ChIP-Atlas: Target genes

Potential target genes for HOXA3

Query protein: HOXA3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478484 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXA3's Target genes

◢ HOXA3: Average

◢ SRX10478483: Hep G2

◣ SRX10478484: Hep G2

◢ HOXA3: STRING

NPAS4
DHX36
UBA52
AP2B1
PRPF38A
ORC1
XKR7
NOC4L
DDX51
CCDC86
TBL3
CWC25
MVK
RNF166
CTU2
RRM1
CAMLG
HINT3
ENOSF1
STK38L
RANBP2
BRAF
IQSEC3
PDE4A
KAT7
RRNAD1
ISG20L2
TOR1A
NUP153
NBEAL1
HOMER1
SSU72
APTX
LEMD2
MTURN
CSTF1
AURKA
PEF1
POT1
USP36
MRM3
GLOD4
RALGAPA1
METTL3
VPS37B
ESYT2
SPTY2D1
ZBTB21
GALNT11
ZNF593
C1orf232
PRMT9
AIG1
JOSD1
S100A13
CHTOP
ELL2
HIRIP3
RBM18
MRRF
PTBP1
ZSWIM7
TTC19
OXSR1
ZNF547
TRAPPC2B
INSM2
MORF4L1
CDK11B
FANCD2
BLOC1S5
ILRUN
STX4
DDX19A
SHLD1
TVP23B
HES4
TMEM91
B9D2
ELOVL5
OGDH
COQ7
SZRD1
MRPL55
HTR5A
RBKS
BABAM2
SF3A1
CCDC157
PPIG
RNF139
XRCC6
DESI1
TRIAP1
TM9SF4
ZZEF1
CYB5D2
CCDC174
COPS8
JOSD2
STK19
DXO
MORN4
ING4
RPA2
KIF15
KIAA1143
NARS1
C9orf72
PRR14
RCE1
ATP9B
SCYL3
HAUS5
ZNF268
UBR4
ZNF548
SSNA1
ANAPC2
PRKCSH
CCDC151
MAGOHB
H2BC15
H2AC15
ZNF721
PIGG
GUK1
RIF1
SEC23B
COX18
C1orf174
MAP3K13
HECA
CDC5L
VPS35L
ADGRG3
NUDT18
CSNK1G2
RAB37
PAK1
RPS27
FAM177A1
RFX1
ST7L
CAPZA1
PDE7A
PRORP
PPP2R3C
AP5S1
GZF1
ATF1
TMEM259
SEPTIN7
MFF
POLR1H
JARID2
ZBTB40
TMUB2
CATSPERG
THAP4
ATG4B
RTF2
VPS16
PCED1A
IDH3B
SLC30A9
MAGOH
TRMT61B
COX8A
IWS1
MMADHC
GHITM
RANBP6
HACD2
ZNF747
TRMO
CRADD
PREPL
CAMKMT
ZBTB11
ANAPC10
ABCE1
CCDC59
AP1G1
PSTK
TPGS1
ZC3H6
SRRD
HPS4
ZNF764
MAP3K2
PSMB5
THUMPD1
TSSC4
OPA3
RFC1
CSDE1
DDX18
RPL12
LRSAM1
CLK1
PCNX4
TBC1D17
AKT1S1
TXNDC15
IMP4
CCDC115
RPL21
C16orf91
YTHDC2
TTLL11
CCDC124
NAF1
FEM1A
CCNL1
KAT8
GTF3C3
XPO6
TFCP2
ZNF426
CDK11A
RLF
TRMT10C
WARS2
SPAG4
PARP2
SNRPD1
MRPL21
IGHMBP2
NECAP1
WFDC3
DNTTIP1
PSMF1
YTHDC1
HAT1
KDM3A
STX16
LRRC59
AFTPH
EFCAB2
BNIP1
CCNT1
SLC39A9
ERH
SDF4
B3GALT6
NOP58
ZNF507
NSFL1C
TPT1
GLRA1
SRSF5
E4F1
MCMBP
SAR1B
ACTR5
SKIV2L
NELFE
NOLC1
RAD23A
GTF3C6
SF3B5
NHLRC1
BIRC2
SSR4
IDH3G
PPIL4
SELENOK
ECH1
IPPK
FAM200A
KIFC1
LDAH
TBCCD1
DNAJB11
CYCS
SIK1B
SIK1
ZGRF1
LARP7
USP31
NUP35
GTF2H3
EIF2B1
SLC25A3
C2CD5
CHGB
MTF2
RPF2
MRPL44
NUP214
DUS3L
ARMC5
ZDHHC7
NOP9
DHRS1
CELSR3
LRP2BP
ANKRD37
NDUFS5
NDC80
METTL4
DYNC2I2
TUBGCP6
TSSK6
NDUFA13
L1CAM
ADK
PSMD8
SCLT1
C4orf33
HOOK2
RNF40
CCDC189
MZF1
MIA2
RMDN3
SCAF8
CPLX2
TEAD1
STX18
TOR1AIP1
WDR33
PPP2CA
NUP133
MFSD13A
EIF4A1
BDP1
KNL1
NDUFS7
TRIP4
THAP9
SEC31A
SNAP25
THOC1
PELP1
RBM25
ENSA
GART
ANKRD13C
RAB11B
TMEM230
EMD
LRRC37A3
ZNRD2
IMMP1L
ELP4
SPRYD4
TRIM52
LUC7L3
DNTTIP2
N4BP1
SNRPC
TSPAN31
CCNH
LYRM1
DCUN1D3
CDK5RAP2
CUEDC2
TMEM101
PRRC2C
KPNA5
SLC35F5
ESCO1
SLMAP
KMT2E
NCOA5
MDC1
CNNM2
PRPF38B
LSG1
CACYBP
CTNNB1
AARS2
PEX12
RPL24
TBP
PSMB1
ATP1B3
DDX1
TTC17
NAA60
ARIH1
LOXL3
DOK1
RBM42
FBXL19
DUS2
DDX28
RBM12
CPNE1
POMZP3
USE1
ARG2
COMMD1
CCT4
FAM149B1
ECD
ZNF337
PHF20
DUS1L
SNRPB2
KPTN
BAX
DDX42
CCDC47
DHDDS
NME1-NME2
NME1
COX7A2
ABT1
ZNF76
NKIRAS2
DNAJC7
RPS6KB2
LRRC57
HAUS2
NDUFA10
NDUFB5
MRPL47
TVP23C
HPS5
GTF2H1
MRPL4
C1D
SLX4IP
MIGA1
FRA10AC1
SARAF
NR3C1
PPP1R15B
OXA1L
TMEM131
NDUFAF5
ESF1
TRMT44
ACOX3
INO80B
PAGR1
YTHDF3
LONP1
CATSPERD
RAF1
BTBD9
ATP6V0A1
PSKH1
FBXO34
TOMM6
BCAS2
AASDH
RPL9
LIAS
SCFD1
ZNF23
ZNF501
MAP1LC3B
FBXO31
WDR7
NTSR2
GARS1
VCPKMT
MDP1
EXD2
SRSF11
LRRC40
ZNF2
HEXIM2
ZNF410
NDUFS2
ZNF165
EPHA10
UBE2J2
RPL23
SETD4
DPAGT1
RNF44
SNU13
PURB
PGS1
R3HDM2
ATP5MC1
SMG5
PTPN4
TBC1D15
NUS1
CPPED1
TUFM
SH2B1
ARPP19
SRSF3
SCRT1
RACGAP1
TTI1
RPRD1B
INTS12
GSTCD
AHCYL1
CREM
UBE2V2
GTPBP10
RABGGTA
NELFA
STRAP
TAB2
CIPC
PTRHD1
CENPO
RRP1B
HSF2BP
PPP1R21
NDUFB6
WDR36
TRA2B
MRPS10
ANGEL2
CLTC
EAPP
RALGAPB
HTATSF1
SMPD4
MZT2B
OTUD6B
STARD3NL
ZNF606
CLASP2
ERCC5
ZNF614
YWHAE
CPEB4
SNX5
MGME1
ATAD3B
SETD3
CCNK
RPRD1A
NRF1
CCDC88A
SMC3
WSB1
PABPN1
MRPL2
KLC4
LRRC8A
KYAT1
MBD4
IFT122
SECISBP2
PINX1
MRPL20
TRMT5
SLC38A6
NCAPH2
LMF2
BMS1
CBWD2
TRAK2
STRADB
DCTN4
PCBP1
FDXACB1
C11orf1
STRIP1
RNMT
FAM210A
ZDHHC3
EXOSC7
RARA
NEK1
NFX1
WRAP53
TP53
TATDN3
NSL1
ADNP
TCTE3
ERMARD
PIGU
C12orf66
ZC3H11A
LSM5
PEX3
ADAT2
SPG11
GOLPH3
CFAP20
PPP2R3B
CENPW
AAR2
RPS11
NDUFA12
N4BP2L2
SRCAP
LOC730183
ACTR3
MAPK8IP3
CKS2
CYSTM1
MTHFSD
TDRD7
UQCRQ
GDF9
NOL7
CDK5RAP1
DLD
UFC1
MRPL3
USP7
ADPRS
DUSP3
ERLIN2
ARFGEF2
CCDC150
H4C12
STK25
PCIF1
POLR1F
MRPS35
CBWD1
DCP1A
ATG16L1
MANF
PRPF6
SF3B6
FAM228B
ZNF274
ZFX
PGAP2
ZNF264
INTS8
TTC1
CMSS1
FBXO38
PRPF8
GOSR1
IPO11
RNPS1
ATRN
RBSN
THADA
HNRNPUL1
DHX40
FCF1
AREL1
TMEM237
CCAR2
MFN2
MRPS18C
HELQ
TACO1
MRPL58
NSUN4
ADPGK
RANBP3
SIRT2
NFKBIB
LCLAT1
FOXJ3
DRG2
ACAD9
GTF3C2
ABCC10
BCL2L13
MAP2K1
USF1
TSEN15
SLC17A5
USPL1
HMGB1
NDUFAB1
RPS7
CELF1
CDIP1
BBS1
WDR75
THAP6
ATF6
ZC3H4
OST4
TPD52L2
TMEM242
CDC14B
ZNF384
CEBPZ
CMTR1
GPSM3
RCAN1
ZNF891
ZNF10
CHCHD5
EFTUD2
CCDC103
MRPL53
RPL27
NGDN
RPL31
OXNAD1
DPH3
NUF2
IFT172
SF3A3
RBBP6
UBAP2L
C1orf43
PFAS
FAU
C5orf15
RPL13A
HDAC4
TANGO6
NBR1
NUDT3
SFPQ
MKS1
CCDC107
MTG1
EXOSC9
OPA1
GID8
DIDO1
RAB5A
EFHB
SRRM1
PCID2
CUL4A
ELOB
SEC23A
TRMT12
METTL9
MED20
BYSL
CTCF
SNRPB
TMEM203
NDOR1
WDR74
AKAP9
GPR137
ALKBH2
BARHL1
ASPSCR1
ANKRD17
DIABLO
COQ5
SASS6
RAB22A
FARSA
ABHD12
MDN1
EIF1B
PET117
KAT14
BIRC6
MRPL52
MED25
KNOP1
CASC3
SPTLC1
ATAD3A
ATXN1L
RHOT2
EIF3E
SPHK2
BRCA1
XRN2
RAD54L2
TBC1D32
PLEKHM3
WTAP
SOD2
TBC1D13
ZSCAN30
RPS28
NDUFA7
SEC13
COPS7B
C2orf49
SCRT2
THAP1
NUCKS1
CCDC186
MPDU1
LOC100996842
STAT3
CDADC1
AP3D1
WDR53
FBXO45
PCNP
NDUFV1
TIGD1
EIF4E2
ARF4
MED23
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ZNF780A
ZNF484
H4C4
LMLN
IQCG
MICU2
TMEM170B
MTIF2
SSBP1
ZCCHC9
MTLN
RRP1
TINF2
TBRG4
MIOS
MCM10
PGBD4
EMC7
RAB5IF
UBAP1
PHF3
TIMM10B
ARFIP2
BPTF
FAM122C
CWC22
NAPEPLD
LTV1
TMEM198
CHPF
SRPRA
PARL
HIPK1
FASTKD1
COQ9
CIAPIN1
MANBAL
EIF4G2
HERPUD1
DDX46
UFD1
CDC45
TJAP1
CHFR
LSM2
SLC25A21
COMMD2
GAR1
TRAF4
FAM227B
DTWD1
TMEM217
TBC1D22B
SOCS5
OGDHL
NCBP3
ZNF524
FIZ1
B4GALT3
VPS29
RAD9B
KCNK12
PPWD1
CENPK
RFC3
NRBF2
ZNF562
DUS4L-BCAP29
DUS4L
COG5
AGPS
RHBDD1
NCBP2AS2
NCBP2
TFPT
PRPF31
MRPS33
UTP15
ANKRA2
RPS14
ICE2
NAT10
U2SURP
DHX15
TPM4
MRPL39
MNAT1
MMUT
CENPQ
VPS33A
DNAJC11
PRSS27
RFC2
NOL10
MRFAP1L1
SEC62
MED27
DCAF10
SNX13
KIAA0895L
USP6NL
ATP6V0C
PSMB2
FAM131A
NFYC
C12orf73
ITSN2
TAF11
ALKBH3
LAMTOR5
UBE2H
NOP53
IPO4
PRMT5
RPS13
CAAP1
RPP14
HTD2
ZNF26
CLUAP1
USP14
SREK1
TP53BP1
AHI1
TMEM208
LRRC29
CLN5
ZNF394
YIPF6
POLR3D
YY1
SERINC3
ZSCAN9
PIK3R4
AATF
ARF1
SGTA
IMPDH2
CSNK2A1
SLC25A51
TPGS2
SMIM10L1
PRH1-TAS2R14
SOS1
BCKDK
ACSF3
ZBED5
OSBPL11
NDUFS3
KBTBD4
IBA57
KATNA1
MRFAP1
EXOSC6
RPL18
GOT2
ZSCAN12
ANAPC11
ALYREF
MFSD14A
ABCA3
ZNF300
RPS20
C17orf75
DENND4A
MTRNR2L2
CBWD5
CBWD3
LEMD3
CRNKL1
CFAP61
NSUN5
WDHD1
SOCS4
TOMM22
TTC16
PTRH1
PSME3
CBWD6
ETF1
ZBTB4
POLR2A
TSN
COMT
PAF1
MFSD14B
IST1
POLR2C
COMMD9
SLC9B1
ZBTB17
SF1
PPP4R3B
FBXL18
NR1H2
WDR48
SCN11A
SLC24A1
INTS14
TRIM39
MED9
BTF3
CHD8
NUMA1