ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3798680 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◣ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

GPAM
SSNA1
ANAPC2
SLC35E2A
MRPL55
NOC4L
DDX51
TBL3
POMZP3
MRM3
GLOD4
CWC25
SLC35E2B
HAUS5
ATXN1L
ACOX3
TRMT44
RBM42
PHF7
BAP1
LANCL2
RLF
FAF1
CCDC86
BRAF
FANCD2
TRIAP1
MAGOHB
MRPL21
IGHMBP2
RRM1
SRRD
HPS4
ADPGK
AP2B1
ABT1
LAMP1
C12orf73
PCID2
CUL4A
AASDH
MTHFSD
TMEM222
IPO11
RNASEH2A
PRDX2
PTOV1
SSU72
NUP214
FAM149B1
ECD
DUS1L
WASL
PPP2R3B
PPIL4
TOR1AIP2
TOR1AIP1
RAD54L2
COA8
BAG5
PSMB2
OXNAD1
DPH3
EIF2D
CCNL1
NDUFA10
OR6B2
TSPAN10
NPLOC4
SRSF11
LRRC40
POR
CNOT6
C8orf33
COMMD2
RNF166
CTU2
TATDN3
NSL1
ZNF721
PIGG
NUF2
C1D
SLC39A13
RMDN3
MAPKAPK5
TOP3B
FRA10AC1
GGCX
CIAO3
SEC13
NUP133
LSG1
NOP9
DHRS1
AKIRIN1
RPS6KB2
MRPL4
MED23
ZNF296
GEMIN7
NUP153
NOXA1
CNOT11
STX18
DCAF10
B4GALT7
PKN2
AMDHD2
MRPL58
VPS37B
GNB2
C16orf70
WASHC2C
TGM2
RBBP5
COMMD1
CCT4
OTUD7B
SLC15A4
DPY19L4
SPTLC1
PSTK
MRFAP1L1
STX16
NDUFS7
EPRS1
EIF5
USP15
LDAH
HEXA
SNAP47
JMJD4
MAGOH
ZER1
NOTCH2NLC
TACC1
SIVA1
PSMF1
THOC1
TRMT5
SLC38A6
GTPBP10
SNRPC
EED
MTF2
DENR
DCP1A
DNAJC19
MRPS24
ZNF593
C1orf232
SLC35A3
ACAD9
SENP5
NCAPH2
LMF2
KMT5B
LRRC57
HAUS2
PHIP
PRKDC
MCM4
TMEM41A
MAP2K2
PARK7
POLR1F
PEF1
TRMT61B
FBXL18
THUMPD1
WASHC5
NSMCE2
COPS8
DSTYK
SEC62
HMGB1
USPL1
CSNK1G2
DPP9
GTF2H3
EIF2B1
UCHL1
RBM18
MRRF
FAM131A
RRP1
UIMC1
AP5Z1
JOSD2
ASPDH
RANBP6
AVPI1
IQCH
AAGAB
FAM156A
FAM156B
COPS7B
TMEM183A
NR1H3
ACP2
AP3S2
TBC1D13
PEX3
ADAT2
UTP25
CCDC59
RANBP2
FAM227B
DTWD1
DOT1L
HAX1
DMAP1
RFX1
CELSR3
INTS12
GSTCD
USP14
RBM23
SLC24A1
INTS14
NOL10
SNAP29
PI4KA
NCOA5
PFAS
GIT2
ANKRD13A
ZSCAN22
STMN3
RTEL1
FAM98B
RNF7
TBC1D23
AURKAIP1
SPACA9
AK8
CBWD5
CBWD3
ZNF426
SLC39A3
SAR1B
NDC80
METTL4
GTF3C3
PRR3
GNL1
RCE1
CMTR1
SUPV3L1
SECISBP2
RBM15B
STYXL1
CTNNBL1
UBR4
RAD18
TTC4
NEURL4
MRPL39
BDP1
MNAT1
PEX10
CTNNB1
LMBR1
ACSF3
NCBP2AS2
NCBP2
POGZ
ZNF862
HDAC1
MYO9B
HAUS8
AAR2
BBS1
PURB
SKIV2L
NELFE
TSEN15
TAS1R1
NOL9
SNAPC5
NME1-NME2
NME1
FRAT1
DDX19A
C17orf75
CCDC88A
STPG3
NELFB
WFDC3
DNTTIP1
TOMM7
FOXJ3
TTC26
NOTCH2NLB
MKRN2OS
MKRN2
PSMB6
DHDDS
FKTN
STARD3NL
BTBD10
PSKH1
PRKAG2
PTEN
KLLN
ULK4
CCDC57
TRIP4
ANKRD40
SLC35F5
PBLD
HNRNPH3
MED9
TUBGCP6
TBC1D22A
EMC8
COX4I1
CBWD6
UBE2B
CDKL3
DCAF8
TEFM
HPS1
FAM228B
SF3B6
CENPW
GAS8
DBNDD1
CALM1
ITGB2
TACO1
MRPL16
TBC1D19
RRP1B
HSF2BP
SLC35E1
ZNHIT6
TUBGCP5
DDX1
DRG2
KDM4B
ARF3
CCDC124
KLHL12
ZFAND2A
MAD1L1
MARCHF7
RFXANK
BORCS8
CYCS
SELENOH
RUVBL1
EEFSEC
MRPS31
OPA1
COPB2
RPL6
PTPN11
DGCR6L
CENPE
PELP1
ZNF579
TPM4
DNAJB12
SSBP1
SYCE2
PMF1-BGLAP
PMF1
TRMT61A
USP30
TIMM23
TUT1
JOSD1
GTPBP1
NOTCH2
MAP3K7
TRAP1
GTF2H2C_2
GTF2H2
ELK4
EDC4
BIRC2
SPRYD4
CPPED1
ID2
GARS1
DNAJC9
ZMPSTE24
PDE4A
RABL2A
HUS1
BRF2
NUDT9
LMTK2
BCL6
TEX38
ATPAF1
WDR73
NMB
WASHC2A
ZNF367
ORMDL3
SLC31A1
FKBP15
WDR4
SLC19A2
BET1
STXBP4
COX11
MRPL40
HIRA
UFSP2
C4orf47
CDC73
RNF6
PHKB
ITFG1
ERLIN2
ZNF839
NOTCH2NLA
RNPS1
ZNF614
PPP5D1
CALM3
PLEKHM3
DHX40
ZZEF1
CYB5D2
RPL12
LRSAM1
GET4
OGDH
PIGK
ZFAND3
RTF2
XRN1
PGAP2
PFDN4
MICU2
USP36
FOS
EIF1
SUGCT
MPLKIP
DPH5
QTRT2
CCDC191
ZNF639
MECR
FEM1B
TMEM71
PHF20L1
TRAPPC2
OFD1
ZNF23
PHRF1
MRFAP1
TAB3
HOXD8
FAM207A
TPRN
TMEM203
NDOR1
ZNF300
SMG5
TMEM79
NPTN
ZC3H3
ATXN2L
WDR53
FBXO45
RMND5B
APTX
NME3
MRPS34
EME2
PPP5C
POLR3E
PARG
MPHOSPH10
MCEE
RNASEH1
MRPS18C
HELQ
NSA2
GFM2
RB1
CDADC1
GHITM
FRAT2
PBRM1
GNL3
MAN2C1
NDUFV1
PRKRIP1
RNH1
DOHH
CAAP1
PEX11G
COX6B1
ETV2
TMTC4
TTLL7
RPS16
NDUFA12
ZMYM3
METTL15
KIF18A
RRNAD1
ISG20L2
NKIRAS1
CLTC
WDR97
MAF1
NR1D2
LTV1
GTF2H2C
MRPL2
KLC4
PRPF3
SMU1
ATG16L1
AGK
CUL3
LOXL3
DOK1
TRIP10
GPR108
CHD2
ASXL1
CEP350
RTTN
TSN
ZC3HC1
CHMP1B
FBXW8
PAFAH2
USP9X
TPT1
SLC33A1
CRH
RFC5
TIA1
TBRG4
PINX1
MRPS17
TAF15
RBM22
TMEM260
COX18
ATG101
TAF9
RAD17
AK6
NPHP1
AKAP1
ATF7-NPFF
ATF7
DNMT1
TMEM242
AOPEP
WDHD1
SOCS4
METTL9
IDH3B
RAVER1
HEMK1
C3orf18
UHRF2
MAP2K1
MBLAC1
DUS4L-BCAP29
DUS4L
COG5
RFC1
UCHL3
COMMD6
UBR1
RAB28
MTIF2
NDUFC2-KCTD14
NDUFC2
WASF1
CDC40
PRKAR1B
KMT2D
ZNF391
PIK3R3
ID1
PMVK
SEPTIN11
CBWD2
NUP42
JARID2
SDHC
MPZ
RRP15
RPL37
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
MFN2
ENSA
ANKFY1
SLC35B4
IPO4
MAPK8IP3
TMEM147
CLASP2
SOD2
SCAMP5
DUS2
DDX28
WTAP
PARP2
CRLS1
ZNRD2
FAM89B
C7orf50
ATAD2
ATRIP
NFX1
HECA
GUK1
ARHGEF7
SYN1
CTDP1
RPS8
CHEK1
MRTFB
CDK5RAP1
KIF15
KIAA1143
MIA3
RNF103-CHMP3
RMND5A
RPL21
ATP6V0C
CLCN7
ZKSCAN8
THAP4
ATG4B
DIAPH1
CHERP
DDI2
TAGLN2
SKIL
PACRGL
MEIS1
RNF139
LRRC37A3
FBXW2
EFCAB2
VCPKMT
PHF23
DVL2
MEF2D
RPL27A
MAP3K13
FBXO34
KPTN
DDX60
HNRNPL
ANAPC11
ALYREF
SLC44A1
ZC3H18
NAGPA
COQ9
CIAPIN1
GLCE
PDCD6IP
SNF8
MTURN
PDE7A
GEMIN8
NDST2
NREP
ZNF770
MDP1
CHMP4A
LEO1
NSUN6
CDKN2AIPNL
DLD
PEPD
LONP1
CATSPERD
PARL
NELFA
UMPS
LIN54
CENPBD1
HNRNPA1L2
MZT2A
NECTIN3
SIGMAR1
SPAG4
SPATC1L
EDF1
HHIPL1
CCDC85C
STK38L
PSMG3
CCDC113
TVP23B
ELP1
ABITRAM
SENP1
PFKM
SLC25A3
ANKRD12
RPS19
PPP1R2
SART3
ISCU
HDAC6
YBEY
MCM3AP
OXR1
MCAT
CYP51A1
PPIG
FAM200A
EPS15
MATR3
EXOSC9
PYGO2
LOC101928120
CXorf38
NOP14
GRK4
ATG7
SIK1B
SIK1
TCF4
HPS3
BAZ1B
NDE1
MARF1
SUPT20H
C8orf37
TRMU
ADAR
PGBD4
EMC7
MRPL44
C11orf49
RBSN
TSEN2
CHUK
TSR3
GNPTG
POLG2
PSME3
DRAM2
CEPT1
PHF21A
RPS28
NDUFA7
TCTE3
ERMARD
TMEM230
TIMM10B
ARFIP2
DDX59
AP1G1
TRMT10C
PKNOX1
NDUFAF4
KLHL32
PRPF38B
SLC25A16
BCL3
ZNF335
COQ7
SUMF2
C6orf89
MRPL3
KIAA1109
LRRC59
PPIL1
GOLGA5
KPNB1
MFSD1
HEXD
LSM11
ATG16L2
ZDHHC4
PLPP5
ATAD3B
COX20
NCBP3
GALNT11
SCG2
ZBTB21
ZNF165
UBE4A
CHD1L
HECTD1
PRKAB2
PTPN4
CDC5L
FAM135A
DNAJC27
UBQLN1
NSFL1C
FMNL3
MAPK1IP1L
C21orf91
GOLGA1
SF3A3
EIF3B
POLG
TMEM181
TTLL5
ERG28
STOML1
PML
MAGEA2B
MAGEA2
IFRD1
ZNHIT2
FAU
RCOR3
FBXO4
CNNM3
KLC1
RHBDD3
EWSR1
XPNPEP3
ST13
SRPRA
SMAD3
BMS1
TMEM237
NTMT1
SRRM3
E4F1
RAD52
RHOU
CLPTM1L
AGA
PIGW
MYO19
SMN2
SMN1
PPP1CC
UBC
USP8
WDR7
RUSC2
MAP1LC3A
ITGB3BP
EFCAB7
ZNF26
ZNF76
ZCCHC9
TOB1
SMIM8
GMPPB
AMIGO3
CCDC77
IQCE
BRAT1
RNMT
FAM210A
EIF3D
KDM5A
ZNF576
IRGQ
ENDOV
ASPH
TFRC
CDK11B
ATP6V1FNB
ATP6V1F
NOL11
RABEP1
TOB2
NR6A1
RNF141
TMEM68
TGS1
RPL35
ARPC5L
PPIB
RAD23A
MAP4K1
EIF3K
PHB2
POT1
ZC3H6
MTLN
KCTD2
ATP5PD
SCFD1
RCBTB1
MAP3K7CL
CCT8
IFT172
ATXN2
C2orf49
PKIA
SRSF10
ETF1
SETD5
MYL12A
SDE2
NANOS3
STK19
DXO
MTMR14
DPY30
YIF1A
TMEM151A
ZNF653
ZBTB38
SKA3
MRPL57
NMNAT1
LZIC
CHGB
BCAR3
MED27
RIC8A
GPAT4
BET1L
PPP2R5A
EFCAB14
FOSL1
VAMP4
SLC30A1
SUB1
NRBF2
ACBD6
ZNF2
VGF
C9orf72
EEF1AKNMT
NDUFS5
ARHGEF12
SMIM10L1
PRH1-TAS2R14
IREB2
ZFC3H1
THAP2
REXO4
ADAMTS13
ANAPC5
KCTD5
SAR1A
ESYT2
PFDN2
NIT1
STMP1
YIPF6
POLR2J3
FSIP1
UBE2H
CDC25C
FAM53C
INO80D
RRAGC
GALE
BCAP29
FAM76A
MBTPS1
WDR27
C6orf120
AP5S1
MBTPS2
SYT14
RPS7
DNTTIP2
OSGEP
APEX1
HERPUD2
UTP15
ANKRA2
PPP4R3A
UBA1
SP2
SAP30BP
RECQL5
IVNS1ABP
STT3A
MPC1
SAMD11
YY1AP1
DAP3
LDHA
NUP155
ZNF581
ZNF580
FAM171A2
SMC4
IFT80
CBWD1