ChIP-Atlas: Target genes

Potential target genes for NKX3-1

Query protein: NKX3-1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478563 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
NKX3-1's Target genes

◢ NKX31: Average

◣ SRX10478563: Hep G2

◢ SRX10478564: Hep G2

◢ SRX062357: LNCAP

◢ SRX062359: LNCAP

◢ SRX180379: LNCAP

◢ NKX31: STRING

NPAS4
XKR7
IQSEC3
LIN28A
FAM24A
INSM2
CELSR3
KCNH7
NKX1-1
HTR5A
GLRA1
RAB37
SMIM17
MTRNR2L2
MSH3
DHFR
EPHA10
L1CAM
DLGAP3
MTRNR2L1
CPLX2
MTRNR2L8
BARHL1
SST
CHGB
RTBDN
MAST1
SCRT1
DGAT1
ZC3H18
DUX4
SNAP25
MYT1
GDAP1L1
SLC12A5
NPPB
BPIFA3
HS3ST2
FRG2C
MAPK8IP2
ANK1
SIGLEC10
RANBP3
TMEM181
PTPRN
CADM3
SCGN
LHFPL5
CLPS
SLC39A3
CHRNB2
UBE2Q1
SEZ6
ICMT
HES3
ZNF23
CA4
DNAJC6
PGBD5
EAPP
KCNK12
PPP2R2C
HPCA
CCDC92B
NTSR2
LPIN1
CHRM4
CABP7
UNC80
CCDC200
OGDHL
AP3B2
SPOP
RBM28
ZFR2
ATCAY
NRSN1
CHGA
PTPRS
CDK5R2
CYP4F3
SRRM3
ZFYVE27
SCAMP5
GRM1
PIK3R3
GPR78
RNF130
KLF11
GCFC2
VWC2L
RPF1
MMP24
PLEKHM3
SCRT2
CEMIP
VGF
MLN
PDE1C
PRMT8
CDIP1
LOC102724770
DGCR6
PTMA
HMGA1
SEZ6L2
ASPHD1
PCDH8
ST8SIA3
SLC7A6OS
PRMT7
PMS2
AIMP2
UGT1A1
KCNH6
HHATL
HTR1A
TMEM179
PPFIA3
C19orf73
STMN3
RTEL1
SCG3
STAT1
CDC16
LEMD3
PDE4C
CCZ1B
MFF
JPH3
POU4F3
LSM12
G6PC3
RAP1GAP
ZNFX1
PTPRH
KATNA1
GTF3C3
C2orf66
ZSWIM1
SPATA25
NEURL2
CTSA
SLC18A3
CHAT
CTNNA2
JPH4
RIPPLY2
CYB5R4
S100A8
S100A7A
LOC112694756
NEUROD1
SLC25A21
GPR6
LHX5
KCNAB2
MARCHF4
USP30
SVOP
TMEM230
PCNA
CDS2
DLL3
KDM3A
GOLM1
HDAC2
TAF12
NME1-NME2
NME1
NDUFAF1
PET117
KAT14
CENPA
PTDSS1
MTERF3
INTS5
GANAB
THAP7
P2RX6
SNTG1
HEATR5A
SNRPB2
QTRT1
RFC1
H4C12
H2BC15
H2AC15
H4C11
SULT4A1
CRH
PAX5
SRSF2
MFSD11
GPR158
RESP18
SAYSD1
NPDC1
ENTPD2
MNAT1
EPM2A
AATF
INA
TMEM242
E2F6
FBXL16
TC2N
SHOX2
SNRPB
N6AMT1
NMS
TMEM107
GOLGA8A
PRDX1
DTD2
FGG
EVI5
DDX1
ELL2
UTP11
FHL3
SLC7A14
CPNE4
DNAJC11
LRIF1
GRIA2
TPH2
SCIMP
HDAC4
SPNS2
SPINK1
HEXD
HRH3
PSMD3
MRPL39
SIRT4
H4C3
H1-6
STK25
CDCA7
CCNC
KIF5C
ABCA3
SCFD1
PGF
MAT2A
DHDDS
ARFGAP3
WDR74
STX5
AKAIN1
BRSK2
PRMT5
TOMM22
RPL31
PAQR4
KREMEN2
POLR2J3
ZBTB4
SLC35G6
POLR2A
SPR
SRSF6
ADGRG6
IKZF3
ZPBP2
VPS29
RAD9B
SOD2
STAT3
WTAP
TOMM5
DNER
CTDSPL
FAAH
TCFL5
KRT39
THOP1
SGTA
C1QL2
H2BC14
H2AC14
IRF9
PMVK
TK2
CKLF-CMTM1
CKLF
GLS2
KCNB1
PCSK1
RNASEH1
UNC13A
XKR4
SLC6A5
FBXO41
EGR4
TIGD1
EIF4E2
PEX3
ADAT2
PDHB
INSR
ANKRD34C
SLC45A4
HES6
GTF3A
FEM1B
SLC37A4
WDR36
CSTF1
AURKA
ZNF513
SNX17
EIF2B4
TBC1D14
NUP54
CCDC88A
ABCD3
DHRS2
INTS12
GSTCD
PTPN6
C12orf57
USP48
TGM1
RABGGTA
TRIM67
NXF1
TTI2
ID2
SEC14L1
RARA
AKAP11
RRP1B
HSF2BP
PCBP3
RAD50
H1-2
NDUFAF5
ESF1
DRG2
TUBB3
MC1R
METTL15
KIF18A
EBPL
TMC7
CDK5RAP1
FMNL3
ANKRD36
TAB1
PRKDC
MCM4
CLUAP1
C16orf90
ARL6IP1
HBQ1
HBA2
HBA1
HCN2
TP53I3
SF3B6
FAM228B
ACTR3
SKOR1
GET4
KIAA0895L
EXOC3L1
E2F4
POLR3D
LCLAT1
STX16
MED23
ENPP3
OPRM1
AP3S2
CDH4
ZC3H7A
CPQ
EIF3B
NFASC
CTNNB1
TTC26
CACNG7
FRG2
GMEB2
GJA10
NSFL1C
SRP19
AARS2
GPSM1
CARD9
GINS1
WDR45B
CDH18
BSN
KANSL3
FER1L5
KIZ
ZNF473
VRK3
TINF2
GMPR2
GPRIN1
ACTL6B
SIT1
CCDC107
ARHGEF39
TEFM
RUNDC3A
SMPD3
TSFM
C14orf93
CNPY3
GGACT
GINS3
TSEN54
LLGL2
CASKIN2
HLTF
SMARCD2
RRBP1
BANF2
LMCD1
OPA3
SNRPD1
STX18
TMEM186
PMM2
INPP1
FAM237A
RPL27
IFI35
SPAG4
CERS6
RUSF1
PBX3
RAB11FIP4
BAIAP2
CLVS1
BRINP1
ASS1
MRPS15
HMGN3
DEFB132
PRLHR
NR1D1
FAM187A
EFTUD2
CCDC103
MAPK12
COG7
UGP2
UNG
WNK4
VPS25
ALKBH2
SEH1L
ACSL6
TNXB
FAM177A1
C4B_2
C4B
MLXIP
RPS6
HS6ST1
ZCCHC7
NOMO2
NOMO3
ABCC6
MEST
MTF2
TM9SF1
IPO4
POU2F2
POLE4
TBC1D13
LRRC37A3
ZNF165
OR1F12
CLN3
APOBR
ZSCAN12
SLBP
PHF20
TMEM129
TACC3
NSUN5
SAMD10
PRPF6
DGAT2
PSMD5
PTP4A2
SLC35A3
AXIN2
RIOK2
FN3K
EIF4A2
YTHDF1
RPS7
BMS1
FAM227B
DTWD1
TEX14
RAD51C
CPNE9
H3C3
H2BC3
PCSK9
ODC1
SDHD
NOP14
GRK4
GARS1
HSPA1B
NRL
CTXN2
SHISA7
PCK2
S100A7
MAMDC2
ZNF341
PXMP4
RSPH3
HHIPL1
CCDC85C
ITPRID2
NCBP3
RAB10
MRPL58
LRP2BP
TRPM8
ANKRD37
RPL10A
RNF103-CHMP3
RMND5A
ZNF783
NDUFAB1
TIA1
PCYOX1
ZBTB33
H3C4
LTV1
MED31
C17orf100
RBBP5
H4C4
H2BC6
REX1BD
DHX40
WDR35
NDUFAF3
IMPDH2
DALRD3
COG1
SAR1B
GRM2
GGA2
NUF2
TRIM44
COMMD1
PLA2G2A
CMIP
USP7
TP53RK
SLC13A3
FASTKD2
EZH1
AURKAIP1
SMIM12
CTF1
BCL7C
EPB41L4B
H3C12
H2BC17
H2AC17
MRPL21
IGHMBP2
STARD13
LRRC59
DHRS4
MFAP3L
F5
TNFAIP1
IFT20
KPNA2
CCDC65
TBC1D3H
TBC1D3G
LTB4R2
LTB4R
CIDEB
TBC1D3I
TBC1D3D
SLC25A10
MRPL12
CCL16
CCL14
MTIF2
TBC1D3J
NOS3
KCNH2
GRIN1
SNAP47
JMJD4
ELL
ZNF624
NUS1
MRPL3
LRP6
POLR3E
CCL20
HAL
USH1G
OTOP2
CMTR2
SPHK1
PSMF1
NCAN
DPP10
PGRMC2
R3HCC1
ANKRD40
DAGLA
BICDL1
NDUFS7
VARS2
GTF2H4
RHOB
PRR3
GNL1
DCLRE1B
AP4B1
KIF18B
TMEM268
FUS
NOC3L
LDAH
ZBTB22
TAPBP
SMIM40
DAXX
TBL3
RPS2
RNF151
NOXO1
OSBPL6
TAF6
MBLAC1
CNPY4
S1PR2
MRPL44
EBAG9
TRAPPC6B
PNN
TAF5
NEU1
LTN1
DLX2
SOGA3
PDCD2L
SRARP
SLC35G2
PDE11A
RBM45
MRPL45
RBL1
USP14
CALM1
TOB2
MAP1LC3B
FBXO31
GDF15
SYNJ1
ARL14EP
ATP5F1E
ITPA
DDRGK1
C6orf136
CEP295
KCNN4
HSP90AB1
TM2D1
SLC16A3
LANCL1
CPS1
RRN3
NOP9
DHRS1
SLC7A6
SLC34A1
TOMM34
STK4
TM9SF4
COPS7A
VPS16
PCED1A
G2E3
SLC43A3
FAM98B
ACAD9
ESYT3
AP1AR
PPY
NDUFB10
GLS
DLG2
CNTRL
C5
TOR1AIP2
TOR1AIP1
KCNH4
HCRT
DPYSL4
FAM163B
ACTA1
DRAM1
PEX5L
MIEN1
GRB7
CDH23
PSME3
BECN1
ZNF292
OR2B2
CITED2
MRPS10
AP5S1
SHF
CEACAM5
LONP1
CATSPERD
POLR2J
C8orf37
WWP2
NOB1
RGPD2
RGPD1
TBCD
TATDN3
NSL1
KCNC3
OSTM1
RPL13
RABGAP1L
RGS20
CCDC83
ADNP
UQCC2
IPO11
CYP21A2
POLDIP3
C9orf24
TRIM33
SLC25A36
MYORG
RPLP0
GCN1
RNF181
NANP
ATR
PPP1R11
RBM34
SCAND1
POLR1H
DIMT1
VAMP5
ANO10
ABHD5
SNF8
PTGES3
NHLRC1
POLR2C
LATS1
DHRS4L2
SNAI1
SNRNP200
CMTM3
FURIN
ISM1
TRMT2A
RANBP1
DIABLO
THUMPD2
DNAJB3
DUS2
DPEP2NB
DDX28
PNPT1
WASHC2C
TCTEX1D2
TNFRSF10D
ARHGAP1
NOL7
VMP1
PTRH2
E2F3
DCP1A
ZNF408
ABCB6
FABP1
FAM83D
SERPINA11
SH3YL1
ACP1
CCT4
EXOSC6
ATP2C2
UQCC3
UBXN1
LBHD1
CSKMT
C11orf98
MAP3K19
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
EIF2D
TMA16
WASHC1
SELENOV
APOB
MCM6
ZCCHC3
C20orf96
MOB4
ZNF581
ZNF580
ZNF598
NPW
WDR6
ACSL4
ZDHHC22
PSMD7
UCKL1
MARCHF11
H4C5
H2BC7
H2AC7
MRI1
C19orf53
HMBS
H2AX
DPAGT1
TPBGL
PLA2G10
NPIPA3
NPIPA2
TRADD
NOL3
HSF4
FBXL8
ARFGEF2
TRIP6
SRRT
FAM53C
CDC25C
STEAP1
SCN3B
GHSR
CSF3R
GATAD2A
H4C2
H3C2
H2AC4
SPG11
ZGPAT
ARFRP1
RAD9A
PPP1CA
CCDC117
NEPRO
PTCD3
POLR1A
DNMT3A
CARTPT
PIGL
NCOR1
C10orf88
VRK2
COL21A1
NUP62
IL4I1
ATF5
THAP11
TSG101
MLANA
NFE2L2
SSNA1
ANAPC2
HUS1
GPT2
RABL2B
TSSK4
GADD45B
NOMO1
SYNM
ITPR1
H3-3B
XKR9
LACTB2
H4C1
H3C1
H1-1
UNK
OSGEPL1
DMAP1
MAN2C1
SPTSSA
IPMK
CISD1
LMNB2
CARMIL3
TMEM106A
APOC3
APOA1
NBPF1
SAMD3
GRIK2
PLS1
SRP68
ZNF571
ZNF540
SMC3
TMEM200A
MRNIP
ZACN
GALR2
NDUFB3
FAM126B
NSA2
GFM2
HIBCH
PRR22
DUS3L
MEIG1
DCLRE1C
RPL29
CFAP65
SLC17A9
SGF29
AKR1A1
ABCF1
CCDC126
BOLA3
HBS1L
HERPUD1
UGT2B10
UTP14C
AKAP10
XYLB
KRI1
CDKN2D
CPPED1
USP42
CACNG3
ZNF148
SHH
SCAPER
FAM133B
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
FDXR
TSEN15
AGGF1
UBL7
TOM1
BCL7B
PTH
NEK2
BRMS1L
EFCAB13
SLC39A4
CPSF1
STK19
LOC110384692
DXO
C4A
DNAH14
KNOP1
IQCK
MST1
TREH
TRIM25
ZMIZ1
AK2
NEK3
FLYWCH1
HID1
CDR2L
YIPF3
POLR1C
LRRC73