ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9964513 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◢ SRX026264: Caco-2

◢ SRX9964512: Caco-2

◣ SRX9964513: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX15207281: hESC derived pancreatic cells

◢ SRX15207282: hESC derived pancreatic cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ SRX11605390: UiPSM

◢ SRX11605391: UiPSM

◢ CDX2: STRING

KMT2A
SNX12
ZFP64
HOXB3
HOXB4
HOXC5
HOXC6
MALRD1
CDK5RAP3
C20orf204
ZNF76
C1orf100
GFOD2
COL5A2
FRG2C
HOXB5
ZNF143
SF3B4
MTMR11
RIN2
HSPE1-MOB4
HSPE1
HSPD1
OR9Q2
DUT
TSPAN3
FAM20A
PDZRN3
FGG
DUX4
HOXA3
HOXA5
USH1C
LECT2
LGALS3
HOXB8
CFC1
MEP1A
SI
CA4
NAA20
IGSF23
NEK2
PHYHIPL
GBF1
RARB
FRG2
PRICKLE1
NTF3
GSTP1
PI3
SEH1L
ISX
GUCY2C
RHOH
CYP2R1
WBP4
ELF1
VIL1
TLE3
WNT5A
RBBP8NL
MTCL1
SELENON
RGMB
KIAA2012
HAND1
JAML
PAM
LUC7L3
SLCO2B1
DNAJC25-GNG10
DNAJC25
PKP2
CDON
MEIS1
CD300LF
KCNIP2
MGAT4A
GCNT4
SLC20A1
COBLL1
TMEM45B
HK1
HOXB9
CHI3L1
CACNA1D
B3GNT6
TGIF1
SLC30A10
COL23A1
CDH17
TRIM2
DHRS3
ALDH3A2
AIG1
SMIM10L1
PRH1-TAS2R14
DESI2
GRAMD2B
GSG1
CDX1
FAM53B
INHBE
PERCC1
CFAP221
HOXC8
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SLC7A6
TMED9
IL36RN
IL36B
FGB
MTRNR2L1
CD244
DUSP18
AP1M1
CFC1B
RNPEP
STK32C
LRRC27
PDE6A
CXCL9
ART3
CERK
SPATA46
C1orf226
HOXC4
GOLIM4
LMO7
KREMEN1
HNRNPH2
CAST
DLX4
USP54
HNF4G
SERPIND1
C2orf88
SVIL
ZHX3
WWC2
TMEM141
MS4A18
CYTH3
USP17L20
USP17L22
PRSS41
RNASE6
REG4
OR10AD1
KRTAP3-1
NR6A1
TBX4
RNF43
CREB3L1
CLDN1
TMC7
NSUN4
FBXO31
LRRC66
COX19
CYP2W1
TSPAN12
MS4A4A
ADD3
MGAT5
MED13L
HSD17B7
FAM161B
COQ6
TDRD1
CCDC186
SOWAHC
IRAK2
WDFY1
NOS2
HKDC1
LDHD
UGT1A1
ATE1
BNIP5
NFKBIZ
HNMT
EMP1
SULT1A2
NAGLU
TMIGD1
USP17L21
USP17L18
USP17L12
USP17L11
SOX9
KDM8
LETM1
AMACR
PPM1L
MPP6
KRT8
OPRL1
LKAAEAR1
NAPEPLD
C3orf52
ZNRF3
LRRC19
RELL2
HDAC3
LOC388282
KIFC3
GAS2
VDR
TNFSF15
AFP
GLYATL1
EIF4G3
HES1
HMOX1
HEPH
CPS1
RMDN2
LOC102723360
WWC3
SIX1
TRMT61A
CKB
ALS2
SLC22A2
ADCY5
SPINK1
APELA
SLC12A2
RNF145
EPO
EPHX2
PLEKHG1
RNF7
MICAL2
LAMA3
SLC51B
HSD17B6
EPRS1
ARHGAP10
USP17L15
GGT1
GPATCH1
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
PDZK1
FAM234B
CAPRIN2
EVPL
ST6GALNAC4
SNTB1
IL1R1
LRP2
STAM2
KCTD18
PRR15L
TINAG
DLC1
CLRN3
FAM107B
TMEM60
PHTF2
MYRF
FOXN3
SLC6A11
PRDX6
CCDC200
RAMP1
PDXDC1
SORBS1
RFWD3
CERKL
TATDN3
NSL1
TDP2
ACOT13
COG3
APPL2
NR5A2
SERPINB1
ARF6
METRNL
C16orf54
TMEM52B
OLR1
CEACAM16
CRYGC
CRYGD
SRI
AKAP9
UTS2R
TANK
C2orf72
JMY
EGLN1
BCL2L1
TGOLN2
SOCS3
ZFAND2A
YAP1
GAGE8
GAGE2E
GAGE2D
GAGE13
MAP1LC3B
NCOA1
TOE1
MUTYH
NNAT
BLCAP
TAOK3
EEF1A1
WDR74
INTS9
HMBOX1
SOX2
KCNE3
ZBTB45
KLF4
TMEM107
TFAP2A
PMEPA1
QSOX1
TOMM40L
APOA2
ANKRD40CL
POU5F1B
FCAMR
FHL2
PIGR
SLC6A7
MAMDC2
HOXA4
LOC102723996
ICOSLG
CDC14A
SLC25A27
CYP39A1
TBPL1
ZNF608
QSER1
SYBU
RGS2
AP2S1
POU5F1
SPAM1
RAB6D
TSPAN8
MAP3K14
DCP1A
KIAA1217
SPRED2
DEPP1
SMG7
STX16
FGFBP1
WWC1
FLNB
PDE4D
MACC1
LRIG3
TES
WDR77
ATP5PB
ALG10
STAT3
RNF114
TMCO3
DCUN1D2
INTS4
SIRT4
UGT2B10
SH3D19
ZC3H15
MAVS
RPUSD4
FAM118B
RBM25
ZNF226
SULT2B1
TBL1X
GSDMB
ZNF563
MIA3
GSN
ZZEF1
CYB5D2
TUT1
IQGAP2
VSX1
ACOX2
CELA3A
DUS4L-BCAP29
DUS4L
COG5
PES1
CCDC90B
GEM
ARHGAP17
CDK11A
CASP4
HACD2
GGH
ZNF3
INAVA
ARHGAP45
MARCHF8
PTPRF
ABLIM1
TFPT
PRPF31
SGK3
FABP1
LNX1
TMEM69
GPBP1L1
KIF16B
ARHGEF12
MRPL44
ATF3
E4F1
SLC17A4
NUF2
SEMA3C
SLC33A1
GTPBP6
ERLIN2
ROCK2
PRKCZ
TMEM87B
UBR2
HEXIM2
TOB1
ADGRE5
NXPE1
ADNP
MYO18B
SCT
CDHR5
CTSK
SEC23A
IFRD1
ANKRD27
RGPD2
USP7
SLC26A2
H4C12
HESX1
APPL1
TMPRSS4
SMCHD1
CCDC59
TARDBP
RAB5B
MCTS1
MRPS23
WASHC1
TXNRD1
CGGBP1
CXCL2
RAB14
CDK5RAP1
NXPE2
JMJD1C
TM4SF4
UBB
SFR1
COX20
PIK3C2A
DEPDC7
MATR3
C3orf85
NWD1
PPIL3
NIF3L1
NFAT5
MBNL2
RBM47
COX16
ADGRF4
SALL4
CDK11B
ALG10B
KRTAP4-2
KRTAP4-1
REG3A
CIDEC
TMEM54
RIC8B
HNF4A
REG1B
MMACHC
CCDC163
ABR
MTRNR2L8
GBA
MIDEAS
PITX3
RABEPK
CASP5
ATL3
KRT19
INSIG2
SOX30
C5orf52
KLHL30
UTP3
YWHAZ
PPARG
TPD52
RGPD1
PSMD3
HSP90B1
CEP126
ANGPTL5
TBC1D30
ZNF248
STAT1
RNF186
AKR1C3
METTL15
KIF18A
IL33
ETFB
NR0B2
RBM15
RTN4
PAK1
TM7SF3
LIMA1
IGFL4
CTSB
ZMPSTE24
DLAT
ENGASE
AJUBA
RGPD6
CRYAA2
CRYAA
TPCN1
NUDCD1
GTPBP4
PRSS3
CALML4
SCAF11
MGAM2
ATP2B4
ZNF503
KHSRP
LDHAL6A
FAM86B1
ELAPOR2
SMC2
RNF31
PSME2
ACVR1B
PRKAB2
KPNB1
EIF3D
PREPL
CAMKMT
C19orf33
CLGN
CASC3
ACAN
RFLNA
PHF19
CDC14B
BCL10
MKX
NPIPB5
PLAAT2
HOXA9
HOXA7
ZNF341
INTS5
SPATA2
MRPL21
IGHMBP2
BCAS1
ARHGDIB
TNFSF11
FARSB
ARHGAP27
TTI2
NPIPB4
NPIPB3
ANO4
ZFP62
SGO2
SGCB
NEBL
MLF1
AMOTL2
CRYM
ARHGEF18
THAP1
PKIB
EBAG9
SLC35B4
SLC12A3
PTPN6
C12orf57
ZCCHC8
OSBPL1A
ADAP1
HMGCS1
LDLRAD4
RAD54B
LRRC59
KRT20
FSBP
PDCD6IP
TMEM230
G3BP1
KNL1
GOLGB1
EIF2AK3
ME3
CLIC5
ZCCHC14
FNBP4
FAM135A
CEP120
SLC45A4
CDCA8
C1orf109
SHF
NRAS
H3C15
H3C14
H2AC19
H2AC18
NSFL1C
IL34
TMEM205
CCDC159
THG1L
SLC4A9
NT5DC4
SH3TC2
WDR89
SCAF1
RRAS
MOB4
LRRC31
KMT2D
AKTIP
UGT2B7
CNNM3
NOSTRIN
ANK3
PPP1R3D
FAM217B
RTTN
SLC3A1
PRAG1
C3orf38
SP2
NDE1
MARF1
ZC3H10
STX1A
RPL41
CYTIP
NT5C3A
TMEM242
NPIPB13
NPIPB12
BANP
NCOA5
MBIP
ZNF721
TCF20
RAB3C
PRDM4
PIGG
NGB
IBTK
CPLX2
SLC12A7
RAG2
LASP1
CLDN4
TSSC4
EIF3F
TRIB1
TMEM170A
DNM2
NFE2L2
RGPD8
RGPD5
CLOCK
CELA3B
ZNF91
PHACTR4
VIPAS39
AHSA1
ADARB1
PCK1
MLPH
BTNL3
RNF24
ZW10
BBS1
TRIM15
TRIM10
IRF2BP2
CALM2
CAAP1
CMTM1
CACNB2
CACHD1
ARID5B
NCOA4
GNA14
FUT2
PPIP5K2
GIN1
MINDY3
ZNF552
SNX5
SNX17
MGME1
EIF2B4
MME
ANTXR2
TAPT1
SORL1
VTA1
NMBR
CLDN12
TCN2
ACCS
DKK1
CRLF3
CLCN3
S100A2
HPGD
FBN2
ENSA
ECT2
EHBP1
TM2D2
HINT1
CBLB
ADAM9
CDK12
ANKRD17
TRIQK
TTLL6
PABPN1
NSRP1
CALR3
C19orf44
ZNF25
EMC9
BCAP29
PPP1R3A
FEM1A
DNAJC27
SLC11A2
ID1
CCNJL
ARHGEF38
FURIN
SHOX2
RSRC1
RAPGEF6
ANXA11
UCK1
LENG9
DNMBP
UBAP2L
OSBP
C1orf43
PEX3
CNOT1
ADAT2
PRPF19
KBTBD8
ZNF577
POLR2J3
H4C15
H4C14
TARBP2
SERP2
OIP5
NUSAP1
MAP3K12
FGF1
SDHAF3
EHF
WASHC3
FOXJ3
ZSWIM5
PIH1D1
CRYBG1
ALDH16A1
NNMT
EVI5L
B4GALT6
CLIC4
CAPN2
USP6NL
ICE1
G3BP2
MED13
GALK1
PNPLA8
PHLDB2
TPR
ODR4
KHDRBS3
DOCK6
GALNT1
AMN1
CHD2
BCAR3
PLA2G6
NOP16
ITSN1
HIGD2A
CRYZL1
CFL1
UEVLD
CAMK2G
ZNF501
ACSF2
TMED7-TICAM2
TMED7
H4C11
CTH
TMEM126B
SKA2
PRR11
ETFBKMT
DLG2
TCF12
PTPRB
PPME1
POC1A
DNPEP
C2CD3
SPAAR
MRPS16
RBIS
ZSWIM3
HIKESHI
ACOT8
MADD
AP3S2
YAE1
SMG1
ZNF510
FBXO48
APLF
ZKSCAN1
SRGAP2B
LRRC4
GPR171
FAM72D
FAM72C
TOR1AIP2
SF3B5
LGALS4
EIF4A2
ZCWPW2
USPL1
HMGB1
FAM168A
CTTNBP2NL
CHKA
AZI2
PTPRR
RAB5A
MDP1
EFHB
CHMP4A
PIBF1
DIS3
DDX23
BARX2
STRAP
PIK3AP1
NDUFS7
KLF5
CDX2
STARD3
PPP1R1B
ETHE1
DMXL1
SMTN
RDH11
USP30
CDR2
TUBG2
TSHZ1
NAA60
BCL9
BCAS4
ADGRG1
TOB2
TMEM106B
RAB30
MRE11
ANKRD49
ZNF384
RP1L1
HHLA2
BAHCC1
NUAK2
MYADM
KIF26B
GHITM
TEP1
PRR5L
CCDC150
SPOP
CD55
ATG9B
ABCB8
PRSS23
DDX59
CCNI
ZDHHC5
VILL
NHSL1
ITFG2
INTS12
HRH1
GSTCD
CSDE1
STT3A
SRP9
SRGAP1
PPM1B
OGT
CS
ARHGAP24
PHKG2
BCAS3
PIF1
MARK2
IFIT1B
GAS2L3
CYCS
ALDH7A1
DSC2
PPP3CA
PMVK
OGFOD2
ATP5F1B
SMG5
RRN3
MYO7B
MTF2
ZNF438
TMED5
KRCC1
FOXP1
ERGIC2
CCDC18
ANXA2
ZNF484
WEE2
DENND11
TSACC
RCOR3
PARP2
GLRA2
CCT3
ZBTB26
PSMD9
IFTAP
HPD
BATF
APBB2
TM9SF4
NPAS4
SLC38A1
RAB3D
MYH4
KLC1
FAR1
WDPCP
MDH1