ChIP-Atlas: Target genes

Potential target genes for HMGB1

Query protein: HMGB1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10567329 | IMR-90
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HMGB1's Target genes

◢ HMGB1: Average

◢ SRX10567335: HUVEC

◢ SRX2765964: HUVEC

◢ SRX10567327: IMR-90

◣ SRX10567329: IMR-90

◢ SRX10567331: IMR-90

◢ SRX10567333: IMR-90

◢ SRX3585704: Lung fibroblasts

◢ HMGB1: STRING

DUX4
KMT2A
GTPBP6
FRG2C
NBPF1
LOC102724770
DGCR6
PHIP
FRG2
TAF5
CDCA7
USP31
CRH
THOC3
IRAK2
MFSD2A
ALDH18A1
H4C12
H4C11
SRSF6
H2BC14
H2AC14
ADCK1
NPIPA3
NPIPA2
PLA2G10
POLR3H
TMEM41A
ART1
GPR89B
FLVCR2
FH
PIGH
LHX9
C1orf53
RANBP17
METTL3
ABCC5
FEM1A
GNG14
DHPS
CLCC1
NUP54
CREBZF
ZNF442
CDKN2B
GINS3
MTMR9
KCNIP2
PEBP1
CRYBG3
DDX1
RECQL4
MFSD3
LRRC14
GPT
H2BC15
H2AC15
AQP5
AQP6
RPLP1
PUS7
RINT1
GPR89A
PTGES2
SDF4
B3GALT6
SLC10A7
NAAA
NAE1
DARS2
CENPL
ADGRL1
ATP6V0E2
CLSPN
TCERG1
CCNB2
ZNF878
PDXDC1
CDC37L1
MYO5A
IARS2
BPNT1
PPAN-P2RY11
PPAN
ANGPTL6
P2RY11
SLC26A6
ZFP64
CUL5
POLR2J3
NR2C1
LUC7L2
FMC1-LUC7L2
FMC1
LSM6
USP30
CTH
FOCAD
COX18
TOX4
RAB2B
NF2
IGSF8
MRFAP1
CRTAP
TBC1D16
CCDC40
TMX4
RNF135
ZC3H14
PTPN21
GGH
TNFAIP8L2
SEMA6C
NSFL1C
CYP2R1
ZNF774
HDHD5
C15orf61
STX18
ZNF419
C14orf132
ASXL2
HYLS1
RBM5
CHGB
ZC3HC1
H4C6
H3C6
H1-3
ZNF429
RAB11FIP2
NRXN2
UCHL5
RO60
CBR3
RBMXL1
KYAT3
CFL2
DHRS7
WDFY2
ALOX12B
MTF1
CRYM
TMEM33
SGCD
ZDHHC14
USP47
INTU
FDFT1
POLR3G
MBLAC2
DNAH2
SPAAR
HRCT1
TFDP2
VASH2
TARS3
C12orf45
ZNF555
ATP7B
ALG11
SNRPB
TMEM68
TGS1
IGSF22
SLC66A3
ABI2
XPR1
SCN3B
ABCB6
ZNF197
NOTCH2NLA
COQ8A
PRKAB1
TENT4A
NOL4L
RSU1
ZNF862
UHRF1BP1L
HERC6
CHD1L
CSTB
ITGA4
YARS2
CEP83
ATXN7L3B
CTSL
ENDOD1
SECISBP2L
HEATR5A
SUMF1
PCOTH
MIPEP
C1QTNF9B
SELENOT
ZNF799
TYMSOS
TYMS
SLC25A30
C18orf25
PPP2R5B
C17orf64
ATG2A
RIF1
SMIM5
EFR3B
SERP1
EIF2A
NFATC2
PSD2
HSD17B12
SYNGR4
DEPDC1B
CASP7
ASH2L
LTO1
CC2D2B
SLC25A27
CYP39A1
CCDC112
CRY2
AAR2
RSPO2
OSBPL1A
PDZD2
TOR2A
GALK1
ATP5MC3
CCPG1
C15orf65
CMTM7
PDS5A
AHCY
AKR1E2
ZFYVE16
YIPF4
INTS6
PSMB8
TAP2
RAG2
IFTAP
VPS35
LCORL
PEMT
SEPHS2
DNAJC30
BUD23
IREB2
XRN2
FAM219B
OLA1
ARMC1
SLC35B2
NFKBIE
TMEM151B
VAV2
GTF2B
RBL2
MTX2
CPLANE1
PUS1
ZNF786
WASHC2A
C9orf40
SLC1A4
H3C13
H2BC18
FANCA
ASAP3
RDH12
RDH11
ZNF566
STRIP2
MICAL3
PPIC
MRPL21
IGHMBP2
CEP97
NOTCH2
PDCD6IP
ICA1L
EFS
NUDT7
IL25
ABCC9
MRFAP1L1
BLOC1S4
METAP1
DEF8
GPR39
SLC17A7
PACC1
LOC389831
RFK
TMEM9
PIH1D1
ALDH16A1
GTF2IRD2B
EPS8
ANKRD36C
EFHD1
KCTD12
RNLS
LIPJ
ZYG11A
RNF7
DMXL2
ZNF337
UNC45B
NLE1
PSAT1
USF1
TSTD1
ANKRD36B
TECPR2
CINP
PAM
ME3
WWC2
FANCF
USP45
TSTD3
ACOT2
SPECC1L
ARHGAP22
PLEKHA5
ANKRD18B
ZNF441
SNPH
ZNF407
IL15
IMP4
CCDC115
GOLGA1
UBE2G1
NSA2
GFM2
ARMC8
CCNC
SLC35E2B
CCDC74B
ZNF564
MTFR1
ZC2HC1C
ACYP1
DESI2
ZFP1
CLIP1
MTMR6
GAS1
SLC2A12
SIL1
CDK8
ATR
TSNAXIP1
RANBP10
CCDC91
ERAP1
KATNAL1
ZFP69B
ZC3HAV1
C3orf33
FCGR1A
VAT1
RND2
ANKRD46
ATF3
TRIM52
ZBTB45
DYNC1LI1
MYEF2
CTXN2
CNIH4
TADA1
HSPE1-MOB4
HSPE1
HSPD1
PIK3C2B
DTD2
SLC27A5
CFAP206
VSIG10
RAB18
CMTR1
CTDP1
RAB11FIP3
RMND5B
SLC35E4
PLK4
ROPN1L
ZNF25
UGGT2
SLC30A5
LSM5
AVL9
TTLL4
ATL1
PGP
E4F1
ELMOD2
CEP85L
H3-2
VRK2
VARS2
GTF2H4
SEC11C
NGRN
CLK4
SLC25A38
LNPK
BMPER
HSF2
INVS
ERP44
DZIP3
CIP2A
PRX
MARCHF3
MRNIP
TFRC
SDHAF4
MSRA
BZW1
MCMBP
NRG1
CCDC126
MAST4
CTSD
TSN
NT5C
BARD1
CDKN3
PRR30
PREB
TNPO1
LYST
CLASP2
SERPINI1
PDCD10
PYDC1
SOX6
C11orf58
TRIM72
ZFP41
SLC16A14
C15orf48
EPHB1
SPATA18
TSC2
NTHL1
PWWP2A
MRS2
KBTBD6
TDGF1
ZNF624
RAD21L1
LRRC2
NBEAL1
GRAMD1B
ELOVL5
STK10
EFCAB9
AKTIP
STRIP1
TCHP
SLC26A2
BLMH
PAK2
FADD
CRACR2B
RPLP2
PNPLA2
TERF2IP
KARS1
MTRR
FASTKD3
LSM10
ZSCAN31
TAP1
PSMB9
KIAA1586
TRIM62
ZKSCAN3
ZRANB3
R3HDM1
ANKHD1-EIF4EBP3
ANKHD1
RPL39L
ANKRD36
SKP1
ZNF777
GOLGA6L4
RCBTB2
DEPTOR
TMEM242
UBXN4
FNTB
TARDBP
ERBB3
ETFBKMT
RSF1
AAMDC
GPATCH2L
ROBO3
UBE3A
BBX
BVES
PNP
PIP4P1
GOT2
ZKSCAN4
NKAPL
ZNF443
MRPL42
DSTYK
TRPC6
ZNF785
LAG3
DGKE
C17orf67
PKP4
CCDC148
MYBPC3
TMC7
TEFM
IFIT5
NMI
CDCA7L
TMTC3
CEP290
DHX15
TBRG1
PTGFR
RPS15
ZNF717
TACO1
FAM53C
CDC25C
ADRM1
ITPR2
RANBP6
KIAA2026
ZBTB17
MYLIP
PFKM
PTPRN
SF3B5
SCNN1A
LTBR
CRADD
ERO1B
C3orf14
AGPAT4
FAM167A
WNT2B
ZNF18
LRRC58
HK1
MND1
PTPA
CRAT
PKN3
KLHL7
TOM1L2
DRC3
NOD1
ADAMTS13
ZNF765-ZNF761
ZNF765
RFC4
REXO4
PDIA5
CD302
HIF1A
UAP1
ORC2
MCM6
PARP8
RSPH3
SLC3A2
HLTF
CHERP
PCDH9
TBC1D4
ZNF326
KIF2A
SAYSD1
DTX2
GPR37
PCTP
ULK4
RPS3A
GPN1
CCDC121
VANGL2
TMEM120A
NR1H2
NPIPB9
NAPSA
MAN2C1
GRIA4
SPR
PHAX
ALDH7A1
RUVBL1
EEFSEC
PHYH
PPM1L
SLC35B4
MTMR3
SLC38A4
RBM6
ST20-MTHFS
GPR63
MANBA
RNF34
ZUP1
TRNAU1AP
ELAC1
ARHGEF7
PANK1
TMEM43
CHCHD4
CNOT3
ZNF32
ZDHHC20
PRTG
PGM2L1
ALG6
ACOT11
BBS7
KLHL20
ACER2
VSIG8
FBXL20
OPTN
CCDC3
MSH6
INTS8
NAP1L1
EAPP
ZNF136
DPYSL3
CFAP298-TCP10L
CFAP298
SH3RF2
G3BP2
FAM13C
LRP12
USP13
LMF1
DNAJC3
CCN3
ZNF184
CTBS
ARL8B
SNX14
TMEM254
GMCL1
SLC35B1
APOBEC3D
TERF1
MDM4
TFB2M
CNST
APOBEC3C
ANXA4
AGPAT5
SLC16A1
FBXL17
ADAMTS7
YTHDC1
SLC25A13
SOGA3
OMA1
DAB1
TNFRSF21
DSCC1
TMIE
ALS2CL
PGM2
LRIF1
SMG7
CAVIN3
UQCC3
UBXN1
PCGF6
LBHD1
CSKMT
C11orf98
FAF1
CDKN2C
GOLGA6L3
UBE2L3
KCNAB2
SPATA5L1
GATM
ZNF780A
RNF6
SOX15
RIMBP3C
RIMBP3B
MPDU1
LOC100996842
GPD1
COX14
CD68
HACD2
DDAH1
FAM228B
MACIR
FOXJ2
NOTCH2NLC
ENOSF1
GOLGA6L10
WASF1
CDC40
HSPA6
ZNF91
EIF3J
NKX3-1
TP53I3
SF3B6
STOML2
GNG8
ZNF200
PIGO
CCNG1
FECH
COPG2
MPC1
POLR2M
B3GALNT1
ZNF738
LSS
NDUFAF1
FRZB
FIS1
CLDN15
C14orf39
PDHX
APIP
USP33
PRPH2
CLPX
CYSTM1
TMEM231
SLC2A11
PAF1
INPP5K
MAP1LC3B
FBXO31
ADCY6
KIF3A
XPC
LSM3
HINT3
CCNI2
MESP1
TMPPE
GLB1
SLC9B2
NPY1R
UFL1
KLF1
GCDH
DNASE2
PIGF
CRIPT
ZMYM6
PSMA6
NME9
NFKB2
AOX1
TM2D3
PPM1A
SCAF8
PFDN4
UBE2D1
SIAH2
RAD51AP2
STK32C
LAMA2
H4C7
H3C7
ACAP2
H2BC17
H2AC17
OR2B2
ABTB2
HERC4
TSSK4
A1BG
ZNF497
TRIM37
TM9SF1
SRSF1
NEDD9
MEFV
IPO4
FER
DNAJC25-GNG10
DNAJC25
HBEGF
C9orf85
ABHD17B
GFOD1
TMEM50B
IL6R
TMEM220
FGF9
RPS4X
UTP3
RNF141
WDR59
TUBA1A
TRIM26
CSNK1D
LOC100287896
LIPT2
URB2
TAF5L
RNF38
UROS
BCCIP
NOTCH2NLB
GNG11
PLK2
DGAT2
NUP35
MATN1
ZNF518A
TMEM168
ACP6
CEP85
PLGRKT
CMTR2
TMEM116
HAT1
ERP29
COX6C
ITPKB
CPEB2
SLC25A46
GUF1
GPI
COX5A
KLC2
CCL21
UMAD1
C1QTNF6
TAPBPL
CD27
SPAST
CIZ1
FKBP9
SNED1
DNM1
SMPD2
PPIL6
SC5D
SCAND1
GLYATL1
TNFRSF14
DCAF12
MPHOSPH8
CNEP1R1
ZNF287
ZNF264
TGFB1I1
DENND1B
IFNAR2
PLPP1
SP7
SEPTIN7
EIF3M
EXOC5
AP5M1
CACNA1S
ASCL5
AATF
PA2G4
SETSIP
HSPA4
EIF4E
BTBD8
SVIL
ZNF101
ATP13A1
UBQLN1
C2orf69
CXADR
MAFB
NUDCD3
FIP1L1
RALGAPA1
SPRYD7
PDIA3
ZNF808
SORD
ZNF671
TMEM243
PNPLA6
GPR155
PDK1
CASD1
SMAP1
UBE2L6
DTNBP1
SYCP2
PPP1R3D
FAM217B
TDP2
ACOT13
SLC35A1
ZNF346
BMERB1
PCMTD1
TACR1
ZNF611
MFSD5
ITGAV
RELA
CAMTA1
PDIA4
AKAP13
PIK3R1
SPAG9
SELENOI
ADGRF3
DDX18
EPB41L5
DYNC2H1
RBP1
STARD4
SLC9B1
SH3BP5
GPR137B
UBE2Q1
CHRNB2
RNF150
RABIF
DCAF10
ARL4D
NOL7
FRMD5
SLC16A13
SLC16A11
VSNL1
CTNNAL1
ECI2
NBPF12
AKAP9
AGL
TMEM192
OXA1L
NSUN4
UVSSA
ANKRD9
XYLB
AHR
TMEM132A
ADAM15
TMEM109
PRPF19
ATG10
UBA5
ACAD11
POLR3F
DZANK1
CCDC38
AMDHD1
HSP90AA1
CPEB3
FAR1
DERL1
ACOT6
ZNF670
H2BC21
H2AC21
H2AC20
ITPRIPL1
NME6
MARCHF5
WDR20
SMC3
YRDC
C1orf122
SEMA4B
PPM1B
PIP4P2
SETD9
RPRD1A
RFC3
EIF3A
TENT5C
EEF1AKMT1
SCP2