf68
GOT2
MIA2
PTPN4
CUL5
FUCA2
ZNF579
FURIN
GPR158
HS3ST2
PREPL
CAMKMT
TRIM67
POLR3D
BCL7B
TRIM26
SORL1
PUS1
PEX3
ADAT2
SLC25A10
EGR4
PGAP2
TBCD
LOC102724265
H2BC5
H1-4
DDX19A
GINS3
CBWD1
DCAF10
SLC35F5
H3-3B
DLL3
CCDC43
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SLC25A4
STK25
ADGRG6
FBXO4
RPL10A
STARD4
AP1G2
BAG2
FTL
HDDC2
MTHFD1L
TTC4
CHEK1
CDCA7
DNAJC10
TIPARP
CITED2
RGMB
CCL16
ZC3H6
ZBTB4
SLC35G6
POLR2A
E2F6
ASNSD1
ASDURF
TAF5
CCDC126
PMVK
LDAH
FANCL
EFCAB13
TATDN3
NSL1
SNX5
MGME1
WDFY1
IARS1
PPIP5K2
GIN1
SAYSD1
PHF20
ZNF131
PHIP
GPR6
CRH
FAM162A
CCDC58
STAT1
RRP15
DIS3L2
KIAA1586
TMEM101
RPS15A
GTF2H2C
NUBP1
PPP1CB
EIF3F
ANKRD53
POLR3E
TMEM186
PMM2
PRR13
NDUFS3
KBTBD4
PHF14
CRNKL1
CFAP61
BTG1
JUNB
ANAPC5
EXOSC2
H4C15
H4C14
C16orf72
TRIAP1
C10orf88
SUN2
SRSF11
SERPINB1
RFT1
GDAP1
ABT1
RCBTB2
FAN1
MRPL53
DHRS2
THAP4
ATG4B
GPC6
AGPS
TTI1
RPRD1B
AASDH
API5
PARL
MTX2
MEMO1
NUP50
PYCR1
SF3A2
PLEKHJ1
SH3YL1
ACP1
WDR45B
TVP23B
ADAM17
EIF3B
ALKBH3
GTF3C6
COQ5
ALDH3A2
USP15
CAPN10
PINX1
GTF3C5
CCDC200
ZBTB45
SRSF6
LTBR
NSG2
SEC13
PBK
DIDO1
GID8
CNEP1R1
TMEM183A
RBM45
PDE11A
PUM3
TINF2
SLC25A13
G3BP1
SNRNP35
SACM1L
RETREG2
CNPPD1
TIMM21
FBXO15
SDC4
DEF8
CTSB
COPS8
TMEM107
THUMPD1
P4HA1
HCN2
CCDC83
SHQ1
DPP8
USP47
LARS2
HMGN3
DTD1
PUM2
IDH3B
TTPAL
ARL6IP1
NBPF1
RBM18
MRRF
H4C4
TEX46
KDM1A
ZNF783
FANCD2
PCK2
DNMT3A
ZC3H15
REX1BD
ZNF8
ABCF1
TATDN1
NDUFB9
RPL5
LMCD1
SULT6B1
CEBPZOS
IMP3
C11orf49
SLC45A4
MARCHF7
EDARADD
WDR11
CCDC57
SLC33A1
GOPC
HMGCS1
ZNF518A
SLC25A36
PBRM1
GNL3
KNL1
GTF2IRD2
CCL20
TOP3B
LOC112694756
AKAP10
APOC3
MRPL33
H4C2
H3C2
ATF3
AGFG1
PDP2
CPQ
MMAA
FAM177A1
ADNP
C6orf62
EDEM2
CEBPZ
HPS5
GTF2H1
SEH1L
NEU4
CSNK2A1
NUDCD1
KDM2A
INSR
WDR36
MRPL3
KCTD5
CPNE9
PLAG1
CHCHD7
PRRC2B
TSEN15
TTC23L
R3HDM2
INHBC
BBS1
NUP107
SRPK1
RNF19B
NDRG1
TMEM41A
BCKDK
NID1
LGR5
TTLL4
FBXW2
ESCO1
MED31
C17orf100
XRRA1
SPCS2
BBS5
MTBP
MRPL13
ALG10
GMEB2
ZGPAT
ARFRP1
AARS2
SYN1
SCG3
FAM161A
TXNDC9
EIF5B
SMIM8
SEC62
ORC4
MBD5
TBC1D32
RBP4
CCDC171
WASHC4
ETNK1
CALB1
C6orf163
PPIL4
EPHX2
TIGD6
HMGXB3
SPAG16
GALK2
COPS2
DNAJC11
NDUFV3
DAD1
POLR2J3
RMND1
ARMT1
TRDMT1
ID1
CEP295
EIF3CL
EIF3C
AHR
KLHDC2
EXOSC6
CALM2
PCF11
FEM1C
CCN2
COX16
ZSWIM7
TTC19
DR1
AK3
CDH15
NUP153
ARSB
PPM1D
SPTLC1
LUC7L
ATP7B
ALG11
C12orf73
HLCS
INTS2
ERO1A
FAM98B
PPP5C
POR
SLC38A2
TDRD7
CUL9
LRRC58
ZCCHC4
MFSD14A
EZH2
PCCB
BACH1
G2E3
TMEM169
PECR
LSM12
G6PC3
KPNA5
HEXIM1
USP31
CBFA2T2
PPIG
ARIH1
DDX19B
VAMP1
FAM76B
CEP57
SLC18A3
CHAT
CCDC107
LATS1
MKS1
TOMM34
CLCN7
CFL2
PNPLA7
MRPL41
USP37
CNOT9
C8orf37
CEP68
MEIS1
SNTB1
MRPS2
ESCO2
C9orf116
PPP1R3C
NGDN