ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11605390 | UiPSM
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◢ SRX026264: Caco-2

◢ SRX9964512: Caco-2

◢ SRX9964513: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX15207281: hESC derived pancreatic cells

◢ SRX15207282: hESC derived pancreatic cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◣ SRX11605390: UiPSM

◢ SRX11605391: UiPSM

◢ CDX2: STRING

MTRNR2L1
FRG2C
EEF1A1
SOX2
KLF4
POU5F1B
POU5F1
COL23A1
FRG2
OR2T1
DUX4
FAM86B1
CRYAA2
CRYAA
SKA2
PRR11
MEX3C
ITSN1
CRYZL1
RBIS
PGAP2
OSBP
NOCT
RMI1
HNRNPK
AGBL3
TPR
ODR4
EIF2AK3
THG1L
DNAJC27
PNPLA8
ENSA
DNM2
HOXA4
HOXA3
HOXA5
ZNF140
TMEM53
ARMH1
MAPK7
B9D1
RBM15
ATF7-NPFF
ATF7
ATG10
PURB
PDIA4
TMEM242
DLD
MLH1
EPM2AIP1
CAMTA1
OSGIN1
ZNF333
SCAF1
RRAS
ZBTB26
STRAP
RBM27
NUDCD1
PBX3
MIER1
DNAI4
ASF1B
ARL13B
PPP2R1A
PCLO
OGDH
HDGFL2
COL5A2
BRMS1L
DIMT1
AHCTF1
STAT3
SEC23B
GTPBP1
TMBIM4
JOSD1
C10orf143
COQ10B
ZNF799
ZDHHC5
SP1
IKBIP
APAF1
YTHDF2
FAM98A
RAB5B
CD55
UTP18
MBTD1
RWDD1
NEK2
HOXB3
HOXB4
SUCO
MAD2L1
SETD3
CCNK
TIPARP
NMT1
DCAKD
HSPA13
TMEM230
SPAG7
HNRNPD
DNAJC9
WDR89
CBLL1
JAK2
TOM1L2
DRC3
ZBTB5
COQ7
FAM160A2
TIAL1
CNGA4
DMXL1
SNX14
HOMEZ
JMJD1C
INSIG2
MXD1
KMT5C
USO1
ARHGAP19
RAP2A
PAPOLA
C5orf51
CDK19
AMD1
MCM3
SLC39A10
FBXO30
ING4
CANX
EVI5L
MLEC
OGFOD1
NUDT21
MTRNR2L2
MSH3
DHFR
HERC4
TSTD2
NCBP1
SRGAP2B
FAM72D
FAM72C
MAP3K3
LCORL
PABPN1
SLC35B4
PARP2
RRM2B
ETF1
TMEM60
PHTF2
SLC33A1
HMGCS1
SKAP2
MTR
USP17L20
USP17L21
USP17L18
USP17L12
USP17L11
AP3S1
FAM161B
COQ6
USP15
HNRNPL
PWWP2A
ZNF891
ZNF10
GOLGB1
TRIM23
TRAPPC13
SHLD3
CNOT3
ZNF25
FBXO5
CNNM2
TRIQK
IDI1
TFB1M
SDK2
DCP1A
CNOT1
RSU1
CCDC138
G3BP1
SUPT3H
SRGAP2C
FAM72B
SGCE
PEG10
INVS
ERP44
RABGEF1
TP53RK
SLC13A3
HOXB8
HOXB7
SLC25A28
MBD4
IFT122
THAP5
DNAJB9
USP1
TMEM106B
SMYD3
DDX42
CCDC47
SETDB2
CAB39L
C9orf85
ABHD17B
THAP9
SEC31A
PPP1R12A
POLD2
FRG1
TIGD4
ARFIP1
ZNF143
TCAF1
SLC25A46
KMT2A
SNX12
ZFP64
HOXC5
ZNF76
CDK5RAP3
C20orf204
MALRD1
C1orf100
TSPAN3
HSPE1-MOB4
HSPE1
HSPD1
HOXC6
USH1C
DUT
OR9Q2
GFOD2
RBBP8NL
CYP2R1
RHOH
MEP1A
LGALS3
HOXB5
CXCL9
ART3
DESI2
WBP4
ELF1
AP1M1
GBF1
CREB3L1
RARB
SF3B4
MTMR11
RGMB
SLC30A10
ISX
CCDC200
GUCY2C
NFKBIZ
RIN2
KRT8
CD300LF
CHI3L1
ZNRF3
LECT2
WDR74
TRIM2
HK1
CERK
INTS9
HMBOX1
EPRS1
FGG
LRRC19
CA4
JAML
HES1
CDX1
HOXC4
PHYHIPL
IGSF23
KIAA2012
PRSS41
USP54
PRICKLE1
PDE6A
SPATA46
C1orf226
KCNE3
CDH17
MEIS1
ZBTB45
HKDC1
UGT1A1
NTF3
HNF4G
TMEM107
SI
TFAP2A
PDZRN3
FGB
RNASE6
LUC7L3
GSTP1
CD244
PMEPA1
QSOX1
TOMM40L
APOA2
ANKRD40CL
KRTAP3-1
FAM20A
FCAMR
SLC7A6
SLCO2B1
MTCL1
AMACR
FBXO31
FHL2
PKP2
PI3
PAM
SLC20A1
DNAJC25-GNG10
DNAJC25
RAMP1
NAA20
CEACAM16
PIGR
SLC6A7
MAMDC2
SLC12A2
GOLIM4
NAPEPLD
C2orf88
CFC1
DUSP18
LOC102723996
ICOSLG
LAMA3
SMIM10L1
PRH1-TAS2R14
SERPINB1
C3orf52
CLRN3
CDC14A
TGIF1
SLC25A27
CYP39A1
TMEM45B
WWC2
TBPL1
ZNF608
LRRC66
QSER1
SYBU
MGAT4A
RGS2
ADD3
NOS2
EIF4G3
AP2S1
CAST
HNMT
SPAM1
RAB6D
GSG1
HAND1
TSPAN8
MAP3K14
KIAA1217
SPRED2
REG4
GCNT4
DEPP1
SMG7
STX16
FGFBP1
WWC1
B3GNT6
FLNB
PDE4D
LRP2
MACC1
LRIG3
RNPEP
GRAMD2B
TES
HEPH
WDR77
ATP5PB
LOC388282
KIFC3
WNT5A
ALG10
NR6A1
RNF114
TMCO3
DCUN1D2
YAP1
MS4A18
RNF145
SEH1L
PLEKHG1
TMEM141
TDRD1
CCDC186
CYTH3
INTS4
SIRT4
COBLL1
VIL1
UGT2B10
SH3D19
ZC3H15
MAVS
SERPIND1
MYRF
RPUSD4
FAM118B
GGT1
RBM25
ZNF226
SULT2B1
CFAP221
TBL1X
ST6GALNAC4
GSDMB
AKAP9
ZNF563
MIA3
GSN
ZZEF1
CYB5D2
TUT1
IQGAP2
VSX1
HOXB9
ACOX2
CELA3A
DUS4L-BCAP29
DUS4L
COG5
ALS2
PES1
CCDC90B
GEM
ARHGAP17
CDK11A
FAM53B
PRR15L
TOE1
MUTYH
JMY
CASP4
HACD2
GGH
ZNF3
SNTB1
TBX4
INAVA
ARHGAP45
MARCHF8
KCNIP2
TATDN3
NSL1
PTPRF
ABLIM1
TFPT
PRPF31
SGK3
FABP1
LNX1
TMEM69
GPBP1L1
PERCC1
KIF16B
ARHGEF12
MRPL44
RNF43
ATF3
E4F1
SLC17A4
NUF2
TNFSF15
SEMA3C
GTPBP6
SELENON
OR10AD1
ERLIN2
ROCK2
PRKCZ
TMEM87B
UBR2
ALDH3A2
HEXIM2
TOB1
STK32C
LRRC27
ADGRE5
NXPE1
ADNP
STAM2
SPINK1
MYO18B
SCT
CDHR5
CTSK
SEC23A
MAP1LC3B
IFRD1
ANKRD27
RGPD2
USP7
SLC26A2
HOXC8
H4C12
NNAT
HESX1
BLCAP
APPL1
TMPRSS4
SMCHD1
SLC22A2
CCDC59
TARDBP
MCTS1
FAM107B
MRPS23
TSPAN12
WASHC1
TXNRD1
MICAL2
EPHX2
CGGBP1
CXCL2
RAB14
LMO7
CDK5RAP1
NXPE2
TM4SF4
PPM1L
FOXN3
UBB
SFR1
COX20
PIK3C2A
TLE3
DEPDC7
MATR3
C3orf85
CPS1
NWD1
PPIL3
NIF3L1
NFAT5
MBNL2
COX19
RBM47
COX16
ADGRF4
SALL4
CDK11B
ALG10B
KRTAP4-2
KRTAP4-1
CDON
REG3A
CIDEC
TMEM54
RIC8B
PDXDC1
HNF4A
REG1B
MMACHC
CCDC163
ABR
MTRNR2L8
ZHX3
GBA
TAOK3
DLX4
MIDEAS
PITX3
RABEPK
CASP5
ATL3
KRT19
SOX30
C5orf52
KLHL30
UTP3
YWHAZ
PPARG
TPD52
RGPD1
PSMD3
HSP90B1
CEP126
ANGPTL5
TBC1D30
ZNF248
STAT1
RNF186
AKR1C3
METTL15
KIF18A
IL33
ETFB
NR0B2
RTN4
PAK1
PRDX6
TM7SF3
LIMA1
IGFL4
CTSB
ZMPSTE24
DLAT
ENGASE
AJUBA
RGPD6
TPCN1
SRI
GTPBP4
UTS2R
PRSS3
CALML4
SCAF11
MGAM2
ATP2B4
ZNF503
KHSRP
LDHAL6A
ELAPOR2
SMC2
RNF31
PSME2
ARF6
ACVR1B
PRKAB2
KPNB1
EIF3D
PREPL
CAMKMT
C19orf33
CLGN
CASC3
ACAN
RFLNA
PHF19
CDC14B
BCL10
MKX
NPIPB5
PLAAT2
HOXA9
HOXA7
ZNF341
INTS5
SPATA2
MRPL21
IGHMBP2
BCAS1
ARHGDIB
TNFSF11
RMDN2
FARSB
ARHGAP27
TTI2
NPIPB4
NPIPB3
ANO4
ZFP62
SGO2
TDP2
SGCB
ACOT13
NEBL
MLF1
LOC102723360
AMOTL2
CRYM
ARHGEF18
THAP1
MPP6
PKIB
HMOX1
EBAG9
SLC12A3
PTPN6
C12orf57
ZCCHC8
OSBPL1A
ADAP1
LDLRAD4
RAD54B
LRRC59
KRT20
FSBP
TMED9
PDCD6IP
WWC3
PDZK1
KNL1
ME3
GPATCH1
BCL2L1
CLIC5
ZCCHC14
FNBP4
FAM135A
MED13L
NR5A2
CEP120
SLC45A4
CDCA8
C1orf109
SHF
NRAS
H3C15
H3C14
H2AC19
H2AC18
NSFL1C
IL34
TMEM205
CCDC159
SLC4A9
NT5DC4
SH3TC2
TMC7
MOB4
LRRC31
KMT2D
AKTIP
UGT2B7
CNNM3
NOSTRIN
ANK3
PPP1R3D
FAM217B
RTTN
SLC3A1
PRAG1
C3orf38
SP2
NDE1
MARF1
ZC3H10
STX1A
RPL41
CYTIP
SLC51B
NT5C3A
CACNA1D
NPIPB13
NPIPB12
BANP
NCOA5
MBIP
ZNF721
TCF20
RAB3C
PRDM4
PIGG
NGB
IBTK
CPLX2
SLC12A7
RAG2
LASP1
CLDN4
TSSC4
EIF3F
TRIB1
TMEM170A
NFE2L2
RGPD8
RGPD5
CLOCK
CELA3B
ZNF91
CFC1B
TINAG
PHACTR4
VIPAS39
AHSA1
ADARB1
PCK1
MLPH
BTNL3
RNF24
ZW10
INHBE
BBS1
TRIM15
TRIM10
IRF2BP2
CALM2
CAAP1
EMP1
CMTM1
CACNB2
CACHD1
ARID5B
NCOA4
GNA14
FUT2
PPIP5K2
GIN1
MINDY3
ZNF552
SNX5
SNX17
MGME1
EIF2B4
MME
ANTXR2
TAPT1
SORL1
VTA1
NMBR
CLDN12
TCN2
ACCS
DKK1
CRLF3
CLCN3
S100A2
HPGD
FBN2
ECT2
EHBP1
TM2D2
HINT1
CBLB
ADAM9
CDK12
ANKRD17
TTLL6
NSRP1
CALR3
C19orf44
SIX1
RNF7
EMC9
BCAP29
PPP1R3A
FEM1A
SLC11A2
ID1
CCNJL
ARHGEF38
FURIN
SHOX2
RSRC1
RAPGEF6
ANXA11
UCK1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SVIL
LENG9
DNMBP
UBAP2L
KREMEN1
C1orf43
PEX3
ADAT2
PRPF19
KBTBD8
ZNF577
USP17L22
POLR2J3
METRNL
H4C15
H4C14
WDFY1
TARBP2
SERP2
OIP5
NUSAP1
MAP3K12
FGF1
SDHAF3
EHF
COG3
WASHC3
FOXJ3
ZSWIM5
PIH1D1
CRYBG1
ALDH16A1
NNMT
B4GALT6
CLIC4
CAPN2
USP6NL
ICE1
G3BP2
MED13
GALK1
PHLDB2
KHDRBS3
DOCK6
GALNT1
AMN1
CHD2
BCAR3
PLA2G6
NOP16
HIGD2A
CFL1
UEVLD
CAMK2G
ZNF501
ACSF2
TMED7-TICAM2
TMED7
H4C11
CTH
TMEM126B
OPRL1
LKAAEAR1
ETFBKMT
DLG2
TCF12
PTPRB
PPME1
POC1A
DNPEP
C2CD3
SPAAR
MRPS16
ZSWIM3
HIKESHI
ACOT8
MADD
AP3S2
YAE1
SMG1
ZNF510
FBXO48
APLF
ZKSCAN1
LRRC4
GPR171
TOR1AIP2
SOWAHC
SF3B5
LGALS4
EIF4A2
ZCWPW2
USPL1
HSD17B7
HMGB1
FAM168A
CTTNBP2NL
CHKA
AZI2
PTPRR
RAB5A
MDP1
EFHB
CHMP4A
PIBF1
DIS3
DDX23
BARX2
PIK3AP1
NDUFS7
KLF5
CDX2
STARD3
PPP1R1B
NAGLU
ETHE1
SMTN
RDH11
USP30
CDR2
TUBG2