ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116460 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◢ SRX3010238: A549

◢ SRX3010239: A549

◢ SRX3010253: GM12878

◢ SRX3010254: GM12878

◢ SRX10476598: Hep G2

◢ SRX10476599: Hep G2

◢ SRX116459: hESC H1

◣ SRX116460: hESC H1

◢ SRX186642: hESC H1

◢ SRX6783963: hESC H1

◢ SRX6783964: hESC H1

◢ SRX8053100: MM.1S

◢ SRX8538839: NB-4

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

MTRNR2L1
KIF5C
MTRNR2L2
MSH3
DHFR
MAMDC2
MTRNR2L9
MTRNR2L10
RGPD2
RGPD1
MTRNR2L8
EMILIN2
PTPRN2
C1orf198
MTRNR2L6
DUX4
LOC102724770
DGCR6
NGB
CHID1
COL23A1
ACSL3
CNOT3
FRG2
NAGPA
IDH3B
UBE3B
GATB
ZNF830
CCT6B
SPNS1
LAT
NGDN
EIF2D
SMG8
SFSWAP
RBM48
PEX1
ATG14
PPWD1
CENPK
CCDC59
HAX1
SUMF1
PDE6D
COPS7B
MED6
TSR3
GNPTG
GET3
TRMT1
NACC1
ERAL1
THRA
MED24
RRP15
GPATCH3
PSMB7
SAP30BP
RECQL5
SUPT7L
SLC4A1AP
MRM3
GLOD4
GPN2
VPS50
HEPACAM2
CRBN
TMEM208
LRRC29
TMEM242
TOMM22
C8orf33
TMEM199
SEBOX
POLDIP2
POLR3F
DZANK1
ZC3HC1
NDUFS3
KBTBD4
FAM180B
GTF3C5
SSNA1
ANAPC2
TFPT
PRPF31
RBM19
ISY1-RAB43
ISY1
KRR1
SPATA25
NEURL2
CTSA
RPTOR
METTL15
KIF18A
U2SURP
TIMM22
IPO11
DIMT1
ZSWIM1
OAZ3
MRPL9
RGS14
LMAN2
CWF19L1
NUP107
MRPL45
VIRMA
MRPS15
PRR5L
COMMD9
TOP3A
SMCR8
MTBP
MRPL13
XAB2
STXBP2
PCP2
WASHC2C
TRIP4
PCLAF
PHF5A
ACO2
FAM162A
CCDC58
TACO1
POLR2J3
RBM42
TSR1
SGSM2
ZNF165
OR1F12
NCAPH2
LMF2
HAGH
FAHD1
LARS2
RTTN
ZFYVE26
RAD51B
TMEM101
LAMP1
STAT3
DNAJB12
VPS11
TMEM262
CDC23
DNAJC11
SMPD4
MZT2B
PEPD
ZBTB45
SLC27A5
WASHC2A
BRF2
TMEM41A
VAC14
DUS2
DPEP2NB
DDX28
ALKBH3
TPRN
TMEM203
NDOR1
CDKAL1
RANBP6
KIAA2026
TRIAP1
COX6A1
SUPV3L1
MRPL21
IGHMBP2
TRMT61B
TAS1R1
NOL9
MRPL44
UNKL
C16orf91
PMPCA
ENTR1
FEM1A
PUS10
PEX13
EMC4
EIF3F
PLEKHN1
NOC2L
KLHL17
SLC35B1
C12orf43
ERICH4
DMAC2
ZNF408
ARHGAP1
EIF3H
PELP1
ARRB2
NUP214
NDUFB3
FAM126B
SETD3
CCNK
SF3B3
COG4
ZDHHC6
VTI1A
HEXA
EIF1AD
CST6
BANF1
MRPL39
DBNDD2
URM1
USHBP1
BABAM1
SREK1IP1
CWC27
BBS1
PACSIN3
ARFGAP2
CWC25
CCDC43
MRPS11
MRPL46
ZMAT2
HARS2
HARS1
MRPS14
NOL8
CENPP
C16orf89
ALG1
ZNRD2
FAM89B
EHBP1L1
NMT1
DCAKD
STMN3
RTEL1
BSDC1
WDR74
STX5
ABT1
ZFPL1
CDCA5
MRPL48
EEF1E1
SYF2
WDR18
TSN
MRPS7
MIF4GD
GGA3
NOXO1
NPM3
FGF8
SLC39A4
CPSF1
NDUFS7
WDR70
NUP155
THUMPD1
TRMO
DDX23
RTN4IP1
QRSL1
UQCC1
YIPF2
TIMM29
MAGOH
ZNF789
ATP5MF-PTCD1
ATP5MF
MRPS22
GABARAP
ELP5
CTDNEP1
TXN2
WDR48
SCN11A
MRPS35
UTP20
PPP1R11
POLR1H
MRPL55
NMNAT1
LZIC
NSFL1C
RBX1
NDUFAF2
ERCC8
WNK4
VPS25
CDK11B
PPT1
ZC3H18
COMMD4
DDX46
VPS52
RPS18
B3GALT4
FASTKD2
LONP1
CATSPERD
MRPL1
HNRNPA0
CDK5RAP1
WDR83OS
WDR83
MAN2B1
YJU2
RPUSD4
FAM118B
TBL3
RPS2
RNF151
HSPBP1
BRSK1
SUGCT
MPLKIP
PIGL
NCOR1
TCTN2
SNRPC
FAAP20
SPTLC1
VPS33A
LIN52
ALDH6A1
PPIL4
POLR2J
QRICH1
TEFM
TOMM6
PRICKLE4
FRS3
ZGRF1
LARP7
ING4
NDUFB5
MRPL47
MOCS3
DPM1
MED1
ZFAND2A
VARS2
GTF2H4
RDH5
ITGA7
BLOC1S1
C5orf51
ATP5IF1
KLHDC4
WDR53
FBXO45
LYRM4
FARS2
UHMK1
ERGIC2
NUDT5
CDC123
KAT8
BCKDK
PISD
SENP1
PFKM
SLC7A6OS
PRMT7
PIH1D2
NKAPD1
NAGS
WASHC5
NSMCE2
PFDN1
FAM204A
TTC31
CCDC142
TSR2
RNF26
C1QTNF5
MRPS18C
HELQ
MAPKAPK5
OSBPL9
POLR1F
USP30
TATDN3
NSL1
SCRN2
OSBPL7
MRPL10
LRRC46
CTNNA1
KCNJ14
GRWD1
NEK2
RFXANK
BORCS8
MFN2
DNAJC30
BUD23
NUP54
GDPD1
UBL5
TMX2
MED19
ZCCHC4
OS9
FBXL12
MED23
ENPP3
TMEM128
STX16
TRAPPC2L
MED4
GALNS
XPO4
PSME3
BECN1
NDUFAB1
NOC4L
DDX51
MRTO4
EMC1
COX16
LSM5
AVL9
MTIF2
EEF1AKMT3
MZT2A
GOSR1
SLC25A53
FAM199X
SLIRP
ALKBH1
SEPTIN4
MTMR4
PEX19
DPP9
CACTIN
PSMC3
SEC13
FANCD2
HDAC6
TRMT44
ACOX3
ZNF17
BRIX1
NSA2
GFM2
DNTTIP2
OXNAD1
DPH3
VCPKMT
JRK
STX18
MRPL2
KLC4
CUL7
CENPW
NUP160
UBIAD1
TEKT2
ADPRS
AAR2
TBC1D23
MAGOHB
NXT2
ZKSCAN4
NKAPL
NUP133
MRPS31
XPC
LSM3
COMMD2
GOLGA3
RCE1
DIABLO
MRPL4
PLEKHM3
TSFM
REXO4
ADAMTS13
SF3B2
GAL3ST3
MTX1
PHAX
ALDH7A1
COX10
ZNF514
ZNF2
COPS8
NDUFAF1
OPA1
RPS28
NDUFA7
BORCS7
TMEM126B
DLG2
WDR24
STUB1
JMJD8
KCTD5
NOM1
THBS3
C1D
NUFIP1
GPALPP1
CSPP1
COPS5
TAF11
ANKS1A
NOP16
HIGD2A
RTF2
ATG9B
ABCB8
MRPS30
CDK11A
SF3A3
SPC25
NOL11
ZNF585B
ZNF383
GTF3C3
C2orf66
MED9
FAM149B1
ECD
POMZP3
TIMM17A
LMOD1
AURKAIP1
POLR2J2
RBBP5
CEP20
SNRPD3
GUCD1
COPZ1
TRAIP
NOL10
TUFM
SH2B1
CCDC97
ZZZ3
RBM28
HBS1L
SART3
ISCU
SDE2
CCDC106
DHX40
COQ7
RIN1
BRMS1
B4GAT1
TRUB1
NDUFB8
HIF1AN
ZNF581
ZNF580
SMG7
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
MAP3K7
TDG
C12orf73
KDM4D
CWC15
MRPL53
OR6B2
NDUFA10
RNASEH1
DDX49
COPE
RANBP3
CPPED1
HTRA2
DQX1
STK36
RNF25
HMGCL
MRPS23
TNPO3
TIMM21
FBXO15
SERP1
EIF2A
EXOSC3
TMEM126A
NOP9
DHRS1
SPRYD4
REXO1
PRRT2
MAZ
SSBP1
MIS18A
GPATCH1
PHB2
NOL12
PRSS22
FAM104B
SRPRA
MRPL58
SMU1
ZNF212
RPLP0
GCN1
BNIP1
PRR3
GNL1
METTL1
CYP27B1
TAF2
TAF3
GNAL
CHMP1B
EIF3E
ITGB3BP
EFCAB7
EXOSC9
FAM187A
EFTUD2
CCDC103
GFM1
NUF2
TIMM50
FZR1
DOHH
PEX3
ADAT2
FAM98B
GBA
SDHC
MPZ
ZNF213
ZNF839
TGFBRAP1
C2orf49
RPS6KB2
PTPRCAP
TMED9
B4GALT7
PRKRIP1
UBQLN1
MOGS
ATP6V0D1
AGRP
TM7SF3
MED21
DOLPP1
ASB6
STOML2
PIGO
MRPS10
RAD51AP1
C12orf4
ZSCAN22
AARS2
UQCC3
UBXN1
LBHD1
CLPTM1
APOC2
SAMD10
PRPF6
RNF166
CTU2
UTP15
ANKRA2
FAM214B
PTCD3
POLR1A
DNAJA3
CORO7-PAM16
CORO7
METTL2B
TEPSIN
NDUFAF8
NDUFA9
AKAP3
TM9SF4
MKS1
VMO1
PSMB6
GLTPD2
PGS1
CLPTM1L
SFTPC
LGI3
BMP1
NCBP2AS2
NCBP2
SLC24A1
INTS14
TMEM230
PCNA
OSCAR
NDUFA3
ARMC1
MNAT1
FCF1
AREL1
SLC25A26
BMS1
CWF19L2
AQR
METTL16
PPP1R7
PASK
OTUB1
SMN2
SMN1
ARFGEF2
GRN
FRG2C
RBM8A
PEX11B
MRPL20
CCNL2
CSTF2
VPS37A
CNOT7
DPP8
GTF2H3
EIF2B1
LIN7C
BBS10
RPUSD2
CCDC32
MIS12
DERL2
NDUFV1
DOK3
DDX41
SLC39A2
METTL17
MRPL27
EME1
TAX1BP3
EMC6
ATF6
RNASEH2C
KAT5
YARS2
SMG5
TROAP
KLF1
GSTT2B
GSTT2
GCDH
DNASE2
DDTL
DDT
YIPF3
POLR1C
LRRC73
ECSIT
CNN1
GNG14
TBRG4
ZMPSTE24
TMCO2
RFC1
WDR61
AARSD1
TUBA4B
TUBA4A
STK16
GLB1L
NDUFS4
AAAS
POLR3B
NDUFC2-KCTD14
NDUFC2
NUDCD3
FBXW9
ZDHHC16
UBN2
EXOSC1
PRPF38A
ORC1
TOP3B
MFSD1
MOK
AP5Z1
RAD18
FAM207A
TIMM9
KIAA0586
ZNF507
MALSU1
P2RY11
BCAS3
AP1G1
MRPL35
IMMT
PSMD4
PSMB2
ANKFY1
ZKSCAN8
ZNF207
MRPL3
C17orf75
MRPL37
CYB5RL
MTMR2
UBE2A
CXorf56
TRIM23
TRAPPC13
STARD3
SHLD3
PPP1R1B
LTB4R2
THBS4
MTX3
TAF10
ZNF561
TCERG1
ATXN1L
HNRNPA1L2
UMPS
MED27
NDUFA12
COA6
ZGLP1
FDX2
LANCL2
SRRD
HPS4
PTCD2
MRPS27
WDR36
SDHB
MRPS18A
WDR11
GID4
ATPAF2
ZNF576
IRGQ
TRUB2
COQ4
DDX19A
USP54
NCAPD2
MRPL51
CENPBD1
DHDDS
GINS1
METTL2A
TMA7
CCDC51
ATRIP
UBA5
COMMD1
ACAD11
SNRPE
MRPL22
GEMIN5
SF3B5
SNX1
CIAO2A
EXOSC5
BCKDHA
TYW3
CRYZ
SEC16A
DBT
C9orf163
YBEY
MCM3AP
PNPT1
ZNF358
MCOLN1
DBF4B
THAP10
LRRC49
TRDMT1
PSD
FBXL15
SART1
TJAP1
ZSCAN30
TIMM44
MTO1
EXOSC10
CGAS
UQCRC2
PCID2
GSC2
CUL4A
ZSWIM8
CHCHD1
MED28
CCAR2
C8orf58
MYNN
ACTRT3
RICTOR
ATP7B
ALG11
CMTR1
TERF2IP
KARS1
LMTK2
HARBI1
ATG13
DHX16
GOSR2
TPP1
KLHL12
EEF1AKMT2
CRLF3
C6orf89
ATAD5
ABRAXAS2
MMUT
CENPQ
TBCCD1
DNAJB11
ATP6V1G1
ZNF23
INTS1
LSG1
PRPF18
TNFAIP8L2
TMOD4
SCNM1
PALB2
LYSMD1
DCTN5
CEP162
CFAP410
SRSF11
LRRC40
RPS7
BIRC5
NR1H3
ASH2L
ACP2
NHP2
ZACN
SRP68
GALR2
TFIP11
SKIV2L
NELFE
EIF4B
VHLL
GLMP
TBCK
AIMP1
TSEN15
UBE2L3
MYSM1
B9D1
RNASEK
C17orf49
THOC1
PINX1
UBXN11
NCSTN
COPA
MUL1
ZNF292
RPS5
SSU72
EIF2B5
SYNGR3
GFER
ANAPC5
ZSCAN25
SV2A
SF3B4
MTMR11
TMCO6
NDUFA2
IK
PEF1
UBFD1
EARS2
NME1-NME2
NME1
MYBL2
APTX
NFAT5
ZNHIT2
FAU
TP53I3
SF3B6
FAM228B
CLPB
VPS13B
PPIL1
H1-10