ChIP-Atlas: Target genes

Potential target genes for HMGB1

Query protein: HMGB1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2765964 | HUVEC
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HMGB1's Target genes

◢ HMGB1: Average

◢ SRX10567335: HUVEC

◣ SRX2765964: HUVEC

◢ SRX10567327: IMR-90

◢ SRX10567329: IMR-90

◢ SRX10567331: IMR-90

◢ SRX10567333: IMR-90

◢ SRX3585704: Lung fibroblasts

◢ HMGB1: STRING

USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
KMT2A
GTF2IRD2B
EPHX1
USP17L22
USP17L21
USP17L20
USP17L12
NAA25
ZNF341
DEDD
MXI1
ANKRD40
FRG2C
COQ2
KATNBL1
SYT7
JRK
EIF4H
EPHB1
DOCK7
PRICKLE1
MCU
USP17L17
USP17L18
USP17L11
USP17L19
INO80D
BCAR3
TMEM245
RNF220
ZSWIM6
STK17A
CNIH1
FOXN3
SBNO2
USP17L15
USP17L13
R3HDM2
INHBC
NREP
ZNF839
LDB1
JPT1
SNX25
CFAP97
MARK2
NSFL1C
LDLRAD3
RPS19
CCN2
TSPAN10
NPLOC4
TCF4
CERS6
SMIM13
DUSP5
PEX7
SCAP
TES
TOP2B
PTBP1
ZNF595
UPF1
MYO1B
LMO4
EIF2AK4
VPS36
CKAP2
QSOX2
ATXN2
NUDT4
ARHGEF37
MFSD14B
MRFAP1L1
BLOC1S4
DNAJC25-GNG10
DNAJC25
MAML1
CEP68
RAC1
RHOB
SIK3
GALNT10
PPP3CB
HOXB8
HOXB7
HOXB6
YWHAQ
SLTM
PAM16
CHRNA5
NCOA5
MARVELD1
ITGB1
LRP12
TM9SF3
HHIP
ST7
LIMS1
PIK3CA
JMJD1C
ECE1
KDM3B
C7orf26
SOCS5
PIGX
CEP19
GPSM1
CARD9
SLC39A10
SGMS2
IBA57
UBE2S
MET
DNAJC21
GAGE2C
GAGE2B
GAGE2A
GAGE1
PARVA
SSU72
CALM2
SBSN
GAPDHS
HOXA4
HOXA3
PELI1
GRIK4
ZNF860
OSBPL10
KANSL1L
MOV10
GNAI2
WDR26
ID3
SPTAN1
FBXL7
ZFAND6
EID2B
EID2
GET4
RAD23B
VRK1
DENND4B
SH3D19
SRSF9
DYNLL1
ELL2
HDGF
FBXL13
ARMC10
DISP3
RALGAPB
AFAP1L1
FBXO30
VPS4A
EXT1
USP36
ZFPM2
NUDT4B
ATL2
NADK2
COA8
BAG5
ING1
CARS2
NUCKS1
MAP2K2
TRAK2
STRADB
SLC20A1
HEBP2
PHF20
CLTB
ITGBL1
SPTLC2
ZNF609
ZNF148
PANK3
ASXL1
UTP4
DERPC
CHTF8
ATL1
MAP4K5
PUF60
ARHGAP29
ZHX3
ESYT2
DYNC2I1
HECTD2
PRPF40B
MBD3
RMI2
ZBTB34
AHCYL2
RIC1
PREP
HHEX
FRYL
ECI1
USP3
MBTPS1
LHPP
C1QBP
PSD3
KRT10
ACVR2A
FAF1
CDKN2C
ACVR2B
ARNTL
TPK1
RASA4
MSRA
PLCB1
VCL
TAOK2
VPS26A
TBC1D8
ELK3
RAP2B
ETS1
POLG
PLCL2
PRSS23
USP17L10
CCSER2
BSN
RHBDF1
MPG
FHL2
SMARCD2
NEK7
ADNP2
ZSWIM4
PKD1
BASP1
SIRT1
CPSF6
TFAP4
H2AZ2
TRAPPC3
MAP7D1
CST4
BCAP29
YBX3
TSKU
RHOBTB1
PTPRA
NUDT3
SPDYE14
SPDYE10P
MAP1LC3B
FBXO31
LIN9
PURA
SEC24B
RAPH1
ARFGEF2
TRNP1
PINK1
TSPAN3
HDHD5
PDCD2
ST3GAL3
EIF4G1
ZC3H7A
DENND5A
PABPC4
MCC
UGCG
KLF9
RAP1B
RAB11FIP2
ARHGAP28
RAB4A
SMAD3
ARHGAP26
TOR1B
G3BP1
UBE2H
ZNF280D
AGFG1
ECHS1
NOXA1
LCOR
CRPPA
CHAMP1
CAPN1
LACTB
GCLM
FMNL2
TBC1D30
KIF3B
GIT2
ANKRD13A
SLC25A37
MTMR12
USP31
SNTB2
ADD1
RNF146
INPP5F
ZNF362
SETD7
TMX4
GCLC
TATDN2
ACTR10
CDCA4
AHCYL1
FAM222A
COLGALT1
RPS6KA5
DGLUCY
MTSS1
RSAD1
CHAD
FNTA
TMEM64
RALB
SLC4A7
SMAD4
UBE2J2
PHRF1
IRF2BP2
ROCK2
SNX5
MGME1
VPS13D
TMEM71
PHF20L1
IKZF2
ARHGAP42
HIVEP2
SNRK
CDR2L
OXR1
MSRB2
ARHGAP10
EIF3L
ANKRD54
YPEL1
RBFOX2
FBXL22
LRRK1
INPP1
TMEM255B
ADORA2B
TPM1
TERF2
SMURF1
DYNC2I2
RAD54L2
HSPG2
RARG
AP3D1
IDH2
TRIM44
CCND2
USP49
PDCD7
RGL1
SRSF4
GNB4
LPIN1
STXBP1
SHOC2
BBIP1
ZNF124
CHST11
ARID1A
C11orf91
VPS54
ARRB1
EDF1
TGFBR2
MAP3K3
D2HGDH
GAB2
PEAK1
HMG20A
ANXA4
UBE2D2
PKIA
AAK1
C7orf50
WDR1
SCRT1
DGAT1
HEXD
HIPK1
SVBP
ERMAP
ZFAND3
GATA2
FGD5
COPRS
SUMO2
CYP2U1
BZW1
VAMP3
METTL9
PTEN
KLLN
AKAP7
RBM17
TOMM6
PRICKLE4
FRS3
FXN
FAM83G
IGFBP4
UBAC1
ADAR
SASH1
JUP
GPR146
BPNT2
ATXN7L1
ABL1
EPM2A
TRPC1
HS1BP3
TNFRSF11A
DEK
FAM174C
CIRBP
PI4K2A
MORN4
MFSD14C
FOSL1
CCDC85B
THRA
MED24
BMP4
ZSWIM8
CHCHD1
NCOA6
SP1
STK39
JAK1
CDC42
NR3C1
UBXN2A
HINT1
NCOA1
RDX
ERGIC1
EPN1
CHST3
ZSWIM7
TTC19
GPCPD1
ARID5A
UST
FAM193B
CCDC117
MARCHF6
SEMA4D
PFN2
VARS1
MFSD12
PRR7
USP10
NT5C2
TTC7B
KCTD18
CIZ1
GRK2
WWP2
NOB1
OPN3
CHML
MAP4K3
PLPP4
TOMM40
TNIP2
TMEM211
UBP1
ODC1
TMEM181
TIRAP
CASTOR2
LUC7L
FAM234A
KRTAP12-3
KRTAP12-2
MSANTD2
CAPZA2
GXYLT1
UVSSA
THSD7A
MYO5A
TTLL11
PRKAR2B
TRIM65
MRPL38
EHD4
NIT2
VEZF1
TUBB6
CREG1
PTP4A2
RNF135
NXF1
KAT6A
GLRX5
DNMBP
CMTM8
DNAJB6
HERC2
ITSN1
CRYZL1
UNC79
BTBD7
BTG1
STK35
TACC1
FBXO33
NXN
GGA2
DEGS1
RNF169
NR5A2
UBE2E2
CMTM7
RNF103-CHMP3
RMND5A
SUN2
UBE2M
CHMP2A
SNAI1
RAB40C
KCTD2
ATP5PD
AP3M2
H2AZ1
DNAJB14
SDCCAG8
CEP170
PROX2
ZNF131
SPPL3
CD81
CCNI
TEX261
AFG3L2
OAT
YPEL2
BMPR1B
SMARCC1
UBE2E3
MAP3K14
ZNF639
WSB2
KPNA4
MROH1
HGH1
CLCC1
FLNC
XKR6
INF2
GTF2I
NAV1
DDAH1
FDX1
RAI14
LMO2
TRAP1
RAET1G
TAF4
ETS2
NDUFAF6
RNF216
SGK3
TSPAN5
GRK5
ILKAP
CSK
CSNK1E
ME2
DAP
FBXO10
KMT5B
ZFAND4
CXCL2
RAB7A
TOLLIP
MBD2
KTN1
ODF3L2
MADCAM1
COX20
DRAM1
PRKAG2
PLOD2
RNF4
BNIP3L
TMEM120B
CDK20
IER5
ZMAT3
SMARCA4
HACD2
ELK4
SFTPC
LGI3
BMP1
CDR2
KIF1B
TAPT1
SYPL1
HSP90AB1
LIG3
UBN2
SLC35B2
NFKBIE
AKAP12
LRRC37A3
RRAS2
SORBS1
ZNF513
SNX17
ORAI1
NAP1L4
BAZ1B
GNPTAB
YEATS2
TM7SF3
MED21
LGR4
GRAMD1C
NR2C2
KBTBD2
SFXN1
NRIP1
RALA
SPINDOC
TCEA2
GTPBP6
ARL5A
TP53INP1
KLHL5
MYO18A
ADCY6
COTL1
TRA2A
TPRN
TMEM203
NDOR1
DPP9
HESX1
APPL1
STK24
PABPC1
NFIA
MAP4K4
LIMS2
OAF
URGCP-MRPS24
URGCP
USP14
SEPTIN9
PRNP
NTAN1
GLI3
UCK2
ORAI2
PBRM1
GNL3
PPP6R1
FOXN2
KCTD5
ITGA6
ZNF511
TUBGCP2
RAB32
NUFIP2
RFXAP
MAPK6
LSM11
PRKCA
TLN1
CREB3
TRMT1
NACC1
NAMPT
RUFY1
FAM53B
CDV3
ZNF706
PCBD2
PACS2
BRF1
CD164
CSRNP2
TWF2
PPM1M
RRP36
MEA1
KLHDC3
ASAP1
RGMB
OSGIN2
BCAR1
ARHGAP17
ZNF771
POLR2J2
CCDC88A
CUL3
B4GALT5
FRAT2
XPO4
C7orf25
RALY
PHC1
MORC2
DCBLD1
CSF1
PREX1
CACHD1
ZCCHC3
C20orf96
XPO7
DOK2
UBE2D4
ANKRD13D
NFIB
NUTM2E
FAM241A
SMIM19
SLC20A2
MAP2
NEDD4
PTBP2
JADE1
EP300
CMTM3
DYNLL2
GPR160
THAP1
NRF1
RMC1
SEC14L2
RNF215
CYB5R3
ATP5MGL
C17orf58
P3H2
ZNF653
MEF2A
TMEM44
ATP11A
KRTAP10-9
KRTAP10-10
ACTB
IRAK3
POLR3GL
LRIG3
LIX1L
ANKRD34A
RELA
B3GLCT
TRPS1
HPCAL1
TLCD5
NELFCD
POLDIP3
GID8
DIDO1
CRTAP
IL17RC
STX11
UNC5B
PEX10
GDF11
PER2
BAHCC1
PRSS27
CHFR
SYNJ2
ARHGEF12
PTGES2
ENDOD1
EXOC6
NAA38
CHD3
CAST
SKIDA1
AKT2
DOK4
ANKLE2
SCOC
PAIP1
FAM107B
NUDT19
CHIC2
RHEB
PITPNA
EIF5
STAG1
GNG12
FCHO2
UHRF2
PANK2
TRAF7
RAB26
TRAF3IP1
PRKD3
HNRNPAB
KCNC1
SLC35E1
MAPKAPK5
DHX30
OR10G7
ZMYM4
XXYLT1
DONSON
TNFAIP3
MAP1B
RXYLT1
NIPSNAP2
SPRING1
RNFT2
CTCF
TP53INP2
DIS3L
SUSD6
CSRNP1
MKRN1
TCTEX1D4
PLK3
BTBD19
YWHAH
C22orf24
KANSL3
FER1L5
TBC1D12
MCMBP
C9orf72
WTAP
SOD2
YBEY
MCM3AP
FKBP9
ATP11B
TRRAP
TMEM130
PLXNA4
UTP11
FHL3
C1orf198
OR2A42
OR2A1
EPB41
LRRFIP1
JADE2
USP24
TKT
KDM4B
GPRIN1
ZYG11B
GLS
PHF19
NRG1
ZMIZ1
CACNA2D1
CEP170B
ERRFI1
PITPNM2
FOXP1
HDAC7
CRTC3
PELI2
FAM160B2
TMEM131
DDHD2
B3GNT2
CHMP5
BAG1
SERF1B
SERF1A
SRF
ZFHX3
LUZP1
STK40
RPL6
PTPN11
RIPOR1
TAF5
TUBB4B
STPG3
FAM166A
SNX2
SLC12A2
FAM171A2
SLC12A9
PODXL2
ARIH1
HLF
EPHB4
SLC16A1
POLR3H
SLC27A4
FANK1
ACTR1B
HSP90AA1
ZNF445
TXNDC16
GPR137C
LETM1
SAMD13
CDC42BPB
ARHGEF7
B3GALT1
PROS1
ARL13B
NOCT
CAMSAP2
RAB21
AMMECR1L
WDR53
FBXO45
INAFM2
TMA7
CCDC51
ATRIP
LRRC8B
RFX3
FNIP2
ATOH7
MAPK1
BACH1
CAPN5
OSBPL5
TMEM80
DEAF1
CSGALNACT2
ZBTB24
SNRPD1
PTX3
COQ10A
ANKRD52
ZNF668
ZNF646
HYI
DICER1
PHC2
METTL23
JMJD6
TUBB2A
SEMA3F
SRSF2
MFSD11
TMCC1
MTHFD1L
RILPL1
FAM168B
RPUSD1
CHTF18
HMGN1
DENND1B
CCDC138
RAP1GDS1
LRRC8D
OSBP
AGO3
NRG2
PODXL
XKR7
RAB12
TTLL12
SPATA1
GNG5
SMYD2
SLC35D2
TMEM259
CNN2
ANKRD36B
DTD1
B3GNT5
SPIN1
DPYSL2
UBE2Z
ANKRD9
ASAP2
MLLT6
ARHGEF28
ELAC1
TAC4