ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116460 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◢ SRX3010238: A549

◢ SRX3010239: A549

◢ SRX3010253: GM12878

◢ SRX3010254: GM12878

◢ SRX10476598: Hep G2

◢ SRX10476599: Hep G2

◢ SRX116459: hESC H1

◣ SRX116460: hESC H1

◢ SRX186642: hESC H1

◢ SRX6783963: hESC H1

◢ SRX6783964: hESC H1

◢ SRX8053100: MM.1S

◢ SRX8538839: NB-4

◢ SRX23740430: SUM 149PT

◢ SRX23740431: SUM 149PT

◢ SRX23740438: SUM 149PT

◢ SRX23740439: SUM 149PT

◢ SRX23740455: SUM 149PT

◢ SRX23740458: SUM 149PT

◢ SRX23740461: SUM 149PT

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

MTRNR2L1
KIF5C
MTRNR2L2
MSH3
DHFR
MAMDC2
MTRNR2L9
MTRNR2L10
RGPD2
RGPD1
MTRNR2L8
EMILIN2
PTPRN2
C1orf198
MTRNR2L6
DUX4
LOC102724770
DGCR6
NGB
CHID1
COL23A1
ACSL3
CNOT3
FRG2
NAGPA
GATB
SUMF1
ATG14
IDH3B
SPNS1
LAT
GPATCH3
GPN2
TSR3
GNPTG
CRBN
RBM48
PEX1
SFSWAP
EIF2D
ZNF830
CCT6B
TMEM208
LRRC29
ERAL1
GET3
UBE3B
TRMT1
NACC1
PDE6D
COPS7B
VPS50
HEPACAM2
TMEM242
NGDN
SPATA25
NEURL2
CTSA
PPWD1
CENPK
POLR3F
DZANK1
PSMB7
ZSWIM1
TMEM199
SEBOX
POLDIP2
RRP15
RBM19
SAP30BP
RECQL5
TOMM22
U2SURP
MRM3
GLOD4
SSNA1
ANAPC2
PEPD
SMG8
VIRMA
ZC3HC1
C8orf33
DNAJC11
FAM162A
CCDC58
BSDC1
HAX1
RGS14
LMAN2
CCDC59
MED6
MRPS15
IPO11
DIMT1
HEXA
TRMO
TIMM22
TOP3A
SMCR8
PLEKHN1
NOC2L
KLHL17
HAGH
FAHD1
VAC14
CDC23
SYF2
RPTOR
EIF3H
PMPCA
ENTR1
LAMP1
WASHC2C
EMC4
PRR5L
COMMD9
GABARAP
ELP5
CTDNEP1
ZFYVE26
RAD51B
GTF3C5
COMMD4
PPT1
POLR2J3
XAB2
STXBP2
PCP2
OAZ3
MRPL9
PACSIN3
ARFGAP2
PHF5A
ACO2
OSBPL9
VPS11
MRPL45
CDKAL1
PELP1
ARRB2
WDR48
SCN11A
SUPT7L
SLC4A1AP
EEF1E1
NDUFS3
KBTBD4
FAM180B
DBNDD2
TFPT
PRPF31
TAS1R1
NOL9
THRA
MED24
TSR1
SGSM2
ING4
UQCC1
CWF19L1
RBM42
TRIP4
PCLAF
ALKBH3
ATP5IF1
DNAJB12
C12orf43
TSR2
DUS2
DPEP2NB
DDX28
ERICH4
DMAC2
SMPD4
MZT2B
MRPS11
MRPL46
KRR1
LARS2
TRAPPC2L
GALNS
MRPS22
RTTN
TBC1D23
MRPL44
NUP214
SDE2
LIN52
ALDH6A1
WASHC2A
EIF3F
VPS33A
TPRN
TMEM203
NDOR1
TMEM41A
SLC7A6OS
PRMT7
ZNF789
ATP5MF-PTCD1
ATP5MF
SUPV3L1
METTL15
KIF18A
C16orf89
ALG1
URM1
TCTN2
SPTLC1
KAT8
BCKDK
SLC35B1
MRPL55
PISD
SLC25A26
MFN2
MRPL39
RBX1
RANBP6
KIAA2026
GDPD1
WASHC5
NSMCE2
BBS1
TMEM101
MAGOH
NUP107
TIMM17A
LMOD1
FEM1A
ZC3H18
ABT1
DNTTIP2
HDAC6
ZNF585B
ZNF383
NMT1
DCAKD
RNF26
C1QTNF5
ISY1-RAB43
ISY1
NSFL1C
ZNRD2
FAM89B
EHBP1L1
TTC31
CCDC142
DDX46
UHMK1
TACO1
MTX1
NDUFS7
WDR18
RCE1
NCAPH2
LMF2
CDK11B
THBS3
MRPL48
MRPS14
TXN2
ZZZ3
SF3B3
COG4
ZNF17
UBIAD1
UNKL
C16orf91
MOCS3
DPM1
NDUFB5
MRPL47
MRTO4
EMC1
RPUSD4
FAM118B
TRMT61B
C5orf51
UTP20
MRPL21
IGHMBP2
TSN
HMGCL
RIN1
BRMS1
B4GAT1
NOL8
CENPP
ARFGEF2
OS9
POLR2J2
WDR74
STX5
MRPL53
NUP54
DPP9
TM7SF3
MED21
PUS10
PEX13
WDR53
FBXO45
SETD3
CCNK
NUP133
DDX23
PRSS22
SLIRP
ALKBH1
MED4
MTBP
MRPL13
PSMC3
CCDC43
PHAX
ALDH7A1
TMEM262
ERGIC2
MRPS35
SDHB
SF3B2
GAL3ST3
TMX2
MED19
SCRN2
OSBPL7
MRPL10
LRRC46
NAGS
MAPKAPK5
TRIAP1
COX6A1
SLC25A53
FAM199X
NDUFAB1
RNASEH1
ZNF165
OR1F12
ZMAT2
HARS2
HARS1
NDUFAF2
ERCC8
QRICH1
SENP1
PFKM
YJU2
NUP160
STMN3
RTEL1
NCBP2AS2
NCBP2
HTRA2
DQX1
HSPBP1
BRSK1
RTF2
YIPF2
TIMM29
RTN4IP1
QRSL1
UBL5
DOK3
DDX41
SNRPC
PPP1R11
POLR1H
FBXL12
ZNF514
ZNF2
SREK1IP1
CWC27
STX16
BRF2
ZNF408
ARHGAP1
LYRM4
FARS2
RANBP3
OXNAD1
DPH3
CDK5RAP1
GOSR1
WNK4
VPS25
CACTIN
MED1
CWC25
ATG9B
ABCB8
TEKT2
ADPRS
TOMM6
PRICKLE4
FRS3
UQCC3
UBXN1
LBHD1
THUMPD1
RPS6KB2
PTPRCAP
UBQLN1
VCPKMT
DOLPP1
FASTKD2
CMTR1
KLHDC4
NOXO1
NDUFA9
AKAP3
FAM204A
ZFAND2A
KDM4D
CWC15
C1D
LANCL2
ATP6V0D1
AGRP
COMMD2
PSME3
BECN1
MRPL2
KLC4
CUL7
REXO1
EXOSC10
NPM3
FGF8
ZDHHC6
VTI1A
MIS12
DERL2
POLR2J
PLEKHM3
NMNAT1
LZIC
HNRNPA0
LSM5
AVL9
USHBP1
BABAM1
TAF2
ASH2L
MRPL37
CYB5RL
ZFPL1
CDCA5
RFXANK
BORCS8
MTMR2
CDK11A
HBS1L
PFDN1
SLC39A4
CPSF1
EIF3E
MRPS7
MIF4GD
GGA3
MZT2A
PNPT1
MAGOHB
TATDN3
NSL1
ZCCHC4
CTCF
WDR70
NUP155
LONP1
CATSPERD
ECSIT
CNN1
SEC13
VARS2
GTF2H4
SURF2
SURF1
RPL7A
MED22
TEFM
TBL3
RPS2
RNF151
KCNJ14
GRWD1
TRMT44
ACOX3
FAM98B
NUFIP1
GPALPP1
MUL1
PPIL4
RPLP0
GCN1
ZNF212
OPA1
DNAJC30
BUD23
ATP6V1C1
TBCCD1
DNAJB11
MRPL58
MED27
SLC39A2
METTL17
GSC2
DIABLO
FZR1
DOHH
XPO4
WDR61
RRP7A
XPC
LSM3
ZNF507
PGS1
CEP20
PEX19
JRK
NDUFB8
HIF1AN
TEPSIN
NDUFAF8
VPS52
RPS18
B3GALT4
MNAT1
COX10
PDCD6IP
PSMD4
NOM1
RAD51AP1
C12orf4
STPG3
NELFB
FAM166A
STAT3
COG2
FAAP20
PIGL
NCOR1
EIF1AD
CST6
BANF1
AURKAIP1
RNF40
CCDC189
DBT
SMN2
SMN1
GPATCH1
SERP1
EIF2A
RDH5
ITGA7
BLOC1S1
NXT2
ZNF358
MCOLN1
SART3
ISCU
SRPRA
OTUB1
NDUFB3
FAM126B
USP30
CLCN7
RNF166
CTU2
MFSD1
ANKFY1
STK36
RNF25
TMEM126A
ATP6V1G1
SEC16A
PGBD4
EMC7
C9orf163
MRPS30
FANCD2
GINS1
NCAPD2
MRPL51
RPS28
NDUFA7
GFM1
MED9
ZDHHC16
EXOSC1
SNIP1
DNALI1
COA6
CLDN7
EEF1AKMT3
TMEM128
VTA1
NMBR
LMTK2
KCTD5
THBS4
MTX3
EIF2B5
MRPL1
DNAJA3
CORO7-PAM16
CORO7
MRPS31
CTNNA1
VMO1
PSMB6
GLTPD2
TSFM
COPS8
TIMM50
NEK2
WDR24
STUB1
JMJD8
POLR1F
SFTPC
MAP3K7
LGI3
BMP1
AAR2
NDUFAF5
ESF1
TAF3
TXNL4B
DHX38
EPG5
COMMD1
ZACN
SRP68
GALR2
THOC1
TUFM
SH2B1
VAMP3
MTIF2
MRPL4
ZBTB45
SLC27A5
ZKSCAN4
NKAPL
COQ7
MESD
GNAL
CHMP1B
ZNF341
BRIX1
CCDC97
PEX14
DFFA
NDUFA12
NOC4L
DDX51
TJAP1
KIAA0895L
EXOC3L1
E2F4
PMPCB
TMEM217
TBC1D22B
SMG7
BNIP1
BORCS7
WDR81
MYNN
ACTRT3
RFNG
GPS1
DDX49
COPE
MRPS18C
HELQ
UBOX5
FASTKD5
ELMO3
MYDGF
AP5Z1
CLPTM1
APOC2
PALB2
DCTN5
ZNF839
MRPS18A
DPP8
SDHC
MPZ
UTP15
ANKRA2
RAD18
MRPS23
ACSF3
ATXN1L
TAF11
ANKS1A
DYNC1LI2
TMEM126B
DLG2
COPZ1
UBXN7
DHDDS
NVL
ASB6
TAX1BP3
EMC6
BBS10
MIS18A
UQCRC1
LIN7C
SAMD10
PRPF6
TIMM21
FBXO15
RNASEH2C
KAT5
UBXN11
METTL1
CYP27B1
TMA7
CCDC51
ATRIP
UBE4B
MKS1
TRAPPC8
RPUSD2
CCDC32
NOL10
PSMC6
NOL11
TSPAN10
NPLOC4
ZNF292
SEPTIN4
MTMR4
ANAPC11
ALYREF
UBFD1
EARS2
AARSD1
LTO1
SUGCT
MPLKIP
SPOUT1
MOK
SART1
YIPF4
GOSR2
EEF1AKMT2
ABRAXAS2
SMG5
PPIE
GRN
TMED9
B4GALT7
DHX40
VPS37A
CNOT7
PRPF38A
ORC1
ARMC8
UBN1
GLYR1
NUDT5
CDC123
FRG2C
RBM8A
PEX11B
MOGS
RICTOR
SH3YL1
ACP1
STX18
PTCD3
POLR1A
ARMC1
TUBGCP6
HDAC10
PIN4
GOLGA3
RMDN3
GCHFR
TERF2IP
KARS1
PSMB2
RNF114
TYW3
CRYZ
TGFBRAP1
CWF19L2
C2orf49
SENP5
PARL
PFDN4
UBE2V2
PIH1D2
NKAPD1
NOP9
DHRS1
TSEN15
PHKA2
WDR83OS
WDR83
MAN2B1
TPRKB
TOX4
RAB2B
FXR1
CYB561D1
PEX3
ADAT2
KLF1
GCDH
DNASE2
AARS2
REXO4
ADAMTS13
ZSCAN22
NAT10
CSTF2
DDX52
PCCB
PHB2
ZGRF1
LARP7
RFC1
NDUFV1
ITFG2
RECQL4
LRRC14
ARL8B
NSA2
GFM2
RRAD
CIAO2B
CES2
TYW1
SBDS
CSPP1
COPS5
SKIV2L
NELFE
PPP1R7
PASK
ZSCAN30
MFSD5
RECQL
GOLT1B
ATXN7L2
MTO1
CGAS
SPC25
MIA3
EXOSC3
MFSD3
EDC4
CENPBD1
EXOSC9
SLC38A7
MYL5
ATP5ME
ATG7
TRUB2
COQ4
STARD10
FAM149B1
ECD
RGS20
ATP6V1H
TBC1D30
GNS
TOP3B
SYNGR3
GFER
WWP2
NOB1
DHX16
OSCAR
NDUFA3
ALG10B
MAN2C1
GSTT2B
GSTT2
DDTL
DDT
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
COX16
NDUFAF1
TRUB1
TRIM23
TRAPPC13
SHLD3
RAB22A
ZBTB17
BMS1
ATP7B
ALG11
SLC24A1
INTS14
ZMPSTE24
TMCO2
TMEM79
RER1
MORN1
MRPL20
CCNL2
INTS1
RAE1
MTRNR2L3
HARBI1
ATG13
CEP162
SRP9
MED23
ENPP3
SLC35A2
PIM2
GID4
ATPAF2
TMEM150A
RNF181
LRRC24
SNRPD3
GUCD1
ZKSCAN8
METTL2A
RTN4RL1
DPH1
C6orf89
MYSM1
SF3B5
RPL35
ARPC5L
SLC35A3
NCSTN
COPA
BET1
USP14
MRPL35
IMMT
COA3
CNTD1
GPKOW
TCERG1
AUH
FCF1
AREL1
PCNX2
SNRPB2
AQR
RNF10
COQ5
RBSN
MRPL27
EME1
GPR107
LTB4R2
ST3GAL3
HSD17B10
TBRG4
UBN2
ZNF213
TMUB1
FASTK
AGAP3
PIGU
TNFSF13
SENP3
NBEAL2
DCP1B
CCDC12
YIPF3
POLR1C
LRRC73
MRPS10
NOL12
SAMM50
PRR3
GNL1
RPP30
DDX47
RBBP5
UQCRC2
TRAIP
ZGLP1
FDX2
ZNF3
COPS6
WDR38
SNRPE
HNRNPA1L2
ZNF778
SDHAF2
CPSF7
PTPRU