ChIP-Atlas: Target genes

Potential target genes for CPSF6

Query protein: CPSF6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652930 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF6's Target genes

◢ CPSF6: Average

◢ SRX13652927: HeLa

◢ SRX13652928: HeLa

◢ SRX13652929: HeLa

◣ SRX13652930: HeLa

◢ SRX8945050: U2OS

◢ SRX8945056: U2OS

◢ CPSF6: STRING

DUX4
MTRNR2L1
FRG2C
FRG2
POLG
NEMF
ZNF839
LOC102724770
DGCR6
POLR2J3
RS1
PPEF1
FCGR3A
NDUFS7
CCDC200
DPH7
POLR3E
BRMS1
B4GAT1
PRMT5
SACM1L
GTF2IRD2B
TRIP13
BRD9
MPZL1
GSTA4
NOTCH2
SHF
KNL1
SLC39A13
QSOX2
HSPA6
KIFBP
STPG3
NELFB
FAM166A
LRRC37A3
WFIKKN1
METTL26
JRK
METRN
HAGHL
CCDC78
ANTKMT
LTA4H
BRIX1
RPS29
NPR1
ILF2
ZNF184
ICE1
POLR2D
TIA1
PCYOX1
RRN3
OR6S1
CYB561D1
ATXN7L2
PRSS27
HMGN4
NDST2
PAIP1
FBXO4
RPL37
CARD6
NADK2
PGBD2
HES7
ALOXE3
PARG
NOXA1
MARCHF6
CNBP
GTF2H2C_2
GTF2H2C
C8orf37
TRIM44
NME1-NME2
NME1
COA1
ZBED9
PCCB
RAPGEF1
FCGR3B
AURKAIP1
ISY1-RAB43
ISY1
CCT5
ATPSCKMT
SRD5A1
NUF2
POFUT1
PLAGL2
BORCS6
CENPBD1
SELENOT
ZNF84
CLPTM1L
MTF2
AHCY
XYLB
PRRC2A
AIF1
DAZAP2
ELK1
ZC3H7A
CDK5RAP1
RPS14
PSMD9
HPD
TRIM7
TSPYL2
PLXNA1
NDUFS3
KBTBD4
FAM180B
DNAJC11
SERP1
EIF2A
SEC16A
C9orf163
WARS2
LUC7L2
FMC1-LUC7L2
FMC1
PPA1
RELT
ALG10B
DAP
PRCC
FANCD2
SUB1
PPP6C
CASK
ATP5MC2
GUK1
GJC2
PRDM10
H2BC17
H2AC17
OR2B2
HMBS
H2AX
DPAGT1
ECI1
MRPS30
ZER1
FBXW2
TUBGCP5
POLD3
MAP1LC3B
FBXO31
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
UBQLN2
CREG1
TMEM185B
RUVBL1
EEFSEC
SENP5
HTATSF1
BRS3
MYH7B
GSS
OTULIN
SURF6
RRP15
MARCHF5
CPEB3
STX18
ATR
EXOSC10
IMP4
CCDC115
PHKA2
LDLRAD3
ZNF622
MDM4
EIF2S3
GPSM1
CARD9
ZNF124
INPP5E
WDR24
STUB1
JMJD8
YRDC
C1orf122
TADA3
ARPC4-TTLL3
ARPC4
NFYB
GALK2
COPS2
SMIM41
ATG101
TBCCD1
DNAJB11
NIFK
RAB14
GSN
NUDT15
ZC3H10
RPL41
ESYT1
SSNA1
ANAPC2
RELA
PUF60
RBM18
MRRF
TMEM126A
NCOA5
RAB11A
TP53BP2
RPL35
ARPC5L
WDR38
MAPRE1
JUP
CELF1
SLC36A4
DBNDD2
MIS12
DERL2
RAP1B
WDR74
STX5
CHD1L
TAF10
RRP8
ILK
TPP1
NUP214
PAIP2
WDR70
NUP155
TMEM267
PPP6R3
IMMP2L
DPH6
GOLGA1
PRDM11
TAS1R1
NOL9
OR1F1
TRNT1
PGAP2
ATN1
PTPN6
C12orf57
PXYLP1
DNAJC24
DCDC1
RABL2A
UBQLN1
CDKN2AIPNL
USP21
UFC1
CNNM4
PRKAB2
IQCH
AAGAB
ZBED8
HILPDA
FUS
SFT2D3
EIF1
MPHOSPH6
ATP6AP2
BCAR3
SLC44A1
NOD1
WDR33
HPS6
ARMH3
ZNF143
C5orf51
TOR2A
ZNF326
RBM15B
MANF
DCT
RAE1
MTRNR2L3
TBC1D13
TMEM68
TGS1
TSACC
CCT3
MRPS16
DNAJC9
PDZD2
MTRR
FASTKD3
FAM156B
FAM156A
TMEM167B
PARL
FOXD2
MTARC2
SCAND1
PPP1R3F
FOXP3
CIAO3
SNAP47
JMJD4
LRRC59
SPSB3
MRPS34
EME2
NME3
MTMR12
CXorf58
TMEM170A
RBM28
B2M
ASB6
NARF
CYBC1
MRPS5
RNF220
SCRIB
RABL6
TTC9C
HNRNPUL2
ATP6V0C
AMDHD2
HNRNPH1
RSAD1
CHAD
KATNBL1
PRMT6
RHBDL1
TAF4
TARBP1
BMS1
TMEM199
SEBOX
POLDIP2
TMEM9B
RPGR
EIF1AD
CST6
BANF1
HGS
ARL16
TM2D3
SDHAF2
CPSF7
ST3GAL3
DSTYK
EMILIN1
TGFBRAP1
C2orf49
TATDN3
NSL1
OST4
YAP1
CDK20
C18orf25
ZNF107
PSMD3
MMUT
CENPQ
MTCH2
GOLPH3
NME2
PMF1-BGLAP
PMF1
PDCD6IP
KLHL35
DCPS
SDHAF1
WDR36
AP3S2
TARBP2
MAP3K12
ZFP62
NPFF
HCCS
PRR22
DUS3L
ZNF341
CNTRL
C5
GCFC2
C6orf89
SLC35A3
PPIL1
PHF8
URB2
TAF5L
CEP55
CXCL2
POMZP3
STX16
FUBP3
CRY2
RMND5B
SLC38A5
FTSJ1
FYCO1
SELENOS
NCOA4
SARAF
TRIM3
TIMM10B
ARFIP2
BUD13
HENMT1
EXOSC6
C9orf16
MRPL44
MRPL17
TUBGCP3
CSTF1
AURKA
NDUFC2-KCTD14
NDUFC2
PACSIN3
ARFGAP2
NUP160
NECAP2
FAM168B
RNF114
LRIF1
ALKBH3
MAPK8IP3
NBPF1
SNAPC4
RPP40
TM9SF4
RPLP1
HOXD8
NSA2
GFM2
PRDX4
MYO9B
HAUS8
CALM1
POLR3GL
LIX1L
ANKRD34A
MAK16
MRPL55
EXD1
CHP1
ELAC1
PELP1
ARRB2
EIF4EBP2
SLCO4A1
CHERP
WDR5
NOL3
KIAA0895L
EXOC3L1
E2F4
TVP23B
RCE1
YTHDF1
ROMO1
NFS1
ACTB
UQCC2
TENT4A
ZBTB45
TRIM28
MBTPS1
VPS45
CTTNBP2
PARP1
MEF2A
ZNF593
CNKSR1
C1orf232
SETD3
CCNK
SEC61B
ALG2
PPIF
ATG16L1
ROM1
EML3
B3GAT3
ALDH1A3
LIN9
MAOA
MRPL21
IGHMBP2
CAND1
UBE2G2
BICD2
ABCD3
NMNAT1
LZIC
TMEM126B
DLG2
BRPF1
STARD7
PDE7A
GAPVD1
RNF141
PLD3
C19orf47
RPP25
PDCD6
ADK
MKRN2OS
MKRN2
TAF1B
PRKAG1
EEPD1
FKBP9
ZNF783
ERCC3
PRKAR1B
OSMR
MTMR9
USP47
IPPK
PPOX
SMC1A
RIBC1
DDX46
TBK1
ANKS6
TEX46
KDM1A
PPM1G
PNMA1
SECISBP2
CKS2
MPP5
SPATA33
UGGT1
DCP1A
ZNF79
TNKS
MYO10
COMMD1
CCT4
WDR4
MRPS24
PTGES2
NDUFAF3
IMPDH2
DALRD3
FAM228B
TP53I3
SF3B6
SNX11
CBX1
SUV39H1
CEBPA
RPA2
CEP295
ZDHHC5
SPAG9
CCDC83
CAT
TRIP6
SRRT
TRIM65
MRPL38
SKP2
LMBRD2
ATP6V0A2
TOPBP1
TF
PRR25
GNG13
RBM14-RBM4
RBM14
NOS1AP
PYCR2
DCLRE1B
AP4B1
TRAF6
RAG1
AMACR
CHD2
IRF2BP2
THEM4
IBA57
ART1
LIFR
NOTCH2NLB
RPL27A
ARAF
CCDC34
CPLANE1
RICTOR
DGKZ
PRKAA1
NTMT1
C9orf50
COA6
POLE4
XRN1
TMEM79
SMG5
TARS3
PCIF1
SLC27A4
LEKR1
PDXDC1
SDE2
RWDD3
KIF27
MAPKAP1
DNAJC21
ETS1
TEAD1
GCLM
ZWILCH
SNAPC5
RPL4
NGRN
DIDO1
SETX
PRELID3B
CLCC1
ATP5F1E
SYNRG
PHF20
EGLN1
TMEM222
KIF21A
PRSS22
DIP2B
IPP
CTR9
DRAP1
C11orf68
CCDC88A
PPIB
TAF1D
C11orf54
SEMA3C
TUT7
TMEM41A
SMCO4
FAM149B1
ECD
C6orf226
NYX
RNF7
CDC73
ARHGEF5
NR1H3
CCDC138
ACP2
STXBP3
SEC61A1
RPAP3
TRPC4AP
DNAJB12
DAB2
SYP
CCDC153
CBL
ANKH
TTC33
CERS5
EDC4
SCAI
DPY19L4
WDR25
WARS1
ARHGEF11
KRT10
C1orf115
ANKRD36C
S100A13
S100A1
CHTOP
DPP9
RRNAD1
ISG20L2
LIN7C
DTWD2
FAM162A
CCDC58
SNX19
CHAMP1
COQ7
ASH1L
ANKRD36
OTUD7B
ZNF131
NCBP3
TSKU
MRPL3
CENPH
NAT10
DISP3
RPLP0
GCN1
ISCA1
UBAC1
UNK
H3-3B
LRRC58
EIF2D
PCBP2
SRSF6
FPGS
ABL1
ZBTB26
RABGAP1
PARVA
LPCAT1
SLC35F5
SLC27A3
NBN
DYNC2I2
ADPRHL1
DGAT2
SLC35C2
ARFGEF2
CHMP7
MADD
ZYG11B
GXYLT1
DEDD
SNAPIN
RHOT2
TOR1A
USP2
TTLL11
NIPBL
RPS3
TRAP1
FAM102B
DYNC1LI2
DDI2
VPS4A
CPPED1
TMEM250
RINT1
PUS7
POR
PSMD4
ATG16L2
HMGCS1
CDK5RAP2
TPRN
TMEM203
NDOR1
SURF4
CLYBL
PHF2
SPIN1
TSC1
GFI1B
PPIA
LOC100287896
LIPT2
MXI1
LUC7L
FAM234A
NLRX1
VDAC2
NDUFAF6
GMPS
SH2D3C
EBAG9
TMEM141
FAM3C
CCDC183
SPOUT1
PHF19
TIMELESS
MIP
GFM1
AARS2
GLIS2
USP15
SMARCB1
GET4
STOM
DHX36
CZIB
NCOA3
H4C12
H4C11
H2BC15
H2AC15
ZFAND4
CSRNP2
WDR13
TTC23
LRRC28
EED
SPTAN1
IQGAP1
RAC3
PROC
PDCL3
OXCT1
DCXR
SENP1
PFKM
MMP24OS
MMP24-AS1-EDEM2
TXNDC11
JRKL
CIZ1
CCDC82
PREX1
AVPI1
REXO4
ADAMTS13
FAM133B
HMCES
CREBZF
STRBP
DESI2
AKIRIN1
PANK3
SLC35E2B
LHX9
GTF2A2
C1orf53
MANBAL
GHITM
THOC3
THAP12
GVQW3
KLHL15
SYS1
ITGB5
YY1AP1
MAN2C1
DAP3
PTGER4
CROCC
TKFC
SEC24A
DDB1
TIPRL
HOXC12
GDF5
CEP250
NUDT4
NOTCH2NLA
HNRNPF
SNRPD2
PRC1
ZNF202
CEP126
ANGPTL5
USP20
FXN
C9orf78
SIRT1
SLC2A8
ACER3
USE1
MRPL48
OSER1
TOR1B
SVBP
ERMAP
CIPC
RXYLT1
ZMPSTE24
TMCO2
CSE1L
PDHX
MED10
APIP
VPS52
RPS18
GEMIN8
B3GALT4
ZNF239
SS18L1
PSMA7
ARL6IP1
ZBTB6
RC3H2
EXOC3
TMEM109
PRPF19
CTPS2
SDHA
CCDC127
TEKT2
GOLGA5
CREM
ADPRS
ZNF487
CRBN
EFCAB2
ARHGAP29
IPO13
ERCC6
POLA1
COG2
BCAP29
P4HA3
FAM76B
CEP57
SPPL2A
CDC16
C7orf25
TAF15
LIMS1
DNM1
ARHGEF35
TSPAN10
SAMD8
NPLOC4
INKA2
DUSP13
DDX20
BASP1
FBXO22
ERCC6L2
SCYL1
UBE2V2
NOMO2
NUP133
ADO
ITGB1BP1
CPSF3
TMEM14B
SHC1
SEC11A
PYGO2
PBXIP1
PARK7
LOC101928120
ZNF774
H3C13
H2BC18
UNC50
COA5
RAB22A
PSRC1
CLTC
RNF19A
NAXE
GPATCH4
DYNLRB1
SPECC1L
PANX1
ANTXRL
ZFX
FUT11
CHCHD1
ZBTB34
TRIM33
SP1
POLD2
ANKRD40
SEC13
CD79A
ARHGEF1
ZNF408
TMEM87B
ARHGAP1
EPHX1
TMED9
B4GALT7
SRSF4
MICU2
H2BC21
H2AC21
H2AC20
GPSM2
CLASRP
ZNF652
RBM6
MON1A
TSNAX
FBF1
CBWD2
GRSF1
GINS4
KCTD5
ARL8B
SF3A1
LEMD2
FAM227B
DTWD1
CCDC157
KLHL12
ABCA3
RALGDS
COA7
ZNFX1
RNPS1