ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9964512 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◢ SRX026264: Caco-2

◣ SRX9964512: Caco-2

◢ SRX9964513: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX15207281: hESC derived pancreatic cells

◢ SRX15207282: hESC derived pancreatic cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ SRX11605390: UiPSM

◢ SRX11605391: UiPSM

◢ CDX2: STRING

KMT2A
SNX12
HOXB3
HOXB4
HOXC5
CDK5RAP3
MALRD1
FRG2C
PHYHIPL
ZFP64
HOXA3
HOXA5
COL5A2
HOXB5
GFOD2
C1orf100
TSPAN3
DUX4
RHOH
USH1C
DUT
FRG2
SI
COBLL1
FGG
WNT5A
SF3B4
MTMR11
LECT2
OR9Q2
MEP1A
ZNF76
PAM
C20orf204
NAA20
PRICKLE1
IGSF23
SMIM10L1
PRH1-TAS2R14
MPP6
LUC7L3
RARB
MEIS1
RGMB
WBP4
ELF1
PDZRN3
FAM20A
ALDH3A2
MTCL1
GBF1
PITX3
PKP2
CFC1
WWC2
LGALS3
HOXC6
CFAP221
SLC12A2
TGIF1
CAST
LNX1
CDH17
LAMA3
FGB
SALL4
APELA
HAND1
SLC30A10
CA4
HOXB8
CYP2R1
RIN2
PI3
KREMEN1
NTF3
CYTH3
CXCL9
ART3
SERPINB1
ZNF143
HOXC4
ARHGEF16
CACNA1D
TRIM2
JAML
ZNRF3
SYBU
TM7SF3
SEH1L
RAMP1
MGAT4A
SLC7A6
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HEXIM2
TLE3
AMACR
NFKBIZ
COL23A1
ARF6
PPM1L
MS4A18
PDE4D
ALS2
TMED9
MYNN
ACTRT3
B3GNT6
HK1
SMCHD1
HNRNPH2
RMDN2
ERBIN
NAPEPLD
LOC389831
CDON
ANKRD30BL
LRRC66
HSPE1-MOB4
HSPE1
HSPD1
GGT1
SLC26A2
HOXB9
GSTP1
LOC388282
KIFC3
KCNIP2
ZFX
HNMT
G6PC2
TRAM1
STK32C
LRRC27
CDX1
PLEKHG1
C1GALT1
VIL1
UGT8
KRTAP3-1
CEACAM16
TMEM141
SLCO2B1
SELENON
IL36RN
IL36B
CHI3L1
USP54
GOLIM4
PHLDB2
NEK2
UGT1A1
NR6A1
QSER1
RBBP8NL
ZNF608
TMEM45B
REEP1
ISX
ADD3
TMCC1
RNASE6
PTP4A1
SULT1C4
ZC3H15
XYLT1
XXYLT1
CCDC198
EIF2S3B
SPATA46
C1orf226
HSD17B7
STAM2
AIG1
KRAS
MED13L
UGT2B7
NXPE1
DESI2
HOXC8
COX19
USP17L20
USP17L21
USP17L18
USP17L12
USP17L11
KIAA2012
PDE6A
PSMA1
PDE3B
CD244
MPPE1
AP1M1
DEPDC7
CD300LF
FABP1
TP53BP1
PRSS41
TAOK3
KSR1
TMCO3
DCUN1D2
INHBE
ZCWPW2
AZI2
TRMT61A
CKB
BTNL2
OAT
CITED2
REG4
PARD6B
CLRN3
TSPAN12
NDUFB4
LRRC19
PIGR
PRKCZ
HINT1
SHOX2
RSRC1
ARHGAP10
GRAMD2B
RNF145
PDXDC1
SLC51B
AFP
SPINK1
CSTF2T
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
PKIB
PRDX6
NCOA1
HES1
TBC1D30
ARID5B
MICU1
GAGE8
GAGE2E
GAGE2D
GAGE13
JMY
YBX1
MAPKAPK2
EPB41L3
CFHR5
INSIG2
B3GNTL1
GSDMB
TTLL6
HHEX
DLX4
SLC22A2
GAS2
ATP13A4
TMEM267
GUCY2C
TSPAN8
PDZK1
USP17L22
NR5A2
KRCC1
LETM1
HSPH1
ANXA2
MYRFL
CLDN1
OR10AD1
ACSF2
SRGAP1
TOE1
MUTYH
SHLD2
GLUD1
SUSD6
OR13G1
ENTPD7
C3orf52
C2orf72
KIAA1217
MAVS
DKK1
FAM234B
PTGR1
ARL1
CRYGC
CES5A
HNF4G
IGLL5
EPRS1
FJX1
ITPRID2
EHF
AKAP9
USP17L15
CSRNP3
SOX9
ZNF311
CFAP44
EPHX2
KRT19
MANSC1
TMEM52B
OLR1
SLC20A1
ANKRD36C
HOXD1
ARHGEF38
KDM8
DUSP6
MTRNR2L1
CREB3L1
CCDC200
KRT8
EEF1A1
WDR74
CERK
INTS9
HMBOX1
SOX2
KCNE3
ZBTB45
KLF4
HKDC1
TMEM107
TFAP2A
PMEPA1
QSOX1
TOMM40L
APOA2
ANKRD40CL
POU5F1B
FCAMR
FBXO31
FHL2
DNAJC25-GNG10
DNAJC25
SLC6A7
MAMDC2
C2orf88
DUSP18
HOXA4
LOC102723996
ICOSLG
CDC14A
SLC25A27
CYP39A1
TBPL1
RGS2
NOS2
EIF4G3
AP2S1
POU5F1
SPAM1
RAB6D
GSG1
MAP3K14
DCP1A
SPRED2
TMEM60
PHTF2
GCNT4
DEPP1
SMG7
STX16
FGFBP1
WWC1
FLNB
LRP2
MACC1
LRIG3
RNPEP
TES
HEPH
WDR77
ATP5PB
ALG10
STAT3
RNF114
YAP1
TDRD1
CCDC186
INTS4
SIRT4
UGT2B10
SH3D19
SERPIND1
MYRF
RPUSD4
FAM118B
RBM25
ZNF226
SULT2B1
TBL1X
ST6GALNAC4
ZNF563
MIA3
GSN
ZZEF1
CYB5D2
TUT1
IQGAP2
VSX1
ACOX2
CELA3A
DUS4L-BCAP29
DUS4L
COG5
PES1
CCDC90B
GEM
ARHGAP17
CDK11A
FAM53B
PRR15L
CASP4
HACD2
GGH
ZNF3
SNTB1
TBX4
INAVA
ARHGAP45
MARCHF8
TATDN3
NSL1
PTPRF
ABLIM1
TFPT
PRPF31
SGK3
TMEM69
GPBP1L1
PERCC1
KIF16B
ARHGEF12
MRPL44
RNF43
ATF3
E4F1
SLC17A4
NUF2
TNFSF15
SEMA3C
SLC33A1
GTPBP6
ERLIN2
ROCK2
TMEM87B
UBR2
TOB1
ADGRE5
ADNP
MYO18B
SCT
CDHR5
CTSK
SEC23A
MAP1LC3B
IFRD1
ANKRD27
RGPD2
USP7
H4C12
NNAT
HESX1
BLCAP
APPL1
TMPRSS4
CCDC59
TARDBP
RAB5B
MCTS1
FAM107B
MRPS23
WASHC1
TXNRD1
MICAL2
CGGBP1
CXCL2
RAB14
LMO7
CDK5RAP1
NXPE2
JMJD1C
TM4SF4
FOXN3
UBB
SFR1
COX20
PIK3C2A
MATR3
C3orf85
CPS1
NWD1
PPIL3
NIF3L1
NFAT5
MBNL2
RBM47
COX16
ADGRF4
CDK11B
ALG10B
KRTAP4-2
KRTAP4-1
REG3A
CIDEC
TMEM54
RIC8B
HNF4A
REG1B
MMACHC
CCDC163
ABR
MTRNR2L8
ZHX3
GBA
MIDEAS
RABEPK
CASP5
ATL3
SOX30
C5orf52
KLHL30
UTP3
YWHAZ
PPARG
TPD52
RGPD1
PSMD3
HSP90B1
CEP126
ANGPTL5
ZNF248
STAT1
RNF186
AKR1C3
METTL15
KIF18A
IL33
ETFB
NR0B2
RBM15
RTN4
PAK1
LIMA1
IGFL4
CTSB
ZMPSTE24
DLAT
ENGASE
AJUBA
RGPD6
CRYAA2
CRYAA
TPCN1
SRI
NUDCD1
GTPBP4
UTS2R
PRSS3
CALML4
SCAF11
MGAM2
ATP2B4
ZNF503
KHSRP
LDHAL6A
FAM86B1
ELAPOR2
SMC2
RNF31
PSME2
ACVR1B
PRKAB2
KPNB1
EIF3D
PREPL
CAMKMT
C19orf33
CLGN
CASC3
ACAN
RFLNA
PHF19
CDC14B
BCL10
MKX
NPIPB5
PLAAT2
HOXA9
HOXA7
ZNF341
INTS5
SPATA2
MRPL21
IGHMBP2
BCAS1
ARHGDIB
TNFSF11
FARSB
ARHGAP27
TTI2
NPIPB4
NPIPB3
ANO4
ZFP62
SGO2
TDP2
SGCB
ACOT13
NEBL
MLF1
LOC102723360
AMOTL2
CRYM
ARHGEF18
THAP1
HMOX1
EBAG9
SLC35B4
SLC12A3
PTPN6
C12orf57
ZCCHC8
OSBPL1A
FAM161B
COQ6
ADAP1
HMGCS1
LDLRAD4
RAD54B
LRRC59
KRT20
FSBP
PDCD6IP
WWC3
TMEM230
G3BP1
KNL1
GOLGB1
EIF2AK3
ME3
GPATCH1
BCL2L1
CLIC5
ZCCHC14
FNBP4
FAM135A
CEP120
SLC45A4
CDCA8
C1orf109
SHF
NRAS
H3C15
H3C14
H2AC19
H2AC18
NSFL1C
IL34
TMEM205
CCDC159
THG1L
SLC4A9
NT5DC4
SH3TC2
WDR89
TMC7
SCAF1
RRAS
MOB4
LRRC31
KMT2D
AKTIP
CNNM3
NOSTRIN
ANK3
PPP1R3D
FAM217B
RTTN
SLC3A1
PRAG1
C3orf38
SP2
NDE1
MARF1
ZC3H10
STX1A
RPL41
CYTIP
NT5C3A
TMEM242
NPIPB13
NPIPB12
BANP
NCOA5
MBIP
ZNF721
TCF20
RAB3C
PRDM4
PIGG
NGB
IBTK
CPLX2
SLC12A7
RAG2
LASP1
CLDN4
TSSC4
EIF3F
TRIB1
TMEM170A
DNM2
NFE2L2
RGPD8
RGPD5
CLOCK
CELA3B
ZNF91
CFC1B
TINAG
PHACTR4
VIPAS39
AHSA1
ADARB1
PCK1
MLPH
BTNL3
RNF24
ZW10
BBS1
TRIM15
TRIM10
IRF2BP2
CALM2
CAAP1
EMP1
CMTM1
CACNB2
CACHD1
NCOA4
GNA14
FUT2
PPIP5K2
GIN1
MINDY3
ZNF552
SNX5
SNX17
MGME1
EIF2B4
MME
ANTXR2
TAPT1
SORL1
VTA1
NMBR
CLDN12
TCN2
ACCS
CRLF3
CLCN3
S100A2
HPGD
FBN2
ENSA
ECT2
EHBP1
TM2D2
CBLB
ADAM9
CDK12
ANKRD17
TRIQK
PABPN1
NSRP1
CALR3
C19orf44
ZNF25
SIX1
RNF7
EMC9
BCAP29
PPP1R3A
FEM1A
DNAJC27
SLC11A2
ID1
CCNJL
FURIN
RAPGEF6
ANXA11
UCK1
SVIL
LENG9
DNMBP
UBAP2L
OSBP
C1orf43
PEX3
CNOT1
ADAT2
PRPF19
KBTBD8
ZNF577
POLR2J3
METRNL
H4C15
H4C14
WDFY1
TARBP2
SERP2
OIP5
NUSAP1
MAP3K12
FGF1
SDHAF3
COG3
WASHC3
FOXJ3
ZSWIM5
PIH1D1
CRYBG1
ALDH16A1
NNMT
EVI5L
B4GALT6
CLIC4
CAPN2
USP6NL
ICE1
G3BP2
MED13
GALK1
PNPLA8
TPR
ODR4
KHDRBS3
DOCK6
GALNT1
AMN1
CHD2
BCAR3
PLA2G6
NOP16
ITSN1
HIGD2A
CRYZL1
CFL1
UEVLD
CAMK2G
ZNF501
TMED7-TICAM2
TMED7
H4C11
CTH
TMEM126B
SKA2
PRR11
OPRL1
LKAAEAR1
ETFBKMT
DLG2
TCF12
PTPRB
PPME1
POC1A
DNPEP
C2CD3
SPAAR
MRPS16
RBIS
ZSWIM3
HIKESHI
ACOT8
MADD
AP3S2
YAE1
SMG1
ZNF510
FBXO48
APLF
ZKSCAN1
SRGAP2B
LRRC4
GPR171
FAM72D
FAM72C
TOR1AIP2
SOWAHC
SF3B5
LGALS4
EIF4A2
USPL1
HMGB1
FAM168A
CTTNBP2NL
CHKA
PTPRR
RAB5A
MDP1
EFHB
CHMP4A
PIBF1
DIS3
DDX23
BARX2
STRAP
PIK3AP1
NDUFS7
KLF5
CDX2
STARD3
PPP1R1B
NAGLU
ETHE1
DMXL1
SMTN
RDH11
USP30
CDR2
TUBG2
TSHZ1
NAA60
BCL9
BCAS4
ADGRG1
TOB2
TMEM106B
RAB30
MRE11
DHRS3
ANKRD49
ZNF384
RP1L1
HHLA2
BAHCC1
NUAK2
MYADM
KIF26B
GHITM
TEP1
PRR5L
CCDC150
SPOP
CD55
ATG9B
ABCB8
PRSS23
DDX59
CCNI
ZDHHC5
VILL
NHSL1
ITFG2
INTS12
HRH1
GSTCD
CSDE1
STT3A
SRP9
PPM1B
OGT
CS
ARHGAP24
PHKG2
BCAS3
PIF1
MARK2
IFIT1B
GAS2L3
CYCS
ALDH7A1
DSC2
PPP3CA
PMVK
OGFOD2
ATP5F1B
SMG5
RRN3
MYO7B
MTF2
ZNF438
TMED5