ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6783964 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◢ SRX3010238: A549

◢ SRX3010239: A549

◢ SRX3010253: GM12878

◢ SRX3010254: GM12878

◢ SRX10476598: Hep G2

◢ SRX10476599: Hep G2

◢ SRX116459: hESC H1

◢ SRX116460: hESC H1

◢ SRX186642: hESC H1

◢ SRX6783963: hESC H1

◣ SRX6783964: hESC H1

◢ SRX8053100: MM.1S

◢ SRX8538839: NB-4

◢ SRX23740430: SUM 149PT

◢ SRX23740431: SUM 149PT

◢ SRX23740438: SUM 149PT

◢ SRX23740439: SUM 149PT

◢ SRX23740455: SUM 149PT

◢ SRX23740458: SUM 149PT

◢ SRX23740461: SUM 149PT

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

MTRNR2L2
MSH3
DHFR
ZNF830
CCT6B
NAGPA
UBE3B
GET3
IDH3B
MED6
PPWD1
CENPK
DUX4
MTRNR2L1
LARS2
TRMT1
NACC1
PHF5A
ACO2
GPATCH3
GPN2
SPNS1
LAT
MTRNR2L8
MRM3
GLOD4
MRPS15
STAT3
GATB
RBM48
PEX1
SAP30BP
RECQL5
SSNA1
ANAPC2
RNF26
C1QTNF5
NGDN
U2SURP
RANBP6
KIAA2026
HAX1
TIMM22
FEM1A
LOC102724770
DGCR6
RRP15
XAB2
STXBP2
PCP2
TRIAP1
COX6A1
ATG14
THRA
MED24
PSMB7
GTF3C5
ZC3HC1
SETD3
CCNK
PPIL4
RTN4IP1
QRSL1
NCAPH2
LMF2
FAM162A
CCDC58
RBM42
NDUFS3
KBTBD4
FAM180B
POLR3F
DZANK1
SFSWAP
ZFYVE26
RAD51B
CTNNA1
TFPT
PRPF31
IPO11
DIMT1
TMEM242
CCDC59
BSDC1
TCTN2
PMPCA
ENTR1
RBX1
ERICH4
DMAC2
SUPT7L
SLC4A1AP
RBM19
PELP1
ARRB2
MTBP
MRPL13
WDR48
SCN11A
NDUFS7
ERAL1
TOP3A
SMCR8
NPM3
FGF8
NUP214
WDR18
PISD
TSR1
SGSM2
ZNF789
ATP5MF-PTCD1
ATP5MF
MRPS7
MIF4GD
GGA3
ZNF839
MOK
CWF19L1
CCDC43
VIRMA
SPTLC1
MAGOH
TOMM22
LONP1
CATSPERD
TMEM208
LRRC29
C12orf43
VAC14
C8orf33
ZNF17
MRPL45
MRPS14
SMPD4
MZT2B
PHB2
FRG2C
OSBPL9
MFN2
FAM204A
EEF1E1
ZFAND2A
DUS2
DPEP2NB
DDX28
VCPKMT
EIF1AD
CST6
BANF1
PLEKHN1
NOC2L
KLHL17
DNTTIP2
RGS14
LMAN2
SPRYD4
SMG8
PACSIN3
ARFGAP2
USHBP1
BABAM1
PFDN1
C16orf89
ALG1
SPATA25
NEURL2
CTSA
ZSWIM1
PPT1
VPS11
UTP20
SUPV3L1
UHMK1
SF3B3
COG4
TRAPPC2L
GALNS
VPS52
RPS18
B3GALT4
CNOT3
DNAJC30
BUD23
YY1
TMEM199
SEBOX
POLDIP2
UNKL
C16orf91
ZDHHC6
VTI1A
UBN2
URM1
THBS4
MTX3
OAZ3
MRPL9
CDK11B
MED27
PPP1R7
PASK
RPL35
ARPC5L
WDR38
HNRNPA0
OS9
EIF3E
SDE2
MTX1
THBS3
UBL5
FBXL12
EIF2D
RTTN
POLR1F
BRF2
NOXO1
TBL3
RPS2
RNF151
SUMF1
CDC23
USP54
NDUFB5
MRPL47
MRPL44
KAT6A
FRG2
FAM104B
ART1
WDR74
STX5
KLHDC4
MAGOHB
MAPKAPK5
PRPF38A
ORC1
TIMM44
MYSM1
TPRN
TMEM203
NDOR1
MRPS11
MRPL46
HSPBP1
BRSK1
HMGCL
NUFIP1
GPALPP1
SYF2
NMT1
DCAKD
TOMM6
PRICKLE4
FRS3
DDX23
TEKT2
ADPRS
WDR70
NUP155
MAMDC2
NUP54
SMU1
TRUB1
MRPL2
KLC4
CUL7
NOC4L
DDX51
EIF3F
MRPL4
VPS50
HEPACAM2
DHX40
RPUSD4
FAM118B
WASHC2C
THUMPD1
PTCD2
MRPS27
KCNJ14
GRWD1
MKS1
LIN52
ALDH6A1
XPO4
HM13
SLIRP
ALKBH1
MAP3K7
SSU72
DNMBP
TRMT44
ACOX3
EIF3H
TAF2
ATP7B
ALG11
CDKAL1
CWC25
TJAP1
TRIP11
IL32
PRR5L
COMMD9
PRRT2
MAZ
DNAJA3
CORO7-PAM16
CORO7
DPP9
ZNF165
OR1F12
HEXA
TMEM128
WDR83OS
WDR83
MAN2B1
EIF4B
NFAT5
SLC25A26
MRPL55
SEC13
MED9
AP1G1
LIN7C
DCTN4
ATP5IF1
ZNF408
ARHGAP1
MZT2A
TSN
RBM22
USP30
RPS28
NDUFA7
NSFL1C
ERGIC2
QRICH1
SDHC
MPZ
SRPRA
GABARAP
ELP5
CTDNEP1
ZNF585B
ZNF383
TSC1
GFI1B
MED1
STX18
RPAIN
NUP88
RCE1
ZNHIT2
FAU
ZNF614
ZC3H18
COPZ1
PRKRIP1
EMC4
ZNRD2
FAM89B
EHBP1L1
MRPL21
IGHMBP2
TATDN3
NSL1
SUGCT
MPLKIP
UQCC1
XPC
LSM3
RDH5
ITGA7
BLOC1S1
RPUSD2
CCDC32
PUS10
PEX13
TMEM217
TBC1D22B
TSR3
GNPTG
TRMT61B
WDR53
FBXO45
YARS2
PCID2
CUL4A
TOMM40L
APOA2
WASHC5
NSMCE2
TMEM101
NAGS
SART3
ISCU
ZNF514
ZNF2
CEP20
MRPL20
CCNL2
KDM4D
CWC15
UBE2L3
QDPR
CLRN2
UBN1
GLYR1
FZR1
DOHH
AP3S1
KIF5C
CDK11A
MRPS22
COMMD4
NOL8
CENPP
GADD45GIP1
KRR1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
RFXANK
BORCS8
VPS33A
RPTOR
PEX19
CCAR2
C8orf58
LMAN2L
SYNGR3
GFER
ADM
OTUB1
GMPPB
AMIGO3
PEPD
WASHC2A
SF3B2
GAL3ST3
C1D
DOLPP1
VPS37A
CNOT7
NUP133
DDX49
COPE
NUP42
CRBN
SREK1IP1
CWC27
LRRC37A3
RPL9
LIAS
PNKP
AKT1S1
TBC1D17
TMEM262
NUP160
B9D1
WDR4
PDS5A
TTC31
CCDC142
UQCRC1
DIABLO
AASDH
TIMM17A
LMOD1
YIPF2
TIMM29
PSMB2
PDE6D
COPS7B
TRIP4
PCLAF
COX10
RABL3
GTF2E1
RGPD2
RGPD1
DNAJB12
PIH1D2
NKAPD1
CSPP1
COPS5
NELFA
TAF3
ZBTB45
SLC27A5
PPP5D1
CALM3
MATN1
TMEM14A
SPC24
UBE3C
PHRF1
COL23A1
MRPL39
GID4
ATPAF2
DBT
LEMD3
MRPL1
SDHB
RPS6KB2
PTPRCAP
EXOSC10
MRPL37
CYB5RL
PYDC5
IFI16
TSR2
CACTIN
PEF1
UBE2A
CXorf56
CCNA2
RRP1
TLCD1
RPL23A
RAB34
NEK8
PROCA1
MRTO4
EMC1
PPP1R11
POLR1H
TEPSIN
NDUFAF8
RNF40
CCDC189
LMTK2
EXOSC9
POLR2J3
NOL11
TM2D1
ISY1-RAB43
ISY1
CLPTM1L
SNRPC
UMPS
EIF2S1
ATP6V1D
RNASEH1
BNIP1
KLF1
GCDH
DNASE2
TBRG4
RIN1
BRMS1
B4GAT1
SARNP
ORMDL2
SLC35B1
SF3B5
GTF2H3
EIF2B1
LSM2
HSPA1L
HSPA1A
SEC16A
C9orf163
MRPS10
CFAP410
ADAMTS9
PPP2R3B
UTF1
SAMD10
PRPF6
TERF2IP
KARS1
ZNF268
HBS1L
NDUFAF2
ERCC8
HTRA2
DQX1
TMEM131
TGFBRAP1
C2orf49
PEX3
ADAT2
ATP2C1
CEP295NL
TMEM126A
ZGLP1
FDX2
ZSWIM8
CHCHD1
TMEM230
PCNA
ING5
RBM15
HEXD
EIF4G2
NOM1
RNF166
CTU2
MTO1
CGAS
HSPA1B
TMEM126B
DLG2
TM9SF4
H1-10
MRPL48
PSME3
BECN1
ATAD3B
TMX2
MED19
STMN3
RTEL1
MIA3
VANGL2
C5orf51
SRRD
HPS4
NFX1
RANBP3
RBM8A
PEX11B
FXR1
MFSD5
STK19
LOC110384692
DXO
C4B_2
C4B
C4A
LSM5
AVL9
LRRC57
HAUS2
UQCRB
ZZZ3
STARD10
PRR3
GNL1
PINX1
PDHA1
UBIAD1
ZNF213
COPS8
NDUFV1
JUND
IQCN
MRPS23
OSCAR
NDUFA3
GLG1
OVCA2
GNAI1
TAS1R1
NOL9
NOL10
EXOSC5
BCKDHA
INTU
HECTD4
DBNDD2
TBCCD1
DNAJB11
SRSF11
LRRC40
GPAM
FAM156B
FAM156A
PIM1
PGS1
EEF1AKMT3
METTL1
CYP27B1
SNRPD3
GUCD1
CHM
MED23
ENPP3
SUGP1
MAU2
DCP1A
OTUD6B
CHMP7
HAGH
FAHD1
MTIF2
RER1
MORN1
TERF1
ITGB3BP
EFCAB7
ATG7
DNAJC13
POMZP3
SNX17
EIF2B4
ZNF513
UBE2L6
DNAJC11
ZCCHC10
PFAS
ZNF304
ZFPL1
CDCA5
UTP15
ANKRA2
TUBGCP6
HDAC10
GOLGA3
TMEM183A
RPL14
CA10
SLC7A6OS
PRMT7
MOCS3
DPM1
SLC25A53
FAM199X
PSMD4
THOC1
SPOUT1
ZGRF1
LARP7
RAB3GAP1
TMA7
CCDC51
ATRIP
RNF10
COQ5
OR6B2
NDUFA10
CUTC
COX15
TMEM237
NRAS
NXT2
PMPCB
SDHAF2
CPSF7
FAF2
TBCK
AIMP1
RPS14
TXN2
NCAPD2
MRPL51
MRPL22
GEMIN5
HDAC6
NDUFB8
HIF1AN
PDHB
FAM135A
MED4
GNAL
CHMP1B
MRPS18C
HELQ
PSMF1
COQ9
CIAPIN1
MRPS35
REXO1
MYL5
ATP5ME
ZNF426
BBS1
ASH2L
MYDGF
TNFSF13
SENP3
PLCD3
ACBD4
IARS1
KAT8
BCKDK
COQ7
NOP9
DHRS1
ZMPSTE24
TMCO2
DDX47
FAM187A
EFTUD2
CCDC103
ZNF594
RPL6
PTPN11
GLRX3
OXNAD1
DPH3
COMMD2
ANKRD36
NDUFAF1
NDUFA5
FANCD2
MRPS31
NPR1
ILF2
SLC39A2
METTL17
SKIV2L
NELFE
CCDC106
ZNF581
ZNF580
PPP4R3A
GOSR1
FAM98B
CLDN7
RAVER1
ICAM3
TRIM65
MRPL38
ASXL2
CYP46A1
WDR87
SIPA1L3
NUP107
MUL1
MRPS18A
AUH
TAF6
MBLAC1
CNPY4
ZNF331
TACO1
TAF11
ANKS1A
NCSTN
COPA
NIPA2
HOXA3
GDF11
CD63
HOXA6
HOXA5
ANKFY1
RTF2
TIMM50
MRPS18B
ATAT1
MESD
SEPTIN4
MTMR4
RMDN3
GCHFR
MRPS17
TBCC
BICRAL
ZNF23
RAB24
PRELID1
MXD3
WDR75
PDCD6IP
NDUFB3
FAM126B
LANCL2
LTB4R2
WDR20
HSP90AA1
CAAP1
CMTR1
RRP7A
FAAP20
FAM149B1
ECD
COX16
SENP2
PRRT1
PPT2
FASTKD2
METTL16
RLF
HDAC4
ZWILCH
SNAPC5
RPL4
SPACA9
AK8
ECSIT
CNN1
WDR61
TBP
PSMB1
YJU2
MYNN
ACTRT3
TBC1D14
TDG
C12orf73
SCFD1
ZNF181
PTCD3
POLR1A
TIMM9
KIAA0586
MED20
BYSL
WFDC3
DNTTIP1
YIPF6
ATXN1L
SNX1
CIAO2A
IMP4
CCDC115
KPTN
PRKRA
PJVK
NUDT5
CDC123
BMS1
USP14
ZWINT
IMMP1L
ELP4
TM7SF3
MED21
SENP5
RNF141
DHDDS
SPC25
MALSU1
NHP2
CCNT2
PKN2
GSTT2B
GSTT2
DDTL
DDT
TFIP11
NUP188
DOLK
ATAD3A
LYRM4
FARS2
PEX14
DFFA
TCERG1
SAP18
TRMO
ABT1
RNF114
MTF2
USP20
C9orf78
PPP2CA
LAMP1
TUFM
SH2B1
MAN2C1
TARDBP
TSNAXIP1
RANBP10
LCMT1
PRMT5
MRPS9
OSBPL8
VMO1
PSMB6
GLTPD2
ZNF341
TRAPPC8
TRIM23
TRAPPC13
SHLD3
ST7L
CAPZA1
RBM23
SDCBP2
SNX12
NDUFA9
AKAP3
STK36
RNF25
MAF1
CYC1
WDR97
CDK5RAP2
NECAP1
NDUFB10
INTS3
SENP1
PFKM
GID8
DIDO1
TUBA4B
TUBA4A
STK16
GLB1L
PODNL1
DCAF15
ATP9B