ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025672 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◣ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

MTRNR2L2
MSH3
DHFR
MTRNR2L8
PMF1-BGLAP
PMF1
GPAM
PEMT
NME1-NME2
NME1
DRG2
SNX25
CFAP97
MED9
SSNA1
ANAPC2
SLC35E2B
SLC35E2A
DUS1L
PHF7
BAP1
FAF1
NDUFS7
ZSWIM7
TTC19
C12orf73
LAMP1
ZNF296
GEMIN7
RRP1
PCBP1
AMDHD2
TRIAP1
MRPL21
IGHMBP2
CCDC86
NME2
HEXA
PKN2
WASHC2C
CIAO3
UTP25
TMEM222
POLR1F
GGCX
CNOT6
COPS3
COMMD1
CCT4
EPRS1
FLCN
GTF2H3
EIF2B1
AKAP10
RGPD2
RGPD1
WASHC2A
HAUS5
ZMPSTE24
SLC39A3
PMP22
ANKRD40
PCID2
CUL4A
ADORA2B
TBL3
GCN1
ITGB3BP
EFCAB7
GET4
SRRD
HPS4
DENR
PPP2R3B
TRMT61B
MAGOH
TVP23B
RBM42
SPRYD4
ABT1
ADPGK
ARSG
SLC16A6
RBBP5
EIF2D
JOSD2
ASPDH
LSM12
G6PC3
RLF
ATXN1L
RASD1
PIGL
NCOR1
FBXW8
FRA10AC1
COL23A1
CCNL1
RNF166
CTU2
PRKAR1B
EED
MARCHF8
TACO1
MPRIP
MPHOSPH10
MCEE
GARS1
SEC31A
DPH5
THAP9
C8orf33
LANCL2
MRPL15
BAX
RAD54L2
CWC25
RPS16
OTUD7B
MRPL44
CENPV
NOXA1
LRRC37A3
SNRPD1
MTF2
NT5M
FAM227B
DTWD1
PURB
B4GALT7
GID4
ATPAF2
MANBAL
DHX33
ACSF3
SLC39A4
CPSF1
GPSM3
CLN6
SF3A3
IARS1
RANBP2
NDUFA10
OR6B2
LRRC59
TOP3B
ZSWIM4
NOP9
DHRS1
PLEKHM3
MDN1
TTC4
ZNF770
DPY19L4
GTF2H2C_2
AKIRIN1
GTF2H2C
PARG
NUP54
MRPL16
COX10
TVP23C
PLD6
DNAJC9
C2CD2
MTHFSD
PEX3
ADAT2
FKTN
GLRX5
CCDC57
GNPDA1
TMEM41A
NUF2
TSR3
GNPTG
YBX1
RPL6
PTPN11
BTBD10
MAGOHB
MRPL3
SUPV3L1
AHCY
DDX1
UBB
HS3ST3B1
C1orf74
MRPS18C
HELQ
ZSCAN22
SLC31A1
FKBP15
NMNAT1
LZIC
CYCS
PMS2
AIMP2
TBC1D13
SRM
DCAF8
SLC25A33
PSMF1
UTP4
DERPC
CHTF8
POR
UBA1
DGKZ
MYO9B
HAUS8
PINX1
TRIP4
RAD50
CAD
SEC13
NFAT5
NFE2L2
DDX5
DUS2
DDX28
CRLS1
MED23
CCDC59
INTS12
GSTCD
SUMF2
NOTCH2NLC
MKRN2OS
MKRN2
SLC39A13
GTF2H2
AP3S2
PGAM5
ZNF84
FAM98B
NUDT9
MRPL55
MRPL4
TEX38
ATPAF1
SSU72
PTOV1
SACM1L
CACUL1
ERLIN2
COA8
BAG5
STK10
LSG1
C10orf95
CLCN7
SAR1B
PARK7
TFDP1
YAE1
WDHD1
SOCS4
NOTCH2NLB
PEBP1
SAMD13
NOC4L
DDX51
TBL1XR1
CALM1
TATDN3
NSL1
GOSR2
GPHN
SH3GL1
CHAF1A
DCP1A
TIMM23
DRAM2
CEPT1
HNRNPU
FAM156A
FAM156B
NEURL4
PSMG3
SLC25A40
DBF4
TEX261
SMYD4
RPA1
CYREN
AP5Z1
SPATC1L
CYP20A1
TRIP13
BRD9
NCBP3
CSNK1G2
TRIM25
TAF4B
ZFAND3
ZNF639
ZNF286A
LRRC58
PBK
DNAJC11
PPRC1
USP15
OAZ3
MRPL9
VSIG10
PDS5A
STXBP4
COX11
USP32
EIF3B
VPS37B
KMT2D
ATRIP
DHX40
ZNF800
NBPF1
ETV3
SLC9B1
MAP3K7CL
CCT8
FUS
INTS13
FGFR1OP2
XYLB
RPL10A
MAP4K5
ATL1
SPRTN
EXOC8
PHF12
SRSF10
N6AMT1
DNAJA3
ANKRD26
RAB35
NBEAL2
CCDC12
ADI1
SUGP2
ARMC6
LUC7L2
SMARCA4
VDAC3
XRCC5
MLST8
POU2F1
STK32C
LRRC27
C10orf88
FAM222B
BANP
TUBD1
RPS6KB1
PDRG1
PRRT2
FAM220A
PAGR1
MVP
KHDRBS1
PRMT2
ENTPD6
POLA2
SDHA
CCDC127
APOLD1
CXorf38
RAD21
FAM98A
RANBP3
ACTN4
BNIP3
LONP1
CATSPERD
SNAP47
JMJD4
FAM122A
SAYSD1
VPS26B
NCAPD3
XPO5
POLH
ZC3H8
FAM200B
SYNGR4
TOLLIP
MCRS1
CENPBD1
PTPN4
NPRL3
PPP6R1
ATP6V0E2
SAMHD1
ITPA
DDRGK1
MAP2K2
THAP7
RPP38
GTF3A
ZBTB17
ABCF3
DAGLB
EHMT1
RABIF
FAM24B
MAN1B1
ABCA3
HNRNPH1
CHMP7
FMC1-LUC7L2
FMC1
MRPL54
APBA3
TK2
CKLF-CMTM1
CKLF
SPPL2B
LSM7
CBX5
RAB18
EID2B
MYPOP
ZNF12
WIPI2
HNRNPA1
HNRNPL
FAM71E1
EMC10
PRR30
PREB
NAGK
TMEM250
NDEL1
MIS18A
IFNAR1
TMEM209
SSMEM1
NANP
SH3YL1
ACP1
XRCC2
PBLD
HNRNPH3
SMIM11B
SMIM11A
HASPIN
ALKBH5
LOC100287896
LIPT2
SLC2A11
KDM8
TRIM37
AKAP1
PITPNB
CRTC1
PATL1
ERCC6L2
RCBTB2
CBY3
SOD2
PPP1CB
NOB1
MAP2K7
CDC7
PPP2CA
YEATS4
FADD
CDC5L
TMED4
NPM1
MOK
SELENOI
ADGRF3
SLX4
MRPL45
WDR4
STYXL1
NELFCD
CACYBP
LOC100289561
CCNT2
SPDL1
HINT1
HSD17B8
TMEM141
CCDC183
SLC25A11
RNF167
SEC22C
PTK2
RPL36
CHD1
MTRNR2L1
SKA3
MRPL57
OPA1
ZNF576
IRGQ
SRSF1
SAFB2
SAFB
OARD1
NFYA
SLC39A7
RXRB
NOP14
GRK4
MTCH2
USP21
MARCHF7
SRCAP
LOC730183
TIPIN
C6orf89
PUF60
RBM17
TRMO
BRICD5
ASNSD1
ASDURF
TXNL1
RTL10
GNB1L
SNRNP70
ZZZ3
TMEM18
UNG
ALKBH2
POLR2J3
NPAS4
FUT8
RPL12
LRSAM1
FAM120B
NUP107
SMG9
COPB2
VPS13A
RSRP1
THOP1
SGTA
AMZ2
TUBGCP5
NUP214
XPC
LSM3
ZNF583
CCT5
ATPSCKMT
TAS1R1
NOL9
PRDX1
NUP50
COQ9
CIAPIN1
HP1BP3
RPS19
MPC2
DCAF6
MRPL24
MAD1L1
MSL2
NCAPG
SPOP
RALGAPB
DHDDS
QRICH1
TOMM20
RAD23A
PPP4R3B
SMG5
GMCL1
NCOA4
ANKFY1
CDK12
CCNC
TOR1AIP2
TOR1AIP1
RPS11
ARF3
OSCAR
NDUFA3
RPS7
C5orf24
RPS6
TDP2
ACOT13
GRB2
MLX
COASY
THOC3
SLC15A4
LRFN3
SCAMP5
GH1
NAA35
THAP5
DNAJB9
TMEM79
TAOK1
TBC1D5
DPF2
EEF1AKMT1
ECHS1
ASXL1
PSMD5
POP7
TMCO1
FBXO31
UHRF2
SARS1
SUPT5H
RPL17-C18orf32
RPL17
CCNQ
SRRM1
INTS7
DTL
TMEM139
CASP2
ERGIC2
CRB1
DYNC2I1
WDR73
NMB
ZFP91
LPXN
GPBP1
TAX1BP3
EMC6
NOL11
PPME1
C2CD3
AKAP11
POM121
BLOC1S4
SLC26A8
MAPK14
ACAT2
GDF5
CEP250
ZBTB2
TTC32
CAPZA2
AP3B1
GPATCH3
SMIM14
MAK16
RFC5
NAA38
ARFGAP3
COP1
CAND1
UBR3
RPS28
NDUFA7
METTL5
LTV1
RBAK-RBAKDN
RBAK
AURKAIP1
TOPORS
SMIM27
NAPG
SNX5
MGME1
TIGD1
EIF4E2
FAM135A
TMEM88
CYB5D1
MRS2
PURA
C6orf136
FSIP1
IPMK
CISD1
GID8
DIDO1
KAZALD1
DNAJC27
ATF2
SMIM10L1
PRH1-TAS2R14
GAS8
DBNDD1
FBRS
VMAC
NKTR
NDUFA11
PDXDC1
UBE2D3
MAP1LC3B
DBR1
DARS1
WDR13
DYRK1B
MRM3
GLOD4
RNF149
HSPA4
ETFA
CEP350
AHCTF1
STRIP1
CFAP70
EHD1
IREB2
TMEM70
ELOC
NDUFA8
MORN5
U2AF2
USP10
CDC34
SHBG
FXR2
STS
PUDP
MMS22L
XPO7
TTC23
LRRC28
PAPSS1
SMARCC1
UBE2M
CHMP2A
SPEGNB
GMPPA
SCAF11
POLDIP3
RAB33B
ZMYM4
SIRT5
PALB2
HSF1
DCTN5
BOP1
EPS15L1
C8orf48
EIF4A3
SRD5A1
USO1
PSMB2
HERC1
PRELID3B
MATR3
HINFP
EIF5
UROS
BCCIP
RBM15
ICMT
ZNF638
NOP16
HIGD2A
RSL1D1
MINK1
SHPRH
ZNF664-RFLNA
ZNF664
CCDC92
CC2D1A
C19orf57
WDR18
EIF5A
MAPKAPK5
KIFAP3
ESRRA
CATSPERZ
TFB2M
CNST
TMEM104
NAT9
MTG1
ARPC2
SYS1
SRP19
AP2B1
MYL5
ATP5ME
FAM76A
KIAA1191
FASTKD2
ARL10
SUGP1
MAU2
MAP3K7
ZBTB45
SCAND1
RPL27A
ATAD3A
RPS15
HBS1L
SRRT
CSDE1
SEC62
EFHC1
NFYC
GZF1
AASDH
DFFB
CEP104
PRKDC
MCM4
UTP18
MBTD1
TMEM63B
MRPL14
VMP1
PTRH2
TIGD6
HMGXB3
MBTPS1
PXMP2
TMEM43
MICOS10-NBL1
MICOS10
CHCHD4
EID1
WDR43
CBWD5
KCNN1
GATD3B
GATD3A
HSBP1
SLC25A4
SEPTIN7
RCC1
NUP153
TMEM63A
MAPKAP1
TENT4A
MORF4L1
MED1
NUDCD2
HMMR
TIA1
CNP
PRDM4
MRPS7
GGA3
DSN1
RPL8
CUL3
CCDC93
PUM2
MKNK2
RPL7A
MED22
ADAT1
ZCCHC14
MRNIP
RNF151
SF1
WRNIP1
CDC20
C15orf40
ATF7-NPFF
ATF7
DHX37
BRI3BP
CD2AP
DLGAP4
CELSR3
NBPF3
TMX1
ZNF346
KIF5A
DCTN2
POLR2J
ALG8
GOLGA1
RFX1
NR1D1
SMG7
POLE
THAP1
FIP1L1
WDR27
C6orf120
THADA
GLCE
KIN
ATP5F1C
SPAG16
IKZF5
ACADSB
WWOX
PPM1G
DNTTIP2
POLR2J2
SLC12A2
APTX
ARHGAP35
ZNF317
RBPJ
RPS29
RC3H2
KDM3A
C8orf37
TSEN2
B9D1
SBNO1
YIPF3
POLR1C
PIAS4
ING1
GRWD1
MRTFB
CPLANE2
NAT10
WDR77
ATP5PB
CBWD3
PTBP1
RNF130
PHF23
TGOLN2
ENDOV
USP54
RBM26
CAPN7
LINS1
ASB7
ZNF248
CHUK
PCGF1
LBX2
ZFC3H1
THAP2
AMACR
GOLGA8B
ATP5MC2
CFAP410
HSPH1
SRSF11
SMARCA5
RNF32
RBM18
MRRF
MBD1
PFKFB4
STX16
MICU2
UIMC1
RNPC3
CBARP
ATP5F1D
E2F6
CD320
CCDC77
AGBL3
NRBF2
CLPTM1L
RAD23B
ZBTB14
TRAPPC2
OFD1
ANKRD13C
RPRD2
TSSC4
PGRMC2
EIF2S2
PAXBP1
ANO10
ABHD5
KIF22
ACTRT3
TMEM127
CIAO1
UPF1
NSUN3
DHFR2
DNAJB4
CNOT4
GDI2
TSACC
CCT3
MTHFD1
NAPB
IMP3
DUX4
CCNT1
SNRPC
WWP1
CBWD6
ASH2L
DNMT1
SIPA1L1
EXOSC10
XKR7
FANCD2
DHX9
C1orf53
POFUT2
INO80C
ATP5PO
IPO11
AGA