ChIP-Atlas: Target genes

Potential target genes for NKX3-1

Query protein: NKX3-1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478564 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
NKX3-1's Target genes

◢ NKX31: Average

◢ SRX10478563: Hep G2

◣ SRX10478564: Hep G2

◢ SRX062357: LNCAP

◢ SRX062359: LNCAP

◢ SRX180379: LNCAP

◢ NKX31: STRING

XKR7
NPAS4
IQSEC3
LIN28A
INSM2
NKX1-1
FAM24A
CELSR3
HTR5A
L1CAM
KCNH7
GLRA1
RAB37
EPHA10
CPLX2
SMIM17
DLGAP3
ZC3H18
SCRT1
DGAT1
RTBDN
MAST1
MTRNR2L2
MSH3
DHFR
MTRNR2L1
CHGB
BARHL1
DUX4
SNAP25
SST
MTRNR2L8
RANBP3
ICMT
HES3
MYT1
CCDC200
MAPK8IP2
LHFPL5
CLPS
SLC12A5
ANK1
GDAP1L1
KCNK12
TMEM181
MMP24
FRG2C
CADM3
HPCA
NPPB
CA4
SRRM3
DNAJC6
BPIFA3
SEZ6
NTSR2
LPIN1
PPP2R2C
GCFC2
SCRT2
TMEM230
PCNA
CDS2
EAPP
ZNF23
KDM3A
PPFIA3
C19orf73
CHRM4
GRM1
SIGLEC10
LEMD3
RAP1GAP
SLC39A3
PTMA
SCGN
CHRNB2
UBE2Q1
PTPRN
OGDHL
VGF
RIPPLY2
CYB5R4
USP30
SVOP
CDIP1
RAB11FIP4
CCDC92B
KLF11
HBQ1
HBA2
HBA1
SLC7A6OS
PRMT7
LOC102724770
DGCR6
NRSN1
HS3ST2
STMN3
RTEL1
WDR74
STX5
ODC1
RNF130
CABP7
UNC80
JPH4
PGBD5
PDE4C
PAX5
HMGA1
ZFYVE27
BICDL1
DLL3
IKZF3
ZPBP2
PTPRS
CEMIP
SCAMP5
JPH3
PMS2
AIMP2
SPNS2
PDE1C
N6AMT1
MFF
RFC1
CDCA7
PIK3R3
PTPRH
VWC2L
SPHK1
SEZ6L2
ASPHD1
SLBP
TMEM129
TACC3
STAT1
PRMT8
MLN
FRG2
TRIM44
HES6
FUS
LCLAT1
THOP1
SGTA
HDAC2
PROCR
CHGA
PTP4A2
GRM2
TAF12
FBXO41
EGR4
FBXL16
HHATL
TMEM179
DHDDS
TIGD1
EIF4E2
BCL7B
DNAJC11
TEX14
RAD51C
NEUROD1
GPR78
SLC18A3
CHAT
NR1D1
C1QL2
EVI5
CPNE9
NOC3L
CTNNA2
CTF1
BCL7C
GPR6
AP3B2
LHX5
SIRT4
GTF3C3
C2orf66
RESP18
PAQR7
KATNA1
DIABLO
GJA10
SCAPER
CTDSPL
LTB4R2
LTB4R
CIDEB
RPL31
TPH2
RAMAC
HCN2
H4C12
H4C11
H2BC14
H2AC14
EFHD1
POU4F3
ZNF473
VRK3
USP14
H4C3
H1-6
TINF2
GMPR2
RBM28
KCNH6
H2BC15
H2AC15
HEXD
ADGRG6
SPOP
ZNF3
COPS6
PET117
KAT14
RNASEH1
ZFR2
ATCAY
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
SLC7A14
LGALS13
NDUFAF1
LOC112694756
PRKDC
MCM4
TMEM107
PMVK
SMARCD2
LRP6
CEP295
C9orf24
MYORG
MARCHF4
PTDSS1
MTERF3
GDI2
HRH3
SMPD3
E2F3
WDR36
PSMD3
TTI2
OPA3
FGG
THAP7
P2RX6
NEK3
SCG2
PODXL2
URGCP
UBE2D4
ARFGAP3
AATF
PLEKHM3
KCNAB2
UGT1A1
GPRIN1
TMEM268
SOD2
RNF227
WTAP
PDHB
MGAT3
DHRS2
ACSL3
KCNN4
PRMT5
QTRT1
TMEM242
POLDIP3
KPNA2
HDAC4
AKAP10
DISP2
MOGAT1
SLC45A4
TM9SF1
IPO4
KCNH4
HCRT
TSSK4
TOMM34
STK4
TRPM8
FAAH
RNF103-CHMP3
RMND5A
SULT4A1
CRH
DDX1
SRSF6
NMS
SCG3
RAD50
MAT2A
SPAG4
CEACAM8
ARHGAP1
ABCA3
ZNF408
SUPT3H
ARSG
TTI1
RPRD1B
LTV1
EPM2A
ESYT3
VRK2
PRRT2
PAGR1
MAZ
UTP11
FHL3
HECTD1
ZBTB4
SLC35G6
POLR2A
ANKRD36
NCAN
MRPL3
E2F1
TSEN54
LLGL2
CASKIN2
ZFP90
EIF4A3
DNER
ADCYAP1
EPHX2
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
H3C12
H2BC17
H2AC17
RSPH3
MED31
C17orf100
MTF2
TOB1
SEC14L1
GOLM1
CDK5R2
CCDC88C
PTPN6
C12orf57
CENPA
PCDH8
CCNL1
IL17RC
CDC16
GTF3A
NANP
PHF20
GPN1
CCDC121
RIOK2
SNRPB2
ID2
DPP10
MEX3D
RTN2
PPM1N
S100A8
S100A7A
HTR1A
KIAA0895L
EXOC3L1
E2F4
GRIK2
AIP
SYP
SLC25A21
RGMB
CNKSR3
SEH1L
SNAPC2
CTXN1
CC2D1A
C19orf57
LRP2BP
POU2F2
ANKRD37
UTS2R
FANCD2
NOP14
GRK4
H3C4
TGM1
RABGGTA
H4C4
H2BC6
ELOVL3
DTD2
SCIMP
FANCL
MDP1
CHMP4A
GGACT
E2F6
SIT1
CCDC107
ARHGEF39
WASHC1
CYP4F3
PGRMC2
TMEM106B
RGS20
ZNHIT3
NME6
CFDP1
NID1
DNA2
APOLD1
GRM4
DLG2
PCSK1
THUMPD3
UNC13A
BSN
MVD
VPS13A
HLTF
HS6ST1
LRRC59
NCL
RARA
MAMDC2
SCGB1D2
RRP1B
HSF2BP
MAPK12
POLE4
RPLP1
HSP90AB1
ZNF337
ACSL6
CITED2
SNRPB
NSFL1C
SMDT1
PHETA2
H3C3
H2BC3
TERF1
NAGA
HBM
CNPY3
ZNFX1
RPS13
ZNF131
MPPED1
KIF5C
OSCP1
SRSF7
NBPF1
ATP5F1E
LRIF1
ZCCHC7
ANO10
ABHD5
ZDHHC22
SNTG1
AP5S1
ANKRD34C
CLVS1
ANKRD36C
PRG3
SLC6A17
SH2D3C
NDUFS7
TMEM115
NPRL2
CYB561D2
NOMO2
KIFC1
SLC25A10
MRPL12
CFAP65
C16orf72
ZMYND10
RASSF1
LONP2
ABCC11
POLR2J3
PRRC2B
CCDC83
NAGK
BRMS1L
EIF2D
PBRM1
GNL3
CERS6
ISM1
NELFA
TSPAN10
NPLOC4
ATP6V1B2
TBC1D14
GET4
REX1BD
RAD9A
PPP1CA
KRI1
CDKN2D
DUS1L
NME1-NME2
NME1
MNAT1
MRPL44
INSR
H1-2
DHRS4
GLUL
CMTR2
NPDC1
ENTPD2
SYNJ1
TEFM
HHIPL1
CCDC85C
TEDDM1
THNSL1
GPCPD1
NDUFS3
KBTBD4
FAM180B
TASOR
SLC44A1
MCM3
EIF2B3
CCDC57
SLC25A3
SLC24A1
INTS14
EIF3CL
EIF3C
C14orf93
GRIA2
AKAIN1
XKR4
CTXN2
CEACAM18
RPF1
PRDX1
EBAG9
EBNA1BP2
CFAP57
SLC3A2
SHOX2
NXF1
TIMM21
FBXO15
ZNF783
ANAPC11
ALYREF
HIRIP3
OPRM1
LUC7L
FAM234A
ST8SIA3
SPTSSA
LMCD1
RIF1
ASS1
NUP62
IL4I1
ATF5
COX18
PNPO
CDK5RAP3
SLC17A9
ZKSCAN2
KCNC1
CKMT1A
GATAD2A
IPMK
CISD1
SLC6A12
KANSL3
FER1L5
ZNF579
FRA10AC1
CNTRL
C5
CDK5RAP1
METTL2A
TK2
CKLF-CMTM1
CKLF
TMEM14B
CYP21A2
GINS2
SELENOV
ID1
SPRYD4
CALB1
FEM1B
MYBL2
COA7
TAS1R3
NR1H3
ACP2
FOXJ3
TUBGCP3
GOLGA8A
UCKL1
DLX2
DPYSL4
C16orf89
ALG1
FTL
RTL10
GNB1L
AGO2
KIAA1586
POLG2
DDX5
H3-3B
UNK
STX16
P4HA1
ZC3H7A
NOMO3
ABCC6
CCDC117
LDHA
KIF2A
LSM12
G6PC3
KIF2C
MIA2
CCZ1B
TANK
SYNGAP1
PHF1
CUTA
ABCB6
EFCAB13
DIDO1
CTNNB1
CALM1
MAP2K2
MLXIP
SRSF2
MFSD11
PSMF1
SCFD1
GID8
ZNF296
GEMIN7
CCDC116
MOCS3
DPM1
NOLC1
TFRC
C7orf25
GINS3
ZNF629
TMA16
FN3K
DUS2
DPEP2NB
DDX28
HMBS
H2AX
DPAGT1
CPPED1
FBLL1
EPOP
POLD2
SSTR5
DDIT4
CENPS-CORT
CENPS
ELAC1
RTTN
ZNF628
NAT14
BCKDK
PITRM1
FURIN
ATIC
RPL27
IFI35
VPS29
RAD9B
CD320
ZNF248
TXNDC5
DISP3
S1PR2
C10orf88
CHID1
AP2A2
TMED4
DDX56
ZNF207
C17orf75
ZBTB33
PRLHR
SAR1B
INTS12
GSTCD
MSH5
DDAH2
CLIC1
MARCHF11
ZCCHC3
C20orf96
CPNE4
GLS2
SMAD2
UBE2S
KCTD13
GJD2
BARHL2
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
LTA4H
H2AJ
SLC35A3
TMEM167B
HSPA1B
TRAPPC6B
PNN
FAM133B
H4-16
RUNDC3A
FAM163B
SLC39A4
CPSF1
COQ8A
ZNF770
EXOC2
HNRNPAB
TP53RK
SLC13A3
THUMPD2
TRIM67
VCPKMT
TUBB1
CTSZ
KCNIP2
HERC3
PYURF
PIGY
NDUFAF5
ESF1
TRIP4
NSUN5
PCLAF
SUPT7L
SLC4A1AP
UGDH
YTHDF3
RPS19
HEATR5A
MEIG1
DCLRE1C
ARL17B
ARL17A
DUSP7
ERCC6
ACAD9
ACTL6B
PPY
ZNF280D
ANKHD1-EIF4EBP3
ANKHD1
ACTA1
UBE3B
CDC20
CPQ
ITPRID2
NOL10
EIF2S2
RBM18
MRRF
PPP1R3C
OTOA
PKM
RXRA
ELOVL1
PBX3
KRR1
PRR22
DUS3L
TACO1
DCP1A
GGA2
SMC3
PSMC3IP
TIPIN
TIMM44
EIF2B5
BIRC6
SMAD5
TOMM5
NOL7
AAR2
LDAH
SNF8
SLC23A3
RPIA
RETREG2
CNPPD1
ZSCAN9
CCL16
CCL14
CLCN7
NQO2
CAMTA1
RANBP2
RPL10A
MRPL27
EME1
SNRPD1
SRP19
JPT1
DHX40
CDIN1
C19orf48
ZNF487
MBTPS2
MUC3A
PRCD
GOT2
TSPO
MCAT
BRSK2
CACNG7
NPM1
FAM120B
SKOR2
CYGB
SCGB1D4
OR1E1
GFI1
BBC3
OPA1
CSTF1
AURKA
MAPKAPK3
CISH
COPS7A
INA
NFATC3
FABP1
TBCB
POLR2I
OVOL3
IGFBP4
EBPL
XKR9
LACTB2
MRPL58
MGST3
ZSWIM1
SPATA25
NEURL2
CTSA
KIAA1191
AARS2
MIS18BP1
HINFP
ARL10
FERMT1
TPRA1
MCM2
PSTK
TMC7
STK25
GTF3C6
DGAT2
PCSK9
MTHFD1
TEAD3
HESX1
APPL1
EIF3B
CPE
RIOK1
CAGE1
TGOLN2
RNF4
LAPTM4B
TMEM116
ERP29
GPSM1
CARD9
LONP1
CATSPERD
NOMO1
IPO7
NET1
TAF3
HAUS4
TCF25
TGFBI
WDR11
NHEJ1
CETN3
UQCC2
EPB41L4B
STX18
STAU1
DDX27
IER3
FLOT1
PIGL
NCOR1
TBC1D19
AMZ2
HASPIN
PNPT1
PYCR1
MYADML2
MAFG
GPC6
CCNC
GTF2H2
GTF2H2C_2
HNRNPH1
MOB4
GOLGA4
TOB2
POR
TJAP1
UBE2V2
KIAA1958
C9orf147
C4B_2
C4B
WASHC2C
USP42
STK19
LOC110384692
DXO
C4A
SRP54
GDAP1
PLLP
FAM227B
DTWD1
IDH3B
HNF4A
PDP2
USP4
ZNF768
ZNF747
LNPK
GPX1
FAM151B
BTBD10
ARL6
CALM2
PTPN2
RHOB
TSN
FAM83D
RPL5
FGFBP3
PTPRK
LTO1
YIF1A
TMEM151A
SMIM26
RPL3
HAAO
SH2D2A
NTRK1
AVPI1
ANKRD39
GTF2H2C
SRFBP1
SLC25A36
MYBPHL
MRPL17
KCNB1
PTEN
KLLN
ATXN2L
TPBGL