ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6783963 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◢ SRX3010238: A549

◢ SRX3010239: A549

◢ SRX3010253: GM12878

◢ SRX3010254: GM12878

◢ SRX10476598: Hep G2

◢ SRX10476599: Hep G2

◢ SRX116459: hESC H1

◢ SRX116460: hESC H1

◢ SRX186642: hESC H1

◣ SRX6783963: hESC H1

◢ SRX6783964: hESC H1

◢ SRX8053100: MM.1S

◢ SRX8538839: NB-4

◢ SRX23740430: SUM 149PT

◢ SRX23740431: SUM 149PT

◢ SRX23740438: SUM 149PT

◢ SRX23740439: SUM 149PT

◢ SRX23740455: SUM 149PT

◢ SRX23740458: SUM 149PT

◢ SRX23740461: SUM 149PT

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

KIF5C
MTRNR2L1
MTRNR2L9
RGPD2
RGPD1
EMILIN2
METTL15
KIF18A
IDH3B
CCDC59
MTRNR2L2
MSH3
DHFR
MTRNR2L10
SUMF1
ATG14
PTPRN2
NAGPA
RBM19
NGDN
VPS50
HEPACAM2
C1orf198
SPNS1
LAT
HAGH
FAHD1
MTRNR2L8
ZNF830
CCT6B
U2SURP
TMEM242
TRMT1
NACC1
PPWD1
CENPK
MRM3
GLOD4
FAM204A
UBE3B
MRPS18C
HELQ
GPATCH3
GPN2
RBM48
PEX1
ISY1-RAB43
ISY1
MRPL39
GATB
PRR5L
COMMD9
CDC23
ERAL1
EIF2D
ZFYVE26
RAD51B
MRPL1
PHF5A
ACO2
MAMDC2
RTTN
SMG8
RGS14
LMAN2
TSR3
GNPTG
ZC3HC1
ZNF165
OR1F12
C8orf33
MED6
GTF3C5
PDE6D
COPS7B
TOMM22
PLEKHN1
NOC2L
KLHL17
POLR3F
DZANK1
NDUFAF2
ERCC8
SSNA1
ANAPC2
THRA
MED24
GET3
RANBP6
KIAA2026
SFSWAP
TMEM41A
TIMM22
NGB
PPT1
KRR1
WDR18
TCTN2
BSDC1
MTRNR2L6
TRAPPC2L
GALNS
CNOT3
XAB2
STXBP2
PCP2
UBL5
FBXL12
PSMB7
NDUFS3
KBTBD4
FAM180B
ZNRD2
FAM89B
EHBP1L1
TFPT
PRPF31
PEPD
TOMM6
PRICKLE4
FRS3
MRPL44
TRIP4
PCLAF
PUS10
PEX13
INTU
POLR1F
SREK1IP1
CWC27
MRPL45
SUPT7L
SLC4A1AP
NCAPH2
LMF2
TMEM199
SEBOX
POLDIP2
UNKL
C16orf91
WASHC2A
LIN52
ALDH6A1
FEM1A
MTIF2
BRIX1
NUP214
DNTTIP2
UQCC1
NDUFS7
MRPS15
VIRMA
C16orf89
ALG1
MRPS14
ACSL3
WASHC2C
RNF26
C1QTNF5
CSPP1
COPS5
RRP15
SAP30BP
RECQL5
PDCD6IP
TEKT2
ADPRS
RPTOR
TMEM208
LRRC29
PELP1
ARRB2
CWF19L1
URM1
MRPL55
TMEM126B
DLG2
IPO11
DIMT1
TIMM17A
LMOD1
YIPF2
TIMM29
TMEM101
PFDN1
TAF3
EIF3H
RBM42
NOL8
CENPP
FASTKD2
DBT
LARS2
BBS1
FAM162A
CCDC58
DBNDD2
NSFL1C
COX10
EIF1AD
CST6
BANF1
VPS11
UBIAD1
NPM3
FGF8
CRBN
PMPCA
ENTR1
ZNF207
C17orf75
SETD3
CCNK
MTBP
MRPL13
TSR1
SGSM2
DNAJC30
BUD23
TRIAP1
COX6A1
TXN2
TPRN
TMEM203
NDOR1
WDR74
STX5
LONP1
CATSPERD
METTL16
ZMAT2
HARS2
HARS1
SLC39A4
CPSF1
MRTO4
EMC1
RPUSD4
FAM118B
BRF2
EIF3F
HBS1L
TOP3A
SMCR8
MRPS22
USHBP1
BABAM1
DNAJC11
NAXE
GPATCH4
MFN2
MRPL58
CEP20
APBB2
RTN4IP1
QRSL1
PIGL
NCOR1
DDX23
MKS1
KAT8
BCKDK
SCML1
HEXA
RCE1
SPATA25
NEURL2
CTSA
SF3B2
GAL3ST3
ATP5IF1
NMT1
DCAKD
C5orf51
RTF1
COMMD4
VCPKMT
NUP54
PSMC3
TMEM262
NUP160
RDH5
ITGA7
BLOC1S1
ZNF789
ATP5MF-PTCD1
ATP5MF
NMNAT1
LZIC
MRPL21
IGHMBP2
MYL5
ATP5ME
SLC25A26
SF3B3
COG4
OAZ3
MRPL9
PEX19
C12orf43
CSTF2
VPS33A
ATXN2L
ZBTB45
SLC27A5
USP30
MNAT1
UTP20
QRICH1
MRPL2
KLC4
CUL7
NOL11
TRMO
TRMT61B
RBX1
SENP1
PFKM
PISD
MRPS11
MRPL46
MOCS3
DPM1
DPP9
OXNAD1
DPH3
KCTD5
COX16
HNRNPA1L2
SUPV3L1
RPS28
NDUFA7
ZFAND2A
MRPS31
TACO1
MRPL48
TAS1R1
NOL9
DIABLO
NDUFAF1
UHMK1
HMGCL
THUMPD1
ZNF213
OS9
PACSIN3
ARFGAP2
SLC25A53
FAM199X
RABL3
GTF2E1
ALKBH3
COL23A1
DUX4
ZSCAN22
GSTT2B
GSTT2
DDTL
DDT
SPRYD4
SUGCT
MPLKIP
TMEM216
ZNF17
ATP7B
ALG11
ERGIC2
TJAP1
VAC14
MZT2A
LOC102724770
DGCR6
TIMM21
FBXO15
RNF6
SPATA20
CACNA1G
KCNJ14
GRWD1
TM9SF4
TEFM
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
OSCAR
NDUFA3
USP54
TNPO3
CDK5RAP1
WNK4
VPS25
TAF2
LYRM4
FARS2
LIN7C
XPO4
COPS8
ABT1
OPA1
PPP1R7
PASK
TAF10
TPP1
WDR48
SCN11A
SLC35A3
MRPS10
DNAJB12
ERICH4
DMAC2
AURKAIP1
KDM4D
CWC15
USP8
HSPBP1
BRSK1
FZR1
DOHH
SMPD4
MZT2B
STX18
PPP1R11
POLR1H
PCID2
CUL4A
RANBP3
TATDN3
NSL1
MED23
ENPP3
NCAPD2
MRPL51
TMX2
MED19
WDR24
STUB1
JMJD8
SEC16A
C9orf163
TBRG4
EIF3E
ANKRD13C
DUS2
DPEP2NB
DDX28
MPHOSPH10
MCEE
CCAR2
C8orf58
HAX1
PHB2
MTO1
CGAS
ZDHHC6
VTI1A
TAF11
ANKS1A
WDR70
NUP155
PIGK
WDR53
FBXO45
NOC4L
DDX51
EEF1E1
ZZZ3
UBN1
GLYR1
SLC35B1
TRMT44
ACOX3
ZNF770
OR6B2
NDUFA10
SLC7A6OS
PRMT7
CCDC43
STX16
NDUFB5
MRPL47
SYF2
ARFGEF2
CACTIN
SKIDA1
ZNF514
ZNF2
KLHDC4
LSM5
AVL9
AP5Z1
MFSD5
ZGLP1
FDX2
TMEM217
TBC1D22B
IQCH
AAGAB
EMC4
MAGOH
APTX
DUS4L-BCAP29
DUS4L
COG5
RNASEK
C17orf49
TSN
SART3
ISCU
FAM187A
EFTUD2
CCDC103
RFXANK
BORCS8
KLF1
GCDH
DNASE2
WDR36
TSR2
SNRPC
CDKAL1
XPC
LSM3
ZKSCAN4
NKAPL
ARMC8
ZMPSTE24
TMCO2
SPAG1
POLR2K
FBXO43
LAMP1
FANCD2
DHX40
TIMM44
TBC1D22A
NDUFA9
AKAP3
TAX1BP3
EMC6
WDR83OS
WDR83
MAN2B1
NDUFV1
YIPF3
POLR1C
LRRC73
TRDMT1
ACIN1
ZC3H18
GOSR1
TMEM126A
RPUSD2
CCDC32
GTF3C3
C2orf66
SRPRA
GOLGA3
UMPS
NSUN4
RPS7
PUM3
TBC1D23
UQCRC1
LRRC8A
KYAT1
MRPS7
MIF4GD
GGA3
EXOSC3
ZCCHC4
UBXN11
TRUB1
PTPN21
PHAX
ALDH7A1
TM2D1
HIRIP3
UBN2
DDX46
YBEY
MCM3AP
ZNF585B
ZNF383
NOP16
HIGD2A
SF3A3
ZNF561
STOML2
PIGO
FAM214B
UBE2A
CXorf56
GTF2H3
EIF2B1
VAMP3
WDR11
ANKFY1
MYSM1
NCSTN
COPA
L3MBTL2
PIN1
SSBP1
SDHC
MPZ
EEF1AKMT2
ABRAXAS2
NUF2
SYNGAP1
CUTA
SDE2
ZDHHC16
EXOSC1
MRPL4
SEPTIN4
MTMR4
MIA3
METTL2B
PTCD2
MRPS27
IPPK
MED4
ASH2L
TUFM
SH2B1
MRPL20
CCNL2
FRA10AC1
NDUFAB1
ZNF358
MCOLN1
CCDC97
ZBTB8OS
RBBP4
ZNF461
SMU1
ZNF497
A1BG
GABARAP
ELP5
CTDNEP1
WASHC5
NSMCE2
PEX3
ADAT2
TYW1B
NUP107
EXOSC9
PNKP
AKT1S1
ATAD3B
TBC1D17
ZNF408
ARHGAP1
VPS52
RPS18
B3GALT4
ANAPC11
ALYREF
TMED9
B4GALT7
TOP3B
ZWINT
GTPBP10
MAGOHB
TEPSIN
NDUFAF8
FAM149B1
ECD
AP1G1
EIF4G2
NOXO1
TBL3
RPS2
RNF151
GPN1
CCDC121
EEF1AKMT3
PEX14
DFFA
MRPS18A
METTL1
CYP27B1
PTCD3
POLR1A
WWP2
NOB1
ZNF614
COMMD2
SPSB3
MRPS34
EME2
NME3
TMEM128
PROX2
ITGB3BP
EFCAB7
STMN3
RTEL1
MED9
PRPF38A
ORC1
SH3YL1
ACP1
RUVBL1
EEFSEC
OSBPL9
MRPL53
CWC25
PNPT1
MAP3K7
MOGS
TERF2IP
KARS1
MRPL35
IMMT
FAM32A
SELENOH
AP3S1
ZSCAN30
SPC25
SDHAF2
CPSF7
VPS41
ITGB1BP1
CPSF3
DNAJA3
CORO7-PAM16
CORO7
ZNF721
PIGG
MAGEB10
NR1H3
ACP2
TBC1D19
PIGS
ALDOC
MRPS35
CMTR1
ATP6V1C1
NXT2
SNRPD3
GUCD1
MTOR
TMEM230
PCNA
GBA
TSSK4
MDP1
CHMP4A
PPP1R15B
TTC31
CCDC142
SLIRP
ALKBH1
AP3S2
ZCCHC10
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
SEC13
OTUB1
SSU72
SEC11A
NUFIP1
GPALPP1
RNF166
CTU2
MRPS23
PSMB2
SRRD
HPS4
MTX1
THBS3
POLR2J2
SPDL1
NFKBIL1
DDX39B
ATP6V1G2
SMG7
DDX49
COPE
NDUFC2-KCTD14
NDUFC2
THBS4
MTX3
RMDN3
GCHFR
REXO4
ADAMTS13
UQCRB
DCP1A
CLDN7
NSA2
GFM2
TDG
C12orf73
RUVBL2
GYS1
GRPEL2
ZKSCAN8
FKBPL
ATF6B
WDR4
ZNF205
ART1
VARS2
GTF2H4
ZNF875
AQR
UBE2L3
PGGT1B
MRPS17
ZNHIT2
FAU
ANAPC5
FAM104B
MRPL3
LCMT1
NME1-NME2
NME1
AMY2A
TM7SF3
MED21
MAPKAPK5
TMA7
CCDC51
ATRIP
MRPS18B
ATAT1
CSTF2T
NAXD
ADAMTS9
CEP162
IMMP1L
ELP4
YY1
MED18
WBP1
INO80B
NHP2
PAF1
TBC1D15
ARMCX5-GPRASP2
GPRASP2
BHLHB9
STK36
RNF25
THOC1
SF3B5
ZNF79
ZBTB11
RPL24
UBE2L6
MYNN
ACTRT3
ZSCAN9
ZNF195
NOLC1
MUC3A
MED27
NDUFA5
THAP10
LRRC49
SLC25A1
PURB
AASDH
PHRF1
SPTLC1
NOL10
DDX19A
PDXK
MRPL52
MMP14
CHM
ANAPC1
PSMC4
TBCK
AIMP1
PWP1
MTRF1
ATXN7L1
NDUFB8
HIF1AN
RAB3GAP1
KLHL7
METRN
HAGHL
CCDC78
ANTKMT
AHCY
MED1
RPLP0
GCN1
MFSD1
DNAJC25-GNG10
DNAJC25
JRK
GPATCH1
DHDDS
TMEM183A
TTC26
KANSL2
MRPL27
EME1
TFIP11
RBM23
TMEM237
SDR39U1
ZNF622
YJU2
BNIP1
NUDT5
CDC123
C6orf89
RPP30
RPAIN
NUP88
GADD45GIP1
PPIL1
OTUD6B
ZNF426
SCAF11
PSME3
BECN1
AGBL4
NDUFAF5
ESF1
FCF1
AREL1
FAF2
EIF4B
PCNP
COQ3
SRSF11
LRRC40
COPS4
POLR2J3
MRPL37
CYB5RL
GSC2
ATP6V1G1
GRN
P2RY11
CCDC106
ZNF581
ZNF580
PPAN-P2RY11
PPAN
ANGPTL6
RNASEH1
ZNF507
TIMM50
RNF10
COQ5
MALSU1
MED25
FUZ
VPS35L
HTRA2
DQX1
TYW1
SBDS
GID4
ATPAF2
PRR3
GNL1
POLR3B
TP53I3
SF3B6
FAM228B
WDR20
HSP90AA1
COPZ1
SNX1
CIAO2A
SLC33A1
PHF23
DVL2
OSGEPL1
BORCS7
RBBP5
ZNF594
RPAP1
BRCA1
FAM98B
BMS1
NELFA
CLPTM1L
PFAS
PRRT2
MAZ
NOXA1
CCDC57
SERP1
EIF2A
TSFM
ZNF839