ChIP-Atlas: Target genes

Potential target genes for CPSF6

Query protein: CPSF6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8945056 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CPSF6's Target genes

◢ CPSF6: Average

◢ SRX13652927: HeLa

◢ SRX13652928: HeLa

◢ SRX13652929: HeLa

◢ SRX13652930: HeLa

◢ SRX8945050: U2OS

◣ SRX8945056: U2OS

◢ CPSF6: STRING

DUX4
FRG2C
ART1
FRG2
LOC102724770
DGCR6
COL23A1
CCDC200
H2BC5
H1-4
MTRNR2L1
POLR2J3
SLC39A13
ZNF839
RS1
PPEF1
PAIP1
DPH7
AMACR
MARCHF6
ZER1
POLG
ASB6
CHD2
SECISBP2
CKS2
CYB561D1
ATXN7L2
FBXW2
PRSS27
IRF2BP2
LRRC37A3
FBXO4
POLR3E
GTF2IRD2B
MTMR12
AURKAIP1
TRIP13
BRD9
NIFK
MRPS16
DNAJC9
BRIX1
TBC1D13
THEM4
IBA57
MPZL1
PDCD6
QSOX2
NCOA5
TRIM44
C5orf51
LIFR
NEMF
NOTCH2
CELF1
STPG3
NELFB
FAM166A
NDST2
ZNF341
MTCH2
NOTCH2NLB
WDR70
NUP155
TMEM267
RPL27A
WFIKKN1
METTL26
ARAF
CCDC34
PCCB
SSNA1
ANAPC2
OSMR
SLC36A4
CPLANE1
DAP
RICTOR
DGKZ
SCAND1
PRKAA1
NTMT1
C9orf50
MAPK8IP3
TMEM185B
SELENOS
COA6
POLE4
RAPGEF1
SUB1
PPP6R3
XRN1
NADK2
RPL37
CARD6
OTULIN
TMEM79
SMG5
CENPBD1
NARF
CYBC1
POFUT1
PLAGL2
JRK
ROM1
EML3
B3GAT3
TARS3
PCIF1
SLC27A4
NDUFS3
KBTBD4
FAM180B
ICE1
LEKR1
PDZD2
PDXDC1
SDE2
NOXA1
RWDD3
KIF27
MAPKAP1
DNAJC21
CCT5
ATPSCKMT
NDUFS7
ETS1
TEAD1
PPP6C
CNTRL
C5
GCLM
PHKA2
ZWILCH
SNAPC5
RPL4
RHBDL1
NGRN
DIDO1
SETX
PRELID3B
CLCC1
ATP5F1E
SYNRG
PHF20
USP21
UFC1
NBPF1
EGLN1
TMEM222
CNNM4
TTC9C
HNRNPUL2
KIF21A
SRD5A1
PRSS22
POLR2D
RELA
MAP1LC3B
FBXO31
GSTA4
STX16
DIP2B
TRIM65
RPS29
MRPL38
IPP
CTR9
DRAP1
C11orf68
MRPS5
CCDC88A
PPOX
NCOA4
LDLRAD3
PPIB
CNBP
TAF1D
CXorf58
C11orf54
SEMA3C
NUF2
TUT7
TMEM41A
TAF4
ATP6V0C
AMDHD2
SMCO4
TM2D3
FAM149B1
ECD
C6orf226
NYX
SKP2
LMBRD2
DNAJC11
MTRR
FASTKD3
RNF7
RAB11A
TP53BP2
CDC73
ELK1
PPP1R3F
FOXP3
ARHGEF5
ADK
GUK1
GJC2
NR1H3
CCDC138
ACP2
STXBP3
HMBS
SEC61A1
RPAP3
TRPC4AP
FAM156B
FAM156A
DNAJB12
DAB2
SYP
CCDC153
CBL
ANKH
HNRNPH1
TTC33
CERS5
EDC4
TARBP1
RNF220
SCAI
DPY19L4
GOLGA1
WDR25
WARS1
ARHGEF11
KRT10
C1orf115
ANKRD36C
TOR2A
S100A13
S100A1
CHTOP
DPP9
RRNAD1
ISG20L2
LIN7C
DTWD2
FAM162A
CCDC58
SNX19
CHAMP1
COQ7
ASH1L
ANKRD36
OTUD7B
ZNF131
NCBP3
TSKU
RSAD1
CHAD
MRPL3
CENPH
NAT10
MYO10
DISP3
RPL35
ARPC5L
WDR38
TVP23B
RPLP0
GCN1
ISCA1
UBAC1
UNK
H3-3B
LRRC58
EIF2D
PRCC
PCBP2
SRSF6
FPGS
GOLPH3
UQCC2
ECI1
ABL1
SFT2D3
MKRN2OS
MKRN2
ZBTB26
RABGAP1
PARVA
LPCAT1
SLC35F5
PRDX4
SLC27A3
NBN
MTMR9
ZC3H7A
DYNC2I2
ADPRHL1
DGAT2
BMS1
SLC35C2
ARFGEF2
CHMP7
CLPTM1L
ATR
MADD
ZYG11B
ZNF622
GXYLT1
DEDD
SNAPIN
RHOT2
TOR1A
USP2
TTLL11
NIPBL
RUVBL1
RPS3
EEFSEC
TRAP1
MAPRE1
FAM102B
SERP1
EIF2A
DYNC1LI2
TMEM199
SEBOX
POLDIP2
DDI2
VPS4A
TENT4A
CPPED1
TMEM250
RINT1
PUS7
POR
MDM4
RCE1
PRDM11
RABL2A
PSMD4
ATG16L2
HMGCS1
CDK5RAP2
TPRN
TMEM203
NDOR1
UBQLN1
TMEM68
TGS1
SURF4
CLYBL
PHF2
SPIN1
TSC1
GFI1B
PPIA
LOC100287896
LIPT2
MXI1
BCAR3
SMIM41
ATG101
SURF6
GCFC2
LUC7L
FAM234A
NLRX1
HPS6
ARMH3
VDAC2
C6orf89
NDUFAF6
GMPS
SH2D3C
EBAG9
AP3S2
TMEM141
PRRC2A
FAM3C
CCDC183
AIF1
SPOUT1
SELENOT
PHF19
TIMELESS
PUF60
MIP
GFM1
AARS2
GLIS2
USP15
SMARCB1
GET4
STOM
DHX36
CZIB
NCOA3
EIF2S3
H4C12
H4C11
H2BC15
H2AC15
PACSIN3
CHD1L
ARFGAP2
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
ZFAND4
CSRNP2
SLC35A3
PRKAB2
WDR13
TTC23
LRRC28
EED
SPTAN1
IQGAP1
YAP1
RAC3
PROC
PDCL3
OXCT1
DCXR
SENP1
PFKM
MMP24OS
MMP24-AS1-EDEM2
TXNDC11
MTF2
JRKL
CIZ1
CCDC82
BICD2
PXYLP1
PREX1
FUBP3
AVPI1
TAS1R1
NOL9
REXO4
ADAMTS13
FAM133B
YTHDF1
HMCES
CREBZF
STRBP
DESI2
PSMD9
HPD
AKIRIN1
PANK3
SDHAF2
CPSF7
SLC35E2B
OR1F1
LHX9
GTF2A2
C1orf53
SLC44A1
MANBAL
GHITM
THOC3
THAP12
GVQW3
KLHL15
ST3GAL3
SYS1
ITGB5
ZNF143
YY1AP1
MAN2C1
DAP3
SACM1L
PTGER4
CROCC
CIAO3
TKFC
SNAP47
SEC24A
JMJD4
DDB1
TIPRL
TAF10
RRP8
ILK
HOXC12
GDF5
FCGR3A
CEP250
NUDT4
NOTCH2NLA
HNRNPF
SNRPD2
PRC1
ZNF202
CEP126
ANGPTL5
PTGES2
USP20
FXN
C9orf78
TAF1B
SIRT1
SLC2A8
ACER3
USE1
MYO9B
MRPL48
HAUS8
OSER1
UBQLN2
TOR1B
SVBP
ERMAP
GPSM1
CIPC
CARD9
RXYLT1
ZMPSTE24
TMCO2
CSE1L
PDHX
MED10
APIP
ABCD3
VPS52
RPS18
GEMIN8
B3GALT4
ZNF239
SS18L1
PSMA7
CASK
ARL6IP1
ZBTB6
RC3H2
PGBD2
KIFBP
EXOC3
TMEM109
PRPF19
CTPS2
SDHA
CCDC127
TEKT2
GOLGA5
CREM
ADPRS
ZNF487
NUP160
CRBN
EFCAB2
ARHGAP29
IPO13
ERCC6
PRKAG1
POLA1
COG2
CDKN2AIPNL
CEP295
BCAP29
P4HA3
FAM76B
CEP57
TMEM9B
PSMD3
SPPL2A
CDC16
C7orf25
TAF15
LIMS1
DNM1
ZNF124
ARHGEF35
GAPVD1
TSPAN10
SAMD8
NPLOC4
IQCH
INKA2
DUSP13
DDX20
AAGAB
BASP1
FBXO22
FAM228B
ERCC6L2
SCYL1
UBE2V2
RAB14
NOMO2
GSN
NUP133
ADO
ITGB1BP1
CPSF3
TMEM14B
SHC1
SEC11A
PYGO2
PBXIP1
PARK7
LOC101928120
ZNF774
BRMS1
H3C13
H2BC18
UNC50
COA5
RAB22A
TRAF6
RAG1
SENP5
PSRC1
DSTYK
CLTC
RPGR
RNF19A
NAXE
GPATCH4
NOS1AP
DYNLRB1
SPECC1L
TPP1
RBM18
PANX1
MRRF
ANTXRL
ZFX
FUT11
CHCHD1
ZBTB34
TRIM33
HENMT1
SP1
PPIL1
POLD2
ANKRD40
SEC13
CD79A
ARHGEF1
ZNF408
TMEM87B
ARHGAP1
EPHX1
PRDM10
EIF1
TMEM167B
HSPA6
TMED9
DBNDD2
B4GALT7
SRSF4
MICU2
H2BC21
H2AC21
H2AC20
GPSM2
CLASRP
ZNF652
RBM6
MON1A
TP53I3
SF3B6
TSNAX
PHF8
FBF1
CBWD2
GRSF1
GINS4
KCTD5
ARL8B
SF3A1
METRN
LEMD2
HAGHL
FAM227B
DTWD1
CCDC78
CCDC157
ANTKMT
KLHL12
ABCA3
TEX46
KDM1A
RALGDS
COA7
SARAF
ZNFX1
RNPS1
PTPN1
FCHSD2
MCU
CREG1
ALDH1A3
TMCO3
DCUN1D2
CHMP4B
VPS37C
ANGEL1
NOTCH2NLC
UNC45B
NLE1
EXOSC6
AGL
TRIM7
PSMF1
MARK1
ZNF195
SMARCD1
NMNAT1
LZIC
TSN
SREK1
RTF2
TBRG1
TMEM170A
FRA10AC1
CATSPERE
ADSS2
VPS26A
ENDOD1
TSPYL2
FDX1
CFAP410
ATF3
TEX261
TBC1D10C
RELT
RAD9A
PPP1CA
MPP5
DLGAP4
CLPB
SNRNP200
ZNF740
NDUFAB1
CSAD
SUMF2
SLC20A1
FH
RPN2
PTAR1
MROH8
PPARD
ROPN1L
CEP63
C9orf16
ANAPC13
SMC1A
RIBC1
POMZP3
NAA60
CDK5RAP1
ANKRD10
PARP1
NDUFS6
MRPL36
ASNS
UHMK1
PLXNA1
PAXX
LCNL1
COX5A
CLIC3
TAB3
HLCS
ASH2L
SRP9
NOMO3
IER3
FLOT1
EEF2K
AHCYL1
ACOT7
ABCC6
RHEB
PIP4K2B
TUBA1C
SRRM2
AMOTL2
AMOTL1
MSTO1
ZMIZ2
OLFML2A
NR6A1
NPIPA3
NPIPA2
ZNF76
ANKRD36B
ADI1
TRAF3IP3
APPL2
UPF1
UGCG
PURA
SPATA33
URGCP
UBE2D4
PMPCA
FAM207A
ENTR1
DNPH1
TNS2
SDC4
NME2
TMEM126B
PSMG1
MBTPS2
DLG2
CAPN2
NUDT15
AHCY
RPS5
FAM118A
CALM1
PRSS33
MYBPC3
MRPL40
HIRA
ELOB
B4GAT1
UGGT1
ATF7-NPFF
ATF7
SLC35F3
PGPEP1L
KATNBL1
SRGAP1
HACD2
ZBTB45
STAG1
POGK
HTATSF1
GTF2H2C_2
GTF2H2C
DR1
COMMD2
CCDC97
BRS3
UAP1
SSU72
RNF14
DPP8
BRD3OS
AFF4
TMC7
OVCA2
ZNF485
GATAD1
DOLPP1
CARMIL1
ATMIN
MOSPD2
FANCB
ZDHHC17
PSEN2
TARBP2
MAP3K12
ERI1
RAB8A
GALNT18
DDX46
DDB2
MYLK
LANCL2
TOMM34
STK4
SNAPC4
GNPTAB
ZFR
EEPD1
CAPRIN2
SNF8
VDR
H2AX
DPAGT1
AAAS
OPN3
CMBL
CHML
TFAM
ACACA
TECPR2
RSRP1
RAP1A
CINP
CD99
CCDC91
ACAD9
JAGN1
GMEB2
PPP2R3B
CUL2
TM7SF3
RASA2
MED21
BOLA3
POLR3GL
MTCH1
LIX1L
ANKRD34A
ANKRD33B
ZNF697
XPNPEP1
TTC4
SYF2
SRCAP
NIT2
LOC730183
ZNF488
TMEM132A
SAYSD1
MRTO4
INPP5E
EMC1
XYLB
TNPO1
SART1
PIK3CB
GTF3C5
CA5B
CTNNAL1
MTHFS
LINS1
BAG2
ASB7
NUP188
DOLK
ZNF41
TMEM106B
RNASEH2C
KAT5
TRAM2
HS1BP3
DTX2
ANKRD39
PGBD1
NXF1
IMMP2L
FTH1
DPH6
ZNF326
AMFR
RRP15
RETREG1
PON2
MTIF2
GATAD2A
CDON
CCDC14
TMEM47
PCTP
PIGV
NFYC
NAA35
LIN9
FKBP9
TERF2
PRSS23
PIGX
CEP19
CDIP1
ASPSCR1
RALB
MED13L
MET
ZFP62
MAPK8
FOXJ2
COQ9
CIAPIN1
ASCC1
ANAPC16
WDR41
SAR1A
KLHL35
GPR107
DPH5
WDR24
STUB1
SERF1B
SERF1A
JMJD8
HDHD5
ALG6
RGPD8
RGPD5
NRAS
NDUFB7