ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HDAC4 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◣ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

DUX4
MTRNR2L1
FRG2C
SPATC1L
MTRNR2L2
MSH3
DHFR
MTRNR2L8
SP2
MAMDC2
TNFRSF19
COL23A1
FRG2
ADAMTSL1
KIF5C
CABCOCO1
CCDC200
DNM2
EVI5L
H4C3
H1-6
H4C12
H4C11
CLPB
UNK
H3-3B
FEM1A
H4C15
H4C14
H3C15
H3C14
H2BC14
H2AC14
FAP
EAPP
RFX1
EMCN
DDX49
COPE
LOC102724770
H2AC19
H2AC18
DGCR6
UCKL1
BOD1
NAV3
KATNB1
PAFAH2
PHF12
SLC8A1
NAA80
IFRD2
HYAL3
RWDD1
CHMP4B
POLR3F
DZANK1
PHRF1
SP1
RBBP5
KHSRP
ARHGAP35
AP2S1
VPS50
HEPACAM2
FBXL19
CIC
PHB
CALCOCO1
DPH6
TCEA2
RAB5B
PMEL
CDK2
ARID5B
TMEM115
NPRL2
CYB561D2
SLC25A25
NAIF1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
TESK2
MMACHC
CCDC163
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
SUCLG1
MRPL24
DDX23
H2BC4
H2AC6
RAG2
IFTAP
HIKESHI
YJU2
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
TEPSIN
NDUFAF8
MAPKAPK5
ID3
ANKHD1-EIF4EBP3
ANKHD1
WDPCP
UBE2T
PPP1R12B
MDH1
BOLA2-SMG1P6
PAK1IP1
C6orf52
TMEM242
WDR74
STX5
PES1
IRF2BP2
PEX14
DFFA
HDGF
NEBL
LY6L
THRAP3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
S1PR4
NCLN
TBL1X
HDAC9
ING4
GSPT1
SPAAR
HRCT1
CALR3
C19orf44
BANP
TAF12
PRCC
OR4M1
TSN
CCDC90B
H2BC15
H2AC15
ZFYVE1
AURKAIP1
TSNAXIP1
RANBP10
RPS7
RPS20
VIPAS39
AHSA1
OSBP
MALL
TOM1L2
DRC3
PEMT
EHF
KRT39
GALM
SMPD3
VARS2
GTF2H4
UNKL
C16orf91
NLK
TSC2
NTHL1
PPRC1
MTOR
LARS1
TMEM208
PNKD
LRRC29
GPBAR1
AAMP
SYMPK
FOXA3
TMEM70
INTS9
HMBOX1
ELOC
RPL32
PNPLA6
PARP16
ZNF225
ID1
RPS3
NUP205
NDUFS3
MRI1
KBTBD4
FAM180B
C19orf53
H3C4
ST3GAL2
TP53I3
SF3B6
FAM228B
CCAR2
C8orf58
INVS
ERP44
ZNF268
HNRNPC
LRCH4
FBXO24
UBQLN4
LAMTOR2
ZNF547
TRAPPC2B
TSSC4
PRR14
FBRS
ORMDL3
GSDMB
SIRT4
SCAF1
RRAS
NUF2
ADAMTS9
BUB1B
SLC35B1
POLDIP3
COMMD1
CCT4
ZNF687
ZNF143
LSG1
SF3A3
GSK3A
ERF
RGPD2
RGPD1
SUPV3L1
TMEM262
C1orf159
FASTKD1
SLC35E2B
RANBP2
ZNF165
OR1F12
FAM168A
NUDCD1
PRRG2
NOSIP
TXNDC5
ZNF17
PSMD11
CCDC146
DSTYK
GPR137
OR4Q3
OR4N2
TMEM107
TACO1
NDC80
METTL4
H4C5
H2BC7
H2AC7
PROSER3
LIN37
HSPB6
TRIP10
GPR108
UFD1
OAZ3
MRPL9
CDC45
NFKBIL1
DDX39B
ATP6V1G2
TBL3
RPS2
RNF151
NOXO1
ZNF513
SNX17
EIF2B4
GBA
DYNC1I2
ZNF585B
ZNF383
TMEM94
BMP5
ZMYND10
TXNRD1
SSR3
SLC39A1
CRTC2
CREB3L4
IL32
SPSB3
MRPS34
HEXB
EME2
FRMPD4
ZSCAN22
SUPT7L
SLC4A1AP
G3BP1
BMF
STAM
TFPT
PRPF31
TIPARP
PIN4
STT3A
ARID2
CACTIN
GATB
SSBP1
SP5
ART1
UFSP2
SART3
ISCU
C4orf47
VCPIP1
C8orf44-SGK3
ZBTB38
SCRIB
SIRT2
NFKBIB
ZNF140
CYCS
UBAC1
TSNAX
SNX16
SUFU
ACTR1A
LMNB2
RPL36
MICOS13
HSD11B1L
FARSB
STIP1
ARHGEF9
NUDT13
HEXIM2
RNASEH2A
PRDX2
AK2
SHC1
FLAD1
CKS1B
NUP107
RARB
PRR5L
CP
COMMD9
OLFML2A
NR6A1
ZNF608
TIMM21
MTRNR2L9
FBXO15
TMEM60
PHTF2
VTI1B
TM4SF18
COX16
KIF2C
CCDC174
WT1
UTP3
ING3
ZNF235
TNFRSF12A
THOC6
HCFC1R1
CLDN6
PSPN
ALKBH7
RXFP4
PTPN6
KHDC4
RGS14
LMAN2
WDR46
RGL2
PFDN6
RPIA
ZNF417
SPHK2
RPL18
FAM83E
RAB11B
CNIH4
MEIS1
KIAA0895L
EXOC3L1
ELMO3
E2F4
PANK4
HES5
MRPL53
MOGS
UBR2
ZNF335
ZC3H10
RPL41
SEC61B
ALG2
ZNF444
POLR2E
GPX4
TBL1XR1
TRDMT1
KRR1
REXO1
BAHCC1
PIGL
NCOR1
ANAPC5
FAM187A
EFTUD2
CCDC103
SEC11C
RBM42
TRAF7
RAB26
NFIB
ZNF576
IRGQ
DOK3
DDX41
SNAP25
OST4
KHK
EMILIN1
KBTBD6
TRAPPC6B
PNN
TMTC3
CEP290
CAND1
GOSR2
NMT1
DCAKD
MRPL21
IGHMBP2
SMG8
METTL3
STX16
ISY1-RAB43
ISY1
TULP2
PSENEN
NUCB1
EIF3F
SRSF11
LRRC40
C19orf48
INTS1
NDUFS7
MED27
AHCYL2
NME1-NME2
NME1
ZBTB45
SLC27A5
SLX4IP
MKKS
TTI2
PWWP2A
TXNDC2
ZSWIM3
ACOT8
RNF121
LOC100133315
ZFYVE19
NPAS4
DNAJC17
DCAF7
UTP11
UBE2I
FHL3
HNRNPL
CDK5RAP2
SYP
PRICKLE3
EIF2AK3
ANKRD28
PCM1
CCP110
ZFPL1
CDCA5
SAMD1
MISP3
C19orf67
TATDN3
NSL1
COX7C
ZNF48
VMO1
TBC1D10B
RPL27
PSMB6
MYLPF
IFI35
GLTPD2
ATP6V1G1
EMILIN2
TCERG1
MTRNR2L10
GTPBP6
BAZ2A
ATP5F1B
SSBP3
SMAD3
ZMAT2
HARS2
HARS1
H4C8
GTF3C3
C2orf66
BCL3
VWA5A
RPS27A
IPO13
CLHC1
PHB2
BCL2L1
SLC25A20
HMX2
BUB3
TINF2
NEDD8-MDP1
NEDD8
GMPR2
GET3
TAOK3
SUDS3
PTPRH
PCBP1
KRT19
KRT15
CLN3
APOBR
RPS6KB2
PTPRCAP
EXOSC5
BCKDHA
PHF19
MRPS7
MIF4GD
GGA3
ZNF337
SUGP1
MAU2
C12orf43
MRPL28
ARL4C
SEL1L
PPP5D1
CALM3
USP17L22
USP17L21
USP17L20
USP17L12
USHBP1
NPIPA1
BABAM1
RPL35A
JOSD2
IQCG
HNRNPUL1
FNDC3A
ASPDH
ZNF384
SHPK
CTNS
CAPN15
NOC4L
NDUFAF5
ESF1
DDX51
NDUFB5
MRPL47
CDCA8
C1orf109
CTDP1
ZNF691
MITD1
C5orf38
RHOT2
RHBDL1
KMT2B
ZNF500
RPL9
LIAS
EMP3
CTU1
ZNF776
EXOC4
STK36
RNF25
RBL1
ZNF605
EXD2
SMARCAL1
PPP1R12C
CD79A
ARHGEF1
PPP6R1
SRD5A1
EMC4
TRIP4
PCLAF
RPL18A
KRT23
MRPS23
SEC13
COPS7A
TRMO
GSTO2
WNK4
VPS25
TOP2A
SMARCD2
SELENOH
PABPN1
DLGAP1
PLA2G4A
DHX8
CLCN5
RPAIN
NUP88
ZAR1
CD2BP2
IRAG1
PEAK1
NOP16
HMG20A
HIGD2A
LYRM4
FARS2
RGS19
OPRL1
LKAAEAR1
AP2M1
SSBP2
MRPS18C
HELQ
TMEM160
USP48
SNX1
CIAO2A
FBH1
ESYT1
VEZT
IARS2
FGD6
BPNT1
RPL37
EPS15
CARD6
CRADD
STAM2
UBE2J1
FBXW11
PDE6D
INO80C
IER3
FLOT1
COPS7B
ATP5MG
HEATR5B
GPATCH11
SRCIN1
TARBP1
CCNL1
ZNF211
SYT7
SLC39A9
MTMR9
ERH
SLC25A19
OR6B2
NDUFA10
TLE3
GLIPR1L1
CAPS2
USP30
PRORP
PPP2R3C
RCAN1
PTEN
KLLN
CCL3
UVRAG
MARS1
ARHGAP9
TMEM109
PRPF19
PLA2G15
H4C4
H2BC6
DMAC1
AP1G1
NDUFB3
MTRF1
INTS10
FAM126B
ZCCHC4
ARHGAP17
MYOM2
MT2A
WDR97
TPRKB
SH3RF2
RNF213
MAF1
CYC1
WFIKKN1
METTL26
GTF2I
FCRL5
LTN1
CSDE1
TM9SF4
STK25
GABPB2
DYNC2I2
RABAC1
ANGPTL2
ZNF688
USP22
ZC3H12A
XAB2
STXBP2
PCP2
SESN1
GUF1
CEP57L1
TOMM40L
ASAH2
APOA2
ARHGEF2
TBP
PSMB1
MATR3
ZNF420
BRWD1
ZCCHC8
TRAPPC9
VARS1
VRK1
KLHL29
PSMC5
FTSJ3
FCF1
AREL1
DENND1B
TOR1AIP2
TOR1AIP1
GORAB
PLEKHM3
SF3B3
COG4
B4GALT3
COMMD2
CCDC124
RPS23
ATP6AP1L
SREK1IP1
SNAPC1
RAD52
LTA4H
HSPA9
CWC27
BMERB1
HEMK1
C3orf18
ZNF628
NAT14
STAT1
NR1H3
ACP2
SYNGR4
PPP1R2
ID2
CORO1A
API5
ZSCAN5A
RPL21
NFATC2IP
EIF4A1
CD68
ABT1
TJP3
SF3B5
NVL
ZC3H6
SIX1
ZNF286A
RBM28
TBC1D17
PNKP
ATF4
AKT1S1
RMDN2
CCDC138
CCL3L3
CCL3L1
RPGRIP1L
FTO
THAP1
MDM2
ENPP4
EIF4A3
CLIC5
HMOX1
CGGBP1
ZMYND8
TRIM55
ACTL6A
NMNAT1
LZIC
KLF2
ALKBH3
ZSCAN32
ZNF174
XPNPEP3
ST13
PDE4DIP
GCLC
DNAJB7
CCDC110
FAM177B
ZNF548
LNPEP
ATP2C1
ZKSCAN8
ZBTB5
PEX3
ADAT2
KLF6
DBP
CA11
TXNDC11
TMEM256
PLSCR3
NLGN2
CHPF2
ABCF2
CENPA
HBP1
RPL14
THRA
PTDSS2
MED24
ANO9
TEKT2
ADPRS
FUT10
CYTH3
SCT
DRD4
CDHR5
CCDC59
TMEM63C
RAB5C
NLRP3
RAP2B
PRDM15
CCL5
TXNL4B
TIMMDC1
DHX38
ASXL1
ALG10B
SMCO1
CXCR5
CBWD5
CBWD3
AIM2
MYEOV
MPV17L2
HCAR3
TSPO
MCAT
GUCY2D
DPP9
CNOT1
CCDC39
ADO
UQCRC2
DAGLB
TPGS1
CBWD2
PEX26
ZNF56
TOM1
RTRAF
RTF2
KCTD5
MDM4
IL17A
NPR1
ILF2
GLDN
CCM2
UBE2H
RASAL2
NCOA7
KANSL3
FER1L5
BDH1
TJP1
RUFY3
CRYBB1
VPS52
RPS18
B3GALT4
C1orf198
TTC33
TRMT10C
THAP11
TGIF1
IFNGR2
COX7A2L
TRAPPC3
MAP7D1
LOC100130520
KDM6B
CD300H
C17orf77
ZPBP2
ZNF124
USP3
RGS8
IKZF3
UBC
SNRPB
SKA2
PRR11
DRAP1
C11orf68
KAT6B
CSNK1G3
WHAMM
HEXA
FSD2
CHST12
BBX
NDUFC2-KCTD14
NDUFC2
KMT2C
HOOK1
RIIAD1
NUP153
MED23
MAP2K3
IRF2BPL
ENPP3
CELF3
NGB
NAT16
FETUB
SLC33A1
CMSS1
BIN2
PARP2
CCNB1IP1
BTRC
SNRPD3
LAMP1
GUCD1
EML2
DOLPP1
LRRC14B
ZNF285
FMO4
DHX33
AQR
PAX5
MNT
MACC1
FGG
POLG
MUC20
MRM3
GLOD4