ChIP-Atlas: Target genes

Potential target genes for CPSF6

Query protein: CPSF6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652929 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF6's Target genes

◢ CPSF6: Average

◢ SRX13652927: HeLa

◢ SRX13652928: HeLa

◣ SRX13652929: HeLa

◢ SRX13652930: HeLa

◢ SRX8945050: U2OS

◢ SRX8945056: U2OS

◢ CPSF6: STRING

DUX4
MTRNR2L1
FRG2C
FRG2
POLR2J3
CCDC200
NPR1
ILF2
ZNF839
NDUFS7
RAB11A
POLG
WFIKKN1
METTL26
LOC102724770
DGCR6
DRAP1
C11orf68
RS1
PPEF1
PCCB
FCGR3A
IBA57
HSPA6
DIDO1
POLR3E
RPS29
QSOX2
HMGN4
SLC39A13
PAIP1
TARS3
AURKAIP1
TRIP13
BRD9
LIFR
NEMF
DCT
H2BC17
H2AC17
OR2B2
OSMR
CYB561D1
ATXN7L2
POFUT1
PLAGL2
NFATC3
SHF
KNTC1
TMEM185B
FBXO4
FBXW2
BRIX1
RPL12
LRSAM1
C8orf37
ZNF184
GSTA4
MTRR
FASTKD3
WDR70
NUP155
TAF4
RPL5
MARCHF6
DDX46
NBPF1
BRMS1
B4GAT1
MYO10
PMPCA
ENTR1
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
NOXA1
COMMD2
MIS12
DERL2
SACM1L
KNL1
STPG3
NELFB
FAM166A
DAP
DPP9
PCIF1
POLE4
ZER1
ATP6V0C
AMDHD2
SLC35F5
TRAP1
GTF3C5
BORCS6
MTCH2
TRIM7
TMEM186
PMM2
NDUFAF6
TRIM33
LTA4H
LUC7L2
FMC1-LUC7L2
FMC1
GTF2IRD2B
TMEM79
SMG5
PDZD2
TOR1A
RXFP4
KHDC4
NCOA7
H4C12
H4C11
H2BC15
H2AC15
PPM1G
PPP6R3
NDUFS3
KBTBD4
FAM180B
SLC36A4
CLPTM1L
WDR25
WARS1
GET4
TUBGCP5
SDHAF1
MPZL1
NR1H3
ACP2
SREK1
RPN1
RAPGEF1
SMARCB1
NDUFAB1
HYOU1
EXOSC10
MTF2
PAAF1
COA4
NCBP3
NUDT4
NXF1
ZFP36
PLEKHG2
DIP2B
PUF60
RUVBL1
EEFSEC
RABL2A
AHRR
PIH1D2
NKAPD1
RPL37
CARD6
TMEM109
PRPF19
SLC35E2B
RGS14
LMAN2
SUB1
TSC1
GFI1B
PHLDA3
ASB6
CRY2
TMEM262
ZFPL1
CDCA5
IRF2BP2
ICE1
ALG10B
LAMP1
SURF2
SURF1
RPL7A
MED22
TMEM199
SEBOX
POLDIP2
POR
MDM4
GCFC2
UBE3B
TMEM132A
WARS2
TSPAN10
NPLOC4
ZNF408
ARHGAP1
ISY1-RAB43
ISY1
PLXDC1
SDHAF2
CPSF7
NUP160
DBNDD2
NOTCH2NLB
UNK
H3-3B
ARFGEF2
RXYLT1
MTMR12
EDC4
BCAR3
AKIRIN1
OR1F1
SRSF7
CXorf58
NR4A1
ANKRD36C
DGAT2
CSE1L
TIA1
PCYOX1
DPH7
ARAF
SCAND1
ARL14EP
RBM3
SECISBP2
CKS2
SPIN1
SLC44A1
SYS1
RAB14
GSN
DUSP2
ASTL
MYBL2
WDR43
MAPK8IP3
NARF
CYBC1
FAM156B
FAM156A
SEC16A
C9orf163
RNF169
SFT2D3
PRMT5
LRRC37A3
UBQLN1
PTAR1
SMC1A
RIBC1
NDUFS6
MRPL36
PRAG1
MRPL20
CCNL2
HEATR1
NTMT1
C9orf50
FANCA
SCARB2
FAM47E
TIMM10
SMTNL1
OTULIN
SLC20A1
TMEM18
SNX19
RCE1
HNRNPL
LOC100287896
LIPT2
TMEM167B
ZC3H10
RPL41
ESYT1
TSNARE1
TTYH2
RPL38
AXIN1
ERICH4
DMAC2
ZNF341
VPS4A
PPIA
ERCC6L2
UBE2V2
ZBTB45
NUP188
DOLK
CCDC112
SLC27A5
ZBED9
RPAP3
RSAD1
CHAD
SLC35C2
MRPL48
SAMD4B
GMFG
AHCTF1
GPLD1
ALDH5A1
NCKIPSD
NGRN
CNNM4
HMBS
ABCD3
TEKT2
ADPRS
H2AX
DPAGT1
PRMT3
TMEM126A
SS18L1
PSMA7
NDUFB7
KLF4
MRPS2
C9orf116
ZMAT1
USP21
UFC1
PPOX
TP53BP2
RNF220
UQCC2
ADPGK
YRDC
C1orf122
BROX
AIDA
NIFK
XRN1
TAF1D
C11orf54
USP2
TTLL11
RPS3
SIRT1
CD79A
ARHGEF1
VPS26A
CEP63
ANAPC13
RAE1
MTRNR2L3
TEAD1
ORC5
MRPS22
KIF27
TTC9C
HNRNPUL2
UPF1
VARS2
GTF2H4
XRRA1
SPCS2
SRD5A1
MRPS5
YAP1
MED10
MAPK8
SF3A3
CHERP
EIF1AD
CST6
BANF1
TBCA
TAF10
RRP8
ILK
CDKN2AIPNL
TRAF6
RAG1
TPP1
PMVK
NAE1
WDR36
TSFM
NRF1
SPRYD4
TBC1D13
TMEM267
RPL27A
SLC27A4
SELENOT
DNPH1
ATP5MC2
DIABLO
RPP25
RWDD3
ARL8B
GMEB2
MRPL21
IGHMBP2
HCCS
TTLL5
ERG28
NCOA5
CPLANE1
CCT5
ATPSCKMT
EIF1
MRPL44
RITA1
DDX54
VPS35
VPS26B
NCAPD3
PDXDC1
RPL35
ARPC5L
WDR38
RINT1
PUS7
GFM1
FH
MYBPC3
PGP
MLST8
CASKIN1
BRICD5
TMEM102
SPEM3
FGF11
CHRNB1
TRIM44
RHBDL1
PSMD9
HPD
AGL
ZDHHC17
WDR24
STUB1
JMJD8
NIPA2
SLC12A7
NMD3
TJP3
PIP5K1C
SSNA1
ANAPC2
PSRC1
NAXE
GPATCH4
ZFR
AMFR
TAF13
MED16
JRK
PPP1R3F
FOXP3
TOR2A
LUC7L
FAM234A
GHITM
CEP295
UNC45B
NLE1
PSMF1
TCTE3
ERMARD
PAM16
CCDC59
HUWE1
SKP2
LMBRD2
YTHDF1
PGBD2
TTI1
RPRD1B
BICD1
AAR2
GNA11
SSBP1
AMACR
KIF21A
SEMA3C
HNRNPH1
S100A13
S100A1
CHTOP
TSKU
WDR13
SNAP47
JMJD4
ATF3
PIGX
CEP19
TATDN3
NSL1
CPSF6
GOLGA3
TCTA
RHOA
SERP1
EIF2A
TAS1R1
NOL9
RNASEH1
SDK1
TPRA1
MCM2
SCRIB
BRWD1
NANS
KDM4D
CWC15
MAP3K2
THG1L
SPDYE14
SPDYE10P
PRSS27
NDST2
LRRC58
ITGB1BP1
CPSF3
RBM18
MRRF
ZC3H8
SLC25A32
DCAF13
AFF1
UQCRFS1
RNF187
NRIP1
WBP11
C12orf60
PANX1
CBWD2
UGGT1
COX20
PMF1-BGLAP
PMF1
ACSF3
ZNF670
FUS
NOCT
ATAD2
DNAJB12
TBRG1
AHCY
ZNF318
DUSP12
EAPP
LSM14A
PDPR
MTR
UTP18
MBTD1
RPL13
FANCL
LIN7C
OXCT1
FAM133B
TOR1B
C7orf25
NOMO2
ABCA3
COA7
NOMO3
ABCC6
SART1
RGPD8
RGPD5
PYCR3
GFUS
ABTB1
IPPK
SCARF2
THEM4
LDLRAD3
CNBP
GUK1
GJC2
TENT4A
AARS2
WDR41
ZNF783
RPUSD4
FAM118B
C9orf40
HEMK1
C3orf18
HSPA5
PRKAA1
POLR2D
ARHGEF11
STRBP
CCDC14
STMN3
RTEL1
PSD3
MRPL17
TBCCD1
DNAJB11
ATP6V0A2
UCK2
THUMPD1
TSPAN13
GLO1
KHDRBS1
STIMATE-MUSTN1
STIMATE
RTTN
AMBRA1
SETX
CLCC1
PHF20
KIFBP
PARK7
SF3A1
CCDC157
DPP8
URB2
TAF5L
MORC3
RRN3
DHCR24
SUCLG2
COA1
PRADC1
CCT7
EEF1AKMT2
ABRAXAS2
PPP6C
NYX
ANKH
NAT10
BMS1
HNRNPF
TMEM14B
CCDC97
LPGAT1
ADAR
POLR3B
USP7
CTNNBL1
ZNF746
GPX1
SMCO4
ELK1
DYNC2I2
SLC35A3
POLA1
DSTYK
SERF1B
SERF1A
RANBP2
MARK2
TMEM117
ZNF84
RHNO1
FOXM1
FAM72C
MRPS15
SEC22B
INTS2
MRPS16
DNAJC9
CCDC34
TTC33
ADPRHL1
MANBAL
ZNF124
MBTPS2
XPNPEP1
XPC
LSM3
NUP214
MSANTD2
DNAJC25-GNG10
DNAJC25
YBEY
MCM3AP
NT5C
CABLES2
PAM
MAP4K4
WDR5B
C5orf51
CTR9
FAM162A
CCDC58
ANKRD36
SRSF6
SLC27A3
USP15
SAMD8
DUSP13
HENMT1
RNPS1
GPR107
MAOA
TRNT1
NDUFAF3
IMPDH2
DALRD3
EFCAB14
DHRS12
EXOC2
EGLN2
NTAN1
TRUB2
COQ4
UQCC3
LBHD1
ZNF319
USB1
SLC15A4
UBXN1
SLC25A13
RICTOR
ISCA1
ZNF239
PAXX
LCNL1
CLIC3
ZNF485
DOLPP1
RNF168
ODC1
RNF149
DCAF1
CLPP
GINS1
STX16
IPP
CCDC138
NOTCH2NLC
TEX261
SPACA9
AK8
PLEKHF2
CKAP5
HTRA2
DQX1
ARL2
NT5C3A
WBP1
INO80B
VPS26C
ZSWIM1
SPATA25
NEURL2
CTSA
GRB2
ECM1
DLAT
ZNF585B
ZNF383
RBM4
CHAMP1
PARVA
MAPRE1
FDX1
POGK
COPS7A
ACTR10
POLR3D
PSMD6
SLC66A3
LSM6
TTC21B
DECR1
TMEM41A
TM2D3
DNAJC11
TTC23
LRRC28
EFCAB2
TM7SF3
MED21
XYLB
TP53RK
SLC13A3
EIF4EBP2
CBWD6
CBWD5
CBWD3
HIC2
SMIM13
SLC39A4
CPSF1
STRIP2
SLC7A6
NDUFC1
NAA15
MAFF
SEC61A1
GPSM2
URGCP
UBE2D4
TECPR2
CINP
MTIF2
FAM168A
EXD1
CHP1
SUGCT
MPLKIP
NXPH3
COG1
ZNF79
MYNN
ACTRT3
LEO1
FBXW4
TXNDC17
KIAA0753
PDCD6
RNF7
ASH1L
DDI2
EIF2S3
RAC3
DCXR
THOC3
CIAO3
SRSF4
CFAP410
FAM118A
DCPS
MRPS30
MICAL2
LCN12
FBXW5
C8G
FAM168B
NOL8
CENPP
H3-3A
RPS19
ITFG2
SRPRB
CCNT1
DNAJC24
DCDC1
ZMYND19
MAPKAP1
TMEM68
TGS1
STAG1
MRI1
C19orf53
PDCD2
TAF12
MRPS31
DZIP1L
USP31
ZDHHC7
SLC2A13
MAGOH
IL4I1
FCGR3B
TUT7
TARBP1
PACSIN3
ARFGAP2
CIZ1
DNM1
FAM228B
TP53I3
SF3B6
METRN
HAGHL
CCDC78
ANTKMT
EDF1
EHMT1
PSMD12
FGGY
OAZ3
MRPL9
DEPDC1
WWP2
PMPCB
PFDN2
NIT1
UBE2G2
C16orf72
GTPBP8
CCNH
ZNF131
EBAG9
CHD1L
REXO4
ADAMTS13
PDHX
APIP
SPPL2A
TAF15
C7orf26
ZDHHC5
UNC45A
HDDC3
RPS15A
PSMC4
SMARCC2
AMZ2
NOB1
FLVCR1
ZBTB33
SRGAP2
FAM72A
ZBED5
TMEM101
TRMT61A
CKB
ATP6V1FNB
ATP6V1F
SRSF3
NBN
ATG16L2
SEC24A
CDC16
PHF8
ERI1
ZC3H6
CACTIN
URI1
ZNF571
ZNF540
DGKZ
AP3S2
PRKAB2
TIPRL
EXOSC6
FRA10AC1
OLFML2A
NR6A1
TOMM34
STK4
CLCN7
NAGK
USP30
SLC35A2
PIM2
ZDHHC12
PODXL
ATN1
FAM98C
PTPN6
C12orf57
ACTB
GLCE
PCDHGA1
TAF7
ADO
FUT11
CHCHD1
LEMD2
TAB3
ACOT7
TNPO1
LZTR1
KIF22
VHL
VIRMA
NOC4L
DDX51
CDC73
ARHGEF5
ABL1
FAM227B
DTWD1
SDC4
SNF8
C2orf42
PPP2R3A
SLC7A5
USPL1
HMGB1
RPS6KA3
RDH5
ITGA7
BLOC1S1
NSMF
R3HCC1L
PPP6R2
METTL18
C1orf112
MXI1
CRBN
AMOTL2
TMC7
NFYC
SLCO4A1
INTS1
ZNF180
C12orf50
C12orf29
TMEM217
TMCO6
TBC1D22B
NDUFA2
IK
RAB6A
CNTRL