ChIP-Atlas: Target genes

Potential target genes for HOXD1

Query protein: HOXD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HOXD1 | STRING
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HOXD1's Target genes

◢ HOXD1: Average

◢ SRX10477187: Hep G2

◢ SRX10477188: Hep G2

◢ SRX360007: LoVo

◣ HOXD1: STRING

NPAS4
XKR7
IQSEC3
ING3
INSM2
DEPP1
NRL
DCAF11
NKX1-1
HTR5A
LIN28A
FAM24A
CELSR3
TNFAIP2
GLRA1
MTRNR2L2
MSH3
DHFR
L1CAM
CPLX2
RAB37
MTRNR2L1
KCNH7
SLC6A12
SH2D3C
SMIM17
MTRNR2L8
EPHA10
BARHL1
FRG2C
TBC1D10B
MYLPF
SCRT1
CHGB
RTBDN
OTX1
MAPK8IP2
DUX4
RANBP3
IL11RA
DLGAP3
FAM3A
RIN2
SMIM19
SLC20A2
SNAP25
LHFPL5
ITGB1BP1
CPSF3
STX16
OPA3
UNC80
SIGLEC10
MYT1
VGF
SCRT2
HES3
ZNF670
HPCA
KCNH6
SST
GDAP1L1
SRRM3
KCNK12
ORMDL3
GRM1
ANK1
OGDHL
MMP24
CHRNB2
CCDC92B
SH3BGRL2
PLEKHM3
FRG2
NPPB
CYB5R4
PCNA
NTSR2
MRPL44
INTS12
GSTCD
SLC7A6OS
PTPRN
PRMT7
STMN3
RTEL1
PPP3CA
SLC45A4
WDR74
NDUFAF5
ESF1
GCFC2
TMEM242
IPO4
CDK5RAP1
PSMF1
CEMIP
COL23A1
H4C12
GTF3C3
METTL9
DNAJC6
ABCC6
MRPL39
SLC39A3
SLC12A5
SCGN
PIH1D1
EXT1
ALDH16A1
RBM28
USPL1
HMGB1
CHRM4
TMC7
AAR2
SCFD1
MTF2
RPS7
MED23
RANBP2
RAD54L2
VTN
SEBOX
SARM1
PDE6D
COPS7B
DCP1A
MARCHF4
SEZ6
PTGDR2
NUF2
NME1-NME2
NME1
LEMD3
SP2
PGBD5
TRIP4
MFF
C14orf93
PRMT5
FAM227B
DTWD1
JUND
PET117
KAT14
CDIP1
EBI3
CWC25
MITD1
TMEM181
TIGD1
EIF4E2
DDX1
TM9SF1
SLC35A3
PDE4C
HDAC2
MAP1LC3B
FBXO31
DTD2
PEX3
ADAT2
SF3A3
DPY19L4
KLF11
RABGGTA
COMMD1
CCT4
STX18
IRF9
SAR1B
KANSL3
FER1L5
VWC2L
MOB4
SLC25A21
NSFL1C
PDXDC1
HEATR5A
TSPAN10
PHF3
NPLOC4
HBQ1
HBA1
USP30
KDM3A
CCDC88A
WTAP
SOD2
SPINK1
LRRC37A3
NOL7
DUS1L
FOXJ3
SNAP47
JMJD4
CCNC
RFC1
UNC13D
USP14
PMS2
NOC3L
AIMP2
CPPED1
LRRC59
PRMT8
SLC30A6
CCNL1
CALM1
KATNA1
FURIN
PGRMC2
ZNF841
NHLRC1
TRMT61B
POLR3E
SNRPB2
TANK
TACO1
SEZ6L2
GRIA2
EXOC3L4
ASPHD1
UGT1A1
UBE2Q1
MRPL58
ATCAY
PTPRS
MAMDC2
AP3S2
XRN2
RESP18
COPS8
PKP4
CCDC148
SH3YL1
ACP1
ZPBP2
IKZF3
APOB
TMEM222
FGB
MRPL40
HSPE1-MOB4
HSPE1
HSPD1
HIRA
SNTG1
CLVS1
ANKRD36
CNPY3
TMEM186
PMM2
HOXD1
EXOC2
ACTL6B
RSPH3
MTIF2
WASHC2C
LAMP1
PRR13
FRA10AC1
PIK3R3
HDAC4
TPH2
ZNFX1
NEUROD1
DRG2
STAT3
RTF2
NDUFAF1
GPR158
EPM2A
BICDL1
SF3B6
SCIMP
FAM228B
AKAIN1
PSMD3
SEPTIN9
CHGA
TMEM107
GRM2
TSEN54
SNRPC
FST
CASKIN2
ZNF165
RBL1
H4C3
H1-6
TEFM
SEC23A
ZNF23
PPP4R3B
LTV1
SRSF2
NDUFS3
MFSD11
KBTBD4
HHATL
SLC44A1
NDUFA12
FUS
PTP4A2
TMEM41A
TUBGCP3
NCOA5
CNOT3
ZNF703
NUS1
AIP
AATF
MDP1
CTNNB1
CHMP4A
POLDIP3
EVI5
SNRPB
PDE1C
STK4
PTMA
CCDC59
ZFYVE27
TSN
TMEM230
ABCA3
WDR36
PRKAB2
CHD1L
OPA1
CCL20
TOB1
HECTD1
SPATA25
NEURL2
MRPS31
HS3ST2
CTSA
TTI2
ODC1
NFAT5
NET1
SOGA3
RPTOR
PREPL
CAMKMT
TBC1D19
TRMT6
SVOP
RNF130
MCM8
ATIC
TBCD
SMG8
RGMB
MRPL21
IGHMBP2
SYP
BCKDK
GORASP2
PRKDC
MCM4
MRM3
GOT2
GLOD4
DUS2
DDX28
MRPL3
STK25
NXF1
FAM187A
EFTUD2
CCDC103
ZNF473
VRK3
CSTF1
AURKA
EXOSC6
TRAF6
RAG1
NUP54
FAN1
METTL15
KIF18A
ZNF451
PHF14
MRPL53
CABP7
RRP1B
PRDX1
HSF2BP
HDDC2
SNRPD1
KIZ
FBXL16
GMEB2
ATP6V1B2
LOC102724265
KIAA1958
DMAP1
DHRS4L2
C9orf147
ZBTB45
SCAMP5
TMEM106B
BRMS1L
PMVK
NDUFC2-KCTD14
NDUFC2
LONP2
H3C12
H2BC17
H2AC17
ACSL3
ABCC11
ZNF292
FAM222A
THUMPD1
EBAG9
DCAF10
CALM2
ACIN1
SIRT4
NUP153
NDUFS7
KIAA1586
PALB2
DCTN5
EXOSC2
ALG10B
MARCHF8
POLR2J3
MIA2
E2F3
DDX18
USP42
PTPN4
MAT2A
GEMIN2
CMTR2
XKR9
LDAH
LACTB2
FABP1
CCL16
MMAA
GGA2
TRIB1
SRP54
RUVBL1
RPS6
RPL31
RFT1
EEFSEC
VTA1
NMBR
MRPS23
EIF2D
MTHFD1L
MAP3K7CL
COQ9
CIAPIN1
CCT8
FAM207A
SPOP
GPCPD1
RMND1
POLR2C
HEXA
ARMT1
SPTSSA
NCOA3
GTF2H2C_2
FITM2
ZC3H6
PHF1
TTC4
KCTD5
FAM133B
ZNF503
PPP1R3C
UCHL5
RO60
FAM53C
CDC25C
PPIL4
NFKBIA
HMGA1
PSMD7
ITGB3BP
FANCL
EFCAB7
BMS1
ZER1
TCTE3
ERMARD
DHDDS
CRH
ZGPAT
OPRM1
NOC4L
H4C11
DDX51
ARFRP1
WDR43
HSP90AB1
HM13
ALG1
TF
EDC4
CPNE9
TRIM67
TMEM101
PYURF
PIGY
HERC3
FN1
STRADA
SLC18A3
NPIPB9
CHAT
CDK5R2
SLBP
RBM45
PTDSS1
PDE11A
MTERF3
SOS1
SLC7A14
RPS15A
MUC5B
GINS1
ERN1
AURKAIP1
ZBTB4
SLC35G6
RBM12
POLR2A
CPNE1
RARS1
H4C15
H4C14
FAM98B
THOP1
SGTA
RNF103-CHMP3
RMND5A
DNAH14
CHEK1
CDKN2AIPNL
PUM2
HAAO
ADGRG6
THUMPD2
N6AMT1
ZC3H7A
XYLB
FZD5
TOX4
TMEM167B
RAB2B
NAA20
IDH3B
GTF2H2C
DHRS2
THAP4
PCK2
ATG4B
AP3B2
MAGOHB
INSIG2
EFCAB13
CERS6
TRDMT1
TOP3B
SLC37A4
LOC112694756
C16orf72
TRIAP1
TOMM22
ENO1
E2F6
C19orf53
C14orf119
ANO10
ABHD5
TOMM5
SLC25A10
RRN3
PIGU
EEF1AKMT4-ECE2
EEF1AKMT4
DNMT3A
ALG3
ZFP1
RTTN
RAB5IF
WDR35
TMEM14B
MAP2K2
ZNF337
H2BC5
H1-4
WDR45B
TMEM179
SNX17
KCNH4
G2E3
EIF2B4
CDCA7
TBL3
RPL27
MRPS5
COPS6
NID1
NFE2L2
NABP1
MRPS18C
HELQ
FAM177A1
C10orf88
TTPAL
SPRED2
CCT2
PIGL
NCOR1
FAAH
DNAJC24
DCDC1
CBWD2
AARS2
UBAP2
TVP23B
TRMT2A
RANBP1
PYGB
PSME3
LGR5
PPP5C
GPC6
FN3K
FGA
POLR3D
GJA10
TUBD1
TDP2
SLC24A1
RPS6KB1
INTS14
ACOT13
TTLL4
SYN1
SCG3
ID2
ERLEC1
ASB3
AKAP10
ADNP
THNSL1
SPECC1
BCL2L11
ARL6IP1
ZMPSTE24
UTP4
SLC35F5
PPM1H
DSTYK
DERPC
COPS7A
CHTF8
BCL7B
TATDN3
SNX18
PNPT1
PMS1
PEDS1-UBE2V1
PEDS1
ORMDL1
NSL1
DDX19A
URGCP
SUN2
HNRNPD
ANAPC11
ALYREF
AGPS
YARS1
SRSF6
S100PBP
NUP62
LTBR
IL4I1
ATF5
TTI1
SNX5
RPRD1B
MGME1
KIF15
KIAA1143
CRNKL1
CFAP61
ANKRD36C
AASDH
ZSCAN30
SEC11C
PCDH8
NUP160
RUSF1
PUM3
OSBPL11
FAM162A
CCDC58
WDFY1
SEC14L1
NBPF1
RBM18
NSG2
MRRF
KNOP1
IQCK
HEXD
H4C4
CCDC174
BIRC2
ASNSD1
ASDURF
TOMM40L
POLE4
PLAG1
GZF1
EIF2B3
CHCHD7
C6orf62
APOA2
NUDT1
NOL10
MRM2
VPS25
TINF2
THOC3
POLR3G
P4HA1
MRPS15
MBLAC2
GTF2H2
GDAP1
FBXO4
EAPP
DNAJB3
ZNF425
ZNF398
WASHC1
USP40
SSBP1
NCL
ZNF770
MARCHF7
GOSR2
FAM163B
EPHX2
UNC50
TRAPPC6B
TAMM41
SLC25A51
PNN
ENOSF1
COA5
TMEM248
TMEM169
PECR
MANBAL
LSM12
LEAP2
G6PC3
COPS4
ACAD9
STAT1
RPL10A
RNF149
RNASEH1
MTHFD2
BIRC6
ANKAR
USP4
LAMTOR5
JPH4
HCN2
H4C5
TUBB3
POLR1H
PCF11
NSA2
NOP9
MC1R
INHBE
GFM2
FEM1C
DHRS1
API5
PPP1R3E
CCN2
ARFGAP3
STOML2
SNF8
KIF16B
CCDC83
BIRC5
KRR1
CCDC107
ZNF296
TOB2
SLC25A13
RRP15
PRRC2B
GINS3
GEMIN7
CRYM
ZNF461
POR
NGDN
MNAT1
MLLT1
MCAT
LATS1
ENTPD6
CENPA
ADAM17
TBC1D13
ST8SIA3
RRBP1
FAM161A
COX16
TRIM26
SLC38A2
SH2D6
SEC13
ROMO1
PARL
NFS1
CLUAP1
C16orf90
ATF2
ALG6
WDR70
TAB1
MMADHC
KRCC1
GMCL1
TIGD6
RPL12
MRPL16
LRSAM1
HMGXB3
H1-2
EEF1AKMT2
ABT1
OR6B2
NDUFA10
LRP6
ID1
ETV4
EDARADD
ZDHHC7
TSEN15
TAF5
TAF3
LRRC57
HAUS2
GLO1
DNAJC10
ATP5F1E
SRFBP1
KCTD18
EEF2K
CETN3
BAIAP2
AGMAT
TIPARP
SUMF1
MTX2
LCMT1
EIF3B
ZC3H15
TRIM44
SRSF11
SAAL1
PRORP
PPP2R3C
EDEM2
AHCY
TTC30A
SPNS1
REX1BD
LDHA
ITPRID2
HAL
CNTRL
CLK1
C5
TRIM74
TRIM73
SMG1
SHQ1
SARAF
PCNX4
NMS
KHK
CTDSPL
CEBPZ
STARD4
EGR4
CRLS1
ARFGEF2
USP34
TXNDC9
KPNA5
EIF5B
DEXI
CLEC16A
SERPINB1
PUS10
PEX13
MKS1
HEXIM1
ERCC5
CNN3
C16orf46
ZNF8
SEC24A
APOC3
ACY1
WFDC3
TRMT11
TOMM34
RDH14
PIKFYVE
MDM2
HEXB
H3-3B
DNTTIP1
DLL3
COMMD2
CLCN7
AP3S1
ALKBH3
ABCF1
PCID2
MACC1
FBXW2
CUL4A
CTNNA2
BAZ1A
ATP5MC2
TTC23L
RGS3
NOCT
GTF3C6
DNAJC25-GNG10
DNAJC25
ARSB
TDRD7
PBK
KDM8
GPT2
CHPT1
USP31
UCKL1
RUNDC3A
R3HDM2
PCIF1
KRI1
INHBC
GCLC
CITED2
CDKN2D
UQCC1
TMA16
SPAG16
IARS1
G3BP1
DIABLO
CTBS
TGOLN2
SMARCD2
RPL37
PRKRA
PJVK
PCSK1
LOC100287896
LIPT2
ATG16L1
ZNF721
TMEM208
TDRKH
SPATA2
RGPD1
PPM1D
PPIP5K2