ChIP-Atlas: Target genes

Potential target genes for HOXD1

Query protein: HOXD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10477188 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXD1's Target genes

◢ HOXD1: Average

◢ SRX10477187: Hep G2

◣ SRX10477188: Hep G2

◢ SRX360007: LoVo

◢ HOXD1: STRING

NPAS4
XKR7
IQSEC3
ING3
DEPP1
INSM2
NRL
DCAF11
NKX1-1
HTR5A
TNFAIP2
LIN28A
FAM24A
MTRNR2L2
MSH3
DHFR
CELSR3
L1CAM
MTRNR2L1
CPLX2
RAB37
SLC6A12
SH2D3C
GLRA1
KCNH7
SMIM17
TBC1D10B
MYLPF
FRG2C
MAPK8IP2
MTRNR2L8
IL11RA
DUX4
RTBDN
RANBP3
OTX1
BARHL1
CHGB
DLGAP3
EPHA10
SCRT1
ORMDL3
OPA3
HPCA
RIN2
CCDC92B
SLC45A4
LHFPL5
MYT1
SRRM3
SMIM19
SLC20A2
SIGLEC10
VGF
SNAP25
KCNH6
MMP24
HES3
INTS12
GSTCD
WDR74
ITGB1BP1
CPSF3
SLC7A6OS
PRMT7
FAM3A
GRM1
STMN3
RTEL1
KCNK12
PCNA
JUND
UNC80
PEX3
ADAT2
FRG2
SST
METTL9
PLEKHM3
PTPRN
SCRT2
CYB5R4
NDUFAF5
ESF1
ZNF670
EBI3
CDK5RAP1
GDAP1L1
CHRNB2
DNAJC6
GTF3C3
RANBP2
STX18
ABCC6
SPINK1
DUS1L
NTSR2
SLC39A3
KLF11
TMC7
PSMF1
STX16
DCP1A
VTN
SEBOX
SARM1
OGDHL
SP2
POLR3E
PPP3CA
IPO4
C14orf93
DDX1
FURIN
CWC25
TMEM181
CCNC
JPH4
COPS8
MRPL44
SH3YL1
ACP1
NPPB
PIH1D1
ALDH16A1
MTF2
MOB4
MITD1
NOL7
H4C12
TRMT61B
STK4
ANK1
PDE6D
COPS7B
TMEM242
EXT1
USPL1
HMGB1
MARCHF4
SF3A3
TTI2
PDXDC1
SLC35A3
DPY19L4
MED23
USP30
TMEM186
PMM2
SVOP
PTGDR2
NME1-NME2
NME1
PRR13
IRF9
COMMD1
CCT4
CHRM4
NSFL1C
FAM227B
DTWD1
TMEM107
SCFD1
ACTL6B
TMEM41A
PHF3
VNN3
RAD54L2
TRIP4
SNAP47
JMJD4
MRPL58
GPR158
MRPS31
PRMT5
LRRC59
CEMIP
RBM28
USP14
NDUFS3
KBTBD4
RPS7
TACO1
PHF1
TIGD1
EIF4E2
EXOC3L4
WDR36
AAR2
TSPAN10
NPLOC4
SYP
HBQ1
HBA1
CCL20
SLC12A5
LRRC37A3
ATCAY
PMS2
AIMP2
HSPE1-MOB4
HSPE1
HSPD1
DRG2
SCIMP
RABGGTA
WTAP
SOD2
CCNL1
ANKRD36
KANSL3
FER1L5
HOXD1
RTF2
SH3BGRL2
MRPL40
HIRA
SLC30A6
SNRPB2
GCFC2
BCKDK
PGRMC2
PPP4R3B
HEATR5A
UGT1A1
TEFM
HDAC4
LEMD3
MFF
UBE2Q1
PTPRS
E2F3
TM9SF1
FOXJ3
EXOSC6
KRCC1
CPNE4
MAP1LC3B
FBXO31
DTD2
SLC25A21
TMEM222
MRPL3
NUF2
KDM3A
CCDC88A
ZNF292
ZNF841
CCDC59
PET117
KAT14
NUDT1
MRM2
XRN2
FGB
PRKAB2
CHD1L
HS3ST2
SEZ6
MTIF2
TSEN54
CASKIN2
SAR1B
SNRPC
HHATL
PTP4A2
GMEB2
RBL1
SLC44A1
RGMB
AP3S2
PREPL
CAMKMT
UCHL5
RO60
EXOC2
SOS1
EAPP
SF3B6
FAM228B
PTMA
TBCD
CALM2
NUP153
MRPS23
CBWD2
FAN1
TOX4
RAB2B
STRADA
MRPL53
SCGN
HDAC2
CDIP1
PKP4
CCDC148
STK25
PHF14
POLR2J3
RGS3
CNPY3
GOT2
NFKBIA
SSBP1
ZBTB45
THOC3
NCOA5
SAAL1
THUMPD1
DNAJC24
DCDC1
UBAP2
RESP18
AIP
TRMT6
MCM8
HDDC2
PYGB
BICDL1
ANAPC11
ALYREF
SEZ6L2
ASPHD1
FST
TBC1D19
SMG8
GRM2
MDP1
CHMP4A
OPA1
PPP1R3C
HMGA1
VWC2L
TANK
MRM3
GLOD4
MMAA
RAB5IF
SEPTIN9
SPATA25
NEURL2
CTSA
RMND1
ARMT1
DHDDS
PPM1H
ZNF165
SEC23A
ABCA3
NOC4L
DDX51
FRA10AC1
TSN
RRP1B
HSF2BP
LOC102724265
PMVK
CDKN2AIPNL
RPL27
RSPH3
HECTD1
DUS2
DDX28
KIAA1586
INSIG2
ZNFX1
ZNF703
AATF
EXOSC2
XYLB
POLR1H
MTHFD2
TRIM74
TRIM73
NDUFAF1
CNOT3
NXF1
HAAO
DNAJB3
NOP9
DHRS1
GRIA2
KCTD5
PPIL4
SKOR1
BLOC1S5
PGBD5
CALM1
CSTF1
AURKA
DCAF10
SLC18A3
CHAT
PIGU
SNX17
EIF2B4
ENOSF1
CLK1
RNF130
RBM12
CPNE1
TRMT2A
RANBP1
SCAMP1
RFT1
MAP2K2
LAMP1
ZGPAT
ARFRP1
FGA
CBS
PDE4C
PSMD3
TMEM106B
TOMM22
TMEM14B
HPCAL1
UNC13D
STAT3
DMAP1
H3C12
H2BC17
H2AC17
LDAH
BIRC2
CCL16
FAM98B
MAGOHB
SEC14L1
RFC1
ZPBP2
IKZF3
CPNE9
TTC30A
ACOX3
TRMT44
NDUFA12
KIZ
BCL2L11
BRMS1L
NDUFC2-KCTD14
NDUFC2
DEXI
CLEC16A
ARMH3
APOB
TMEM230
MIA2
POLDIP3
PTPN4
MTHFD1L
SNX18
LEAP2
ACAD9
PRMT8
AKAIN1
GJA10
GOSR2
NSRP1
FN3K
RAB17
TMEM179
FUS
ZC3H6
LCMT1
NEUROD1
PDE1C
NUP54
USP42
TTC4
RBM45
PDE11A
CETN3
MRPL39
WASHC2C
TRDMT1
FANCL
CRH
STOML2
RRBP1
SEC24A
SLC39A13
NHLRC1
TUBGCP3
CTNNB1
NET1
SIRT4
NDUFS7
RUSF1
ZNF425
ZNF398
MDM2
ETFA
PUM2
G2E3
SNF8
CYGB
SREK1
SNRPB
ATIC
RUVBL1
EEFSEC
TMEM101
KRR1
MNAT1
DNAJC25-GNG10
DNAJC25
ZNF843
DDX56
FAM222A
SRP54
TDP2
ACOT13
ERLEC1
ASB3
TMEM248
H1-2
LYSMD3
PIK3R3
IDH3B
PCK2
TOP3B
LOC112694756
GZF1
ZNF296
GEMIN7
BUD13
RBFOX2
BCL6
RPS15A
H4C15
H4C14
THNSL1
SUMF1
SMG1
AP3S1
ABHD12
NOC3L
USP40
NCL
FAM163B
ATF2
CPPED1
COPS7A
KNOP1
IQCK
POLR3G
MBLAC2
CLUAP1
C16orf90
KATNA1
GORASP2
RPS6
COQ9
CIAPIN1
SPOP
DNMT3A
PCDH8
NOL10
CTDSPL
PIGO
C20orf144
ACTL10
MIDEAS
SRSF2
MFSD11
MRPL21
IGHMBP2
FAM187A
EFTUD2
CCDC103
LONP2
ABCC11
EIF2D
FITM2
ZBTB4
SLC35G6
POLR2A
DHRS2
PPP5C
ZSCAN9
SLC35B2
RPTOR
FBXL16
THAP4
ATG4B
NID1
BIRC6
SH2D6
HAL
SULT1A1
SLX4IP
MKKS
CIBAR2
CABP7
TRIM67
WASHC1
ETV4
YTHDF1
PBOV1
IL1R1
EDC4
AARS2
EEF1AKMT2
ERCC5
TTC26
EIF2B5
VTA1
NMBR
GTF2H2C_2
CHEK1
GTF2H2C
FAM177A1
H4C5
ACY1
CTBS
SLC51B
TBPL1
WASL
H2BC7
METTL15
KIF18A
BMS1
C16orf72
LGR5
PRORP
PPP2R3C
CIAO3
ZADH2
TSHZ1
ADGRG6
TRIAP1
SARAF
KHK
RPS15
ASF1A
CD164
PPP1R1B
CLVS1
EFCAB13
WDR45B
SYN1
SCG3
TAMM41
DCP1B
MPHOSPH6
DNAJB13
GINS1
TTPAL
TTLL4
PPP1R3E
BIRC5
GMCL1
TRIM44
UNC50
COA5
KIF16B
NAT10
CRLF3
HEXA
E2F6
ADNP
TUBB3
NSA2
MC1R
GFM2
TOB2
CNN3
CPT1A
RPS8
PRDX1
ALG10B
GEMIN2
FAM207A
H4C11
PTDSS1
MTERF3
RARS1
AKAP10
ENTPD6
ATG16L1
TRMU
TRIM33
UTP3
TMEM212
NFAT5
CRLS1
NOL11
CCNJ
INHBE
RPL12
LRSAM1
ATP5MC2
NOCT
ANXA2
ARL14EP
RABL2B
ESYT3
MED15
ZNF451
C10orf88
TVP23B
ARFGAP3
SRFBP1
EEF2K
TGOLN2
ATP2B2
ISOC1
RBPJ
PRKDC
MCM4
ARL6IP1
TBC1D13
WFDC3
DNTTIP1
UGGT1
NRSN1
KIAA1841
HADHB
HADHA
SLC25A10
GPC6
RNF149
HUS1
ZSCAN25
GCHFR
CYCS
ZNF460
PDHX
APIP
SLC39A4
PLA2G15
LYZ
EPHX1
CPSF1
CDCA7
OR6B2
NDUFA10
BAIAP2
SPATA2
THOC1
CUL7
IMPDH2
SUGP2
SMIM3
ELK4
ARMC6
TOB1
H2BC5
H1-4
TMEM169
PECR
LSM12
G6PC3
MACC1
ATXN2L
FSTL4
GSPT1
MAP3K4
FCRLA
CSF3R
SNTG1
C16orf46
GCLC
C2orf42
ZNF354B
IPO13
HBM
HBA2
CHIC2
EVI5
ENO1
PLAG1
CHCHD7
TAB1
PIKFYVE
RFXANK
BORCS8
AIFM2
DPH7
USP36
IL1RN
HINT3
LTV1
RPL31
RRN3
WDR35
C6orf62
EPHX2
MMADHC
AHCY
NARS1
NUDT15
ZNF22
APOL2
SCAMP5
FAM133B
FAM53C
CDC25C
SRSF6
LTBR
MRPL16
ABCB6
PPIL3
NIF3L1
SEC22B
RNF144A
LAP3
H4C3
H1-6
ACSL3
DDX18
OPRM1
C19orf53
AGPS
NBPF1
CCDC107
CLN5
RMDN2
SPON2
TBRG4
PUM3
RBM18
MRRF
H4C4
PCF11
FEM1C
NGDN
KRI1
CDKN2D
MOGAT1
USP18
ZNF212
TCAIM
TASOR
RSAD1
UGT2B10
CEP350
ATP6V0A1
MARCHF8
CDK5R2
NAA20
SUN2
TTI1
RPRD1B
AASDH
CCN2
LATS1
PCNX4
POLR3B
CTSH
RPL29
INHA
COX20
ZBTB3
SELENOI
ATXN7L2
ADGRF3
ODC1
ZNF473
VRK3
MAT2A
TRIB1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ROMO1
NFS1
NMS
VARS2
SIK2
ATXN1L
RSRP1
CCNL2
RAB10
WDR33
TEX2
PSMC2
IL9
DNAJC2
CHGA
NSG2
MARCHF7
POR
TUFM
SH2B1
TNFRSF21
RGPD8
RGPD5
OXA1L
WASHC5
NSMCE2
FUT5
ILF3
CHD8
PRM2
PRM1
NKD1
C12orf65
APOA1
SPTSSA
ZNF503
TATDN3
NSL1
CRNKL1
CFAP61
P4HA1
TMA16
CASC3
TSFM
CD320
ARHGAP40
CDC42
FANCA
SRARP
MST1L
FAHD2A
DCAF8
NUS1
MUC5B
CCT2
TINF2
SLC38A2
PUS10
PEX13
PXT1
KCTD20
BLOC1S6
ITPR1
PGAP3
ERBB2
FASTKD1
LARP1
TF
POLR3D
COX16
LRRC57
HAUS2
HEXB
CEP192
KMT2D
PIGF
CRIPT
ATAD5
SLC6A11
RHBG
IREB2
FBXW8
TPH2
DHRS4L2
TCTE3
ERMARD
SLC35F5
SNX5
MGME1
RUNDC3A
SUPT3H
MESP2
FEM1B
TRPC4AP
ZNF543
EFHD1
NFATC3
KIAA1958
C9orf147
DNAH14
TBL3
SPRED2
FAM162A
CCDC58
DIABLO
TIMM22
BHLHE40
STAG1
WASHC2A
VAPB
TCAF1
RAD54B
FSBP
TUT1
NUP85
ORAI3
F2
DNAJC19
ANAPC4
ATP6V1B2
TOMM5
COPS6
DDX19A
GDAP1
PRRC2B
FAM161A
RDH14
ZNF721
PIGG
ZNF341
EMC8
COX4I1
SECISBP2L
ERBB3