ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478135 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◣ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

NPAS4
MTRNR2L2
MSH3
DHFR
MTRNR2L1
FRG2C
HTR5A
NKX1-1
MTRNR2L8
ATL3
DUX4
COL23A1
IQSEC3
XKR7
FRG2
DNAJC11
LIN28A
DHX40
GTPBP6
ZCCHC7
ENOSF1
RTBDN
RPL31
INSM2
EPHA10
L1CAM
CRYAA2
CRYAA
NUP214
E2F6
YPEL1
CEP295
ZNF280D
AIP
MRPL40
HIRA
FAM24A
N6AMT1
PCNA
RNF130
BARHL1
H4C11
DIABLO
HPCA
CPLX2
OPRL1
LKAAEAR1
TTC26
DLGAP3
CYB5R4
SRP19
NBPF1
TASOR
SRSF7
ZNF74
H4C12
CCDC116
AGBL3
RGS2
LAMP1
FMNL3
HES3
TLR5
CTNNB1
TRIM44
OGDHL
LRRC8B
H2BC11
H2AC11
LUC7L2
FMC1-LUC7L2
FMC1
CELSR3
MST1
PSMG1
RFC1
CHCHD3
NOL7
NDC80
METTL4
PMS2
AIMP2
ZCWPW1
MEPCE
RAP1GAP
SRSF6
EXD1
CHP1
THAP7
NET1
RPP25
ERRFI1
CALB1
UBE2Q1
PIK3R3
TARS3
FAM111A
GLRA1
RPA2
LZTR1
SCG3
PRAME
PRMT2
SSBP1
WDR36
NFKBIL1
ATP6V1G2
DDX39B
ATG10
UBN2
HBQ1
HBA1
NXF1
SERPINI1
PDCD10
SLC16A1
KPNA2
DNAH14
P4HA1
PRKRA
PJVK
GAGE2C
GAGE2B
GAGE2A
MRPS33
PNRC2
NKIRAS1
RPL15
ZNF131
MLH1
EPM2AIP1
HPS5
GTF2H1
VPS29
RAD9B
FH
CHGB
SMIM12
FCMR
TRMO
ABCA3
MPZL3
ITPRID2
H4C15
H4C14
SRRM3
EPB41L5
WASHC2C
TCTE3
ERMARD
DSTYK
SEC31A
JMJD1C
REEP3
THAP9
TMEM139
CASP2
MTF2
DLL3
POLR2J3
MAPK8
XKR9
LACTB2
TSEN54
CASKIN2
DPY19L4
KIAA1958
C9orf147
GET4
ZSCAN30
LRP2BP
ANKRD37
TMED1
EIF2D
CDC25C
FAM53C
BZW2
ANKMY2
CNOT4
PIAS1
NUF2
RTL10
GNB1L
AP3S2
CNTRL
C5
RLF
TOP3B
PAFAH1B2
GBA
SF3B5
CERS6
NEK2
EZH2
USP14
TBXAS1
HIPK2
METTL2B
GMNN
TANK
ELAPOR2
DCP1A
CCNL1
CAMTA1
MAPK1
NOP14
GRK4
PDCD6IP
POT1
PGBD5
TEX15
H2BC12
H2AC12
H3C12
H2BC17
H2AC17
TPR
ODR4
SUMF1
H4C2
H3C2
AGPS
H2AC4
TMEM191B
TATDN3
NSL1
TRMT2A
RANBP1
ZNF800
CDC73
TMX4
ANTXR2
THAP5
DNAJB9
GDAP1
LRRFIP2
NCOA5
PCMTD2
VGF
POLE4
PPA2
MLF1
DHDDS
SEH1L
MMAA
TDG
MMADHC
DGCR8
CACNG3
PEX3
ADAT2
CLTC
EPM2A
MED15
SSR3
NUP62
IL4I1
ATF5
FBXO4
MAPK8IP2
H2BC8
H2AC8
SLC35E2A
AKIRIN2
SIK2
FBXO31
BMS1
TUBA1B
MTHFD2
DDX21
LHFPL5
PGBD2
H1-2
SNRPE
MKLN1
CPQ
INTS13
FGFR1OP2
NFE2L2
H4C9
XPC
LSM3
COX18
MKRN2OS
MKRN2
SRSF2
MFSD11
CD55
TNPO1
VTA1
NMBR
KIF14
CUL5
GTF2H2C_2
GTF2H2C
MAT2A
RPS20
ZFR
KCNK12
XYLB
GLB1L2
ZBTB18
ZNF22
SAYSD1
THOC3
PMVK
ZC3H6
NUCKS1
ZNF398
PHOSPHO2
CCDC173
EXO1
PPIL2
ZNF425
ABCC5
CCDC71L
DUSP23
HMGA1
ANP32B
AHCYL2
EIF5A2
NFYC
TMEM106B
KANSL3
FER1L5
CZIB
TCAIM
BNIP2
ASAH2B
INTS12
GSTCD
RPL5
SIGLEC10
ADK
C5orf51
WDR26
RBM22
CDCA7
ARFGAP3
PSMB2
DNTTIP2
SMARCA5
NOLC1
AHI1
FAM3C
SRSF1
RBM28
TMEM242
SPG11
USP9X
PSMD14
ZMYM6
SNRNP48
PIGF
CRIPT
FAM227B
DTWD1
CITED2
BLOC1S5
SGF29
SMCHD1
REM2
TMEM209
SSMEM1
SOD2
WTAP
KIF2A
MDM4
SNAP25
KIAA0895
RPS27
RAB13
HLTF
ANLN
MARCHF8
IER5
KAT6A
P2RX6
EFCAB13
DARS1
ZNF391
MGA
MTF1
NFKB1
SEC22C
NKTR
PLD6
RAB4A
KATNA1
ARL4A
COX20
NABP1
HAT1
CEP85L
CBLL1
ACBD6
ANAPC10
ABCE1
DUSP12
BLOC1S6
RYBP
ZNRF2
MAP3K4
PRDX1
C1orf53
THNSL1
UTP11
TTC4
AGGF1
AARS2
ARMC1
THEM6
SKAP2
AREG
CHD1
PCIF1
DNAJB12
CSTF3
RPS24
POLR3A
METTL6
EAF1
NADK2
RDH14
POGLUT3
ZNF786
MAP7
MYLIP
PAXBP1
FAM133B
LSM8
COQ2
SELENOH
H3-3B
GHITM
DNAJC6
NAP1L1
SRSF10
C6orf89
CCNC
SLC39A3
PPIL1
TAF9
RAD17
AK6
BAG6
APOM
STAM2
DHX9
FUS
MVK
RIC8B
FANCC
CRKL
LYSMD3
GSTA4
ZFP1
ARID2
UBE2D3
NRF1
RAB37
STXBP3
ZBED9
TMEM168
COMMD3-BMI1
COMMD3
BMI1
SLC30A9
GLCCI1
CUL9
H2AX
USP17L22
USP17L20
DYNC1I2
AP1AR
FER
TMEM191C
APC
ARRDC3
SNAP29
PI4KA
CENPC
KLHL12
EXOG
ANKRD28
TNFRSF21
DNAJC10
JAGN1
BPNT2
SOD1
SERPINB9
TMEM18
PDXDC1
WDR74
RSPH3
TYW1
SBDS
SNAPC5
MTR
KTI12
TCF12
COPB1
RANBP2
ADNP
CETN3
SUPT3H
WASL
FRG1
RSPH14
RAB36
IQUB
MNS1
TOR1AIP2
TOR1AIP1
ZNHIT3
H3C10
MTX2
H2BC13
H2AC13
IFT57
SIRT5
YTHDC1
AP1S1
SPO11
RANBP3
TOMM20
ANGEL2
USP30
CCT2
TNPO3
PHF19
ELOVL1
BTBD8
TRIAP1
BRAF
ZKSCAN8
HDAC2
PNO1
BCAR3
UBP1
DUS4L-BCAP29
DUS4L
COG5
PPP1R8
MINDY3
COPG2
CSDE1
PHF3
PYURF
PIGY
HERC3
DCLRE1B
AP4B1
CCNA2
PDAP1
BUD31
ZFC3H1
THAP2
INKA2
DDX20
EIF1
UTP3
PPM1D
KIF15
KIAA1143
POLR3E
TP53BP2
IMMP2L
TAF7
RPAP2
GLMN
ITGAV
ZFP69
TRIM37
AHCTF1
AASDH
SREK1IP1
CWC27
TEX46
KDM1A
NR1D2
UAP1
PUS10
PEX13
MFAP3
FAM114A2
PRDX6
YIF1A
TMEM151A
RHBDD1
SS18
ZFAND5
SMIM10
HSPA1L
HSPA1A
POU2F1
C8orf37
GDI2
SVIP
RPLP1
TCERG1
EXOSC9
SMAD5
RPL22L1
ZNF669
RWDD3
CD33
PGRMC2
DNA2
SRSF4
FAM98B
ICE2
FBXW2
SPRTN
EXOC8
DYNC2I1
MPHOSPH6
MDN1
RUVBL1
SAR1B
NMNAT1
LZIC
ARHGEF10
TBC1D15
NSFL1C
EEFSEC
C8orf88
PDK1
HP1BP3
DCAF10
RPS3A
RRP15
NUP42
ZNF26
SUCO
GOLGA4
PDE7A
PRMT3
NGLY1
OXSM
ADO
TM9SF1
ANKRD36
UBE2L3
ERAP1
TRIM4
OLA1
ZNF558
OR2L13
OR2AJ1
SPOP
SCAF11
DMAP1
NDUFS7
ZYG11A
GTF3C4
DDX31
ZBTB37
NUP54
MRPL1
TRA2B
RIDA
POP1
MTERF1
TTC33
BICD1
SLC25A46
SSBP2
TCAF2
BAZ2B
PUM2
UBR4
SENP8
MYO9A
ARL6IP1
NBN
RINT1
MCCC1
KDM4D
CWC15
LPCAT4
UCP2
MBTPS1
RBPJ
KDM3A
ID1
SLC25A51
COA7
H2BU1
H2AW
PHAX
MTPN
LUZP6
SLC17A5
HNRNPH1
TK2
CKLF-CMTM1
CKLF
CBWD5
TSEN15
PET117
KAT14
MBNL1
HOMER1
NAMPT
ZNF862
FBXO30
TTC21B
N4BP2
GPR155
PBLD
HNRNPH3
MED23
SERBP1
EIF2B3
FANCL
MATN1
H3-3A
PBX3
SLC26A2
MAK16
FANCD2
SPTLC1
LYPLAL1
GGH
AFF4
PKP4
CCDC148
ANKRD36C
NUP35
ZBED8
FUT4
NRCAM
PSMD5
SARS1
IPO9
ACYP2
CENPE
ERI1
PARL
NDUFB2
ZC3HC1
CCDC88A
DDX50
E2F3
MARCHF4
DMTF1
GBE1
DEPDC7
GPR158
PON2
C22orf39
PPFIA4
MAD1L1
INO80
LDAH
AATF
WARS2
PSMA1
RPSA
ATP5MC3
H2BC15
H2AC15
BTG1
DTWD2
ANO6
ALDH9A1
PDLIM5
RPL10A
HBS1L
UBE2D2
TBRG4
WASHC5
NSMCE2
SLC24A1
INTS14
CHD2
EEF1A1
LRCH3
SPATC1L
DARS2
CENPL
PPIG
AK2
AGO3
ANKRD36B
TMEM185B
SERINC3
DENND1B
HMGB1
USPL1
TTC14
GTF2H2
SHOX2
RSRC1
TBC1D23
EXOSC3
UBR2
LCLAT1
KLHDC10
VWDE
BTBD10
UBR3
METTL5
THADA
KCTD16
SCGB1C2
RRP1B
HSF2BP
YIPF5
DDI2
SKP1
PSMG2
CEP76
TDRKH
ITSN1
CRYZL1
HSPA1B
STIL
ZNF280C
CYCS
EBNA1BP2
CFAP57
GOLIM4
CDK5RAP3
CLASP2
DYNC1LI1
TMEM184C
DNAJC1
ECI2
NPM1
ZNF165
RWDD1
FUT11
GNL2
EXD2
H4C3
H1-6
GPN2
FGGY
ZNF670
MCM6
FKBP9
EFR3A
NCKAP1
PHACTR2
MCRS1
RPP38
RAB33B
STX16
SLC35B4
PMS1
ORMDL1
COMMD8
GALK2
COPS2
PLS1
USP37
CNOT9
SLC35A3
MSH5
CLIC1
ZNF292
H3C13
H2BC18
DDX59
EFCAB2
DNAJC16
CASP9
PUM1
LARS2
ATG4C
FNIP1
OR4F4
RAD23B
IFRD1
CCNI
NDUFS3
KBTBD4
RABGEF1
KLHL20
DNAJC19
MRPL58
THUMPD3
SEC22B
BAIAP2
RSU1
PPIH
DPP8
TMED5
CCDC18
NUP205
MTMR2
NCDN
KIAA0319L
ALG9
SLC17A7
E2F7
PHTF1
XPO5
POLH
LTV1
TFB2M
CNST
ATP5MC2
IPO11
EIF2S1
ATP6V1D
C12orf73
P3H1
UBE2K
RBKS
BABAM2
DDX3X
AXDND1
ZSCAN25
RBM45
PDE11A
POLR2F
C22orf23
CRBN
HSF2
DGCR6L
ANKRD50
ZNF596
PTBP3
CCR4
ASAH1
LCA5
CLTCL1
BRIP1
GHSR
GGTLC2
CRB1
MMS22L
MRPS18B
OCIAD1
NSA2
GFM2
PPP1R11
SLC25A28
RBBP8
CHFR
CPPED1
WDR89
SP3
UCKL1
IPO13
ZNF397
ZNF57
RESP18
ZCWPW2
AZI2
NPL
LTF
TP53I3
CSRNP2
ALDH1A2
STYXL1
ELP6
TFRC
PSME3
EEA1
VPS26C
FANCI
TMED7-TICAM2
TMED7
IPO7
ATL2
CYP51A1
PPT1
STMP1
TENT2
PDIA4
PGGT1B
RIF1
RRM2B
PDSS2
STARD3NL
FIBCD1
PRKD3
CHPT1
CADPS2
CFAP299
KCNMB4
RNF182
ERCC6L2
MPC2
DCAF6
AP3B1
WDR13
MRM3
GLOD4
PAIP2
NCBP2AS2
NCBP2
TTC30A
SETD5
SS18L2
CSTF2T