ChIP-Atlas: Target genes

Potential target genes for RFX3

Query protein: RFX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2636179 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RFX3's Target genes

◢ RFX3: Average

◣ SRX2636179: Hep G2

◢ SRX2636180: Hep G2

◢ SRX23177031: PLC/PRF/5

◢ SRX23177032: PLC/PRF/5

◢ RFX3: STRING

C1orf159
NPAS4
ZBBX
CFAP54
TMEM9
DYNC2LI1
NEK10
CHURC1-FNTB
CHURC1
ZNF497
PRR29
LRRC6
MFSD4B
WFDC3
DNTTIP1
TTC23L
ACOX3
AHI1
POLL
DPCD
FOXJ1
ZNF84
TEKT1
POLD3
EBNA1BP2
CFAP57
RUNDC1
PTGES3L-AARSD1
PTGES3L
C11orf49
KLHL18
KIF9
POLRMT
CFAP36
CEP41
TTLL1
USP30
SDCBP2
PES1
PDE4A
LRGUK
DAD1
LOC112694756
DNAAF3
SNRPF
CARS1
BBS1
ITFG2
ANKRD42
AP1S1
NPHP1
DYNC2H1
HSDL1
DNAAF1
ZSWIM1
C16orf46
BTBD3
RFC5
SHQ1
TOR2A
ADGB
DYNC2I1
HSP90B1
FANK1
CSNK1G2
C7orf50
STK32C
LRRC27
PMVK
RAB11FIP2
IQCH
AAGAB
QTRT2
CCDC191
JAM3
INTU
EFHC1
EFCAB12
PIN1
FZR1
FAM110A
OVCA2
KIF3B
CEP112
CCDC34
AGTRAP
FKBPL
UBXN11
BRCA1
ARL6
MRPS2
C9orf116
DYNLRB2
PSMC3IP
PIFO
THNSL1
ARFGAP1
RNF141
MRPL10
LRRC46
MEAK7
NRSN2
DAGLA
ZNF324B
UBXN6
IPO4
ABI2
ARMC3
CCDC113
LMBRD1
RALB
SLF1
KIAA0825
WDR93
PEX11A
KATNIP
GTF3C1
SPEF1
SYS1
ACTR6
SIK3
PRKN
PACRG
TRIT1
DCP1B
CFAP69
BDP1
SPAG8
THTPA
NME9
FBXW9
DMWD
TTC30A
SPEF2
CSNK1G1
RPL35A
IQCG
KIF23
UBE2O
AANAT
DYNLL1
MYG1
NUCB2
STOML2
TXNDC17
KIAA0753
LENG1
LZTFL1
CHN1
FAM161A
HSPH1
TTF1
MORN4
WDR35
STK11IP
FAM204A
CCDC39
LRPAP1
OTUB1
AZIN2
TSNAXIP1
RANBP10
AGPAT5
XKR7
DNAJC1
PKIG
YIPF3
POLR1C
CYTH2
MIB2
RSPH1
ZNF324
NR2F2
CFAP43
TRIP12
FBXO36
GTF2E2
ANGEL1
SPAG16
NCOA5
HMG20B
SEMA4B
RPP38
TP53BP1
E4F1
CTU1
B9D1
IQSEC3
MOCS3
DPM1
RSPH14
MAFA
DUSP3
TSEN2
IQCC
KRT8
DNAH7
PCOTH
MIPEP
TOM1L2
DRC3
SF3A1
CCDC157
CHCHD3
TMF1
ENDOV
CRNKL1
CFAP61
ULK4
C2orf73
PRKAR1B
SMG7
SRFBP1
CALR3
C19orf44
YWHAQ
C17orf97
TBCEL-TECTA
TBCEL
POMT2
GSTZ1
RHPN1
RND2
ETFRF1
CFAP94
SYT5
ABAT
MORN2
DHX57
NUDT2
KIF24
RNF40
CCDC189
CATIP
TSPYL4
DSE
TTC30B
PTPN1
DNAJC16
PPAN-P2RY11
PPAN
PREPL
CAMKMT
RFC2
ZC3H10
SORBS2
TRIM36
TADA2B
CCDC96
COG7
MBD4
IFT122
LRRC73
PPP1R21
ELMOD2
MOK
SF1
YWHAE
PRKAR1A
RALGAPA1
PHC1
SIPA1L1
PRMT5
LRRC56
PROSER3
HSPB6
IQANK1
FAM83H
TMEM231
IFT81
WDR54
C2orf81
TMEM107
TASP1
ZNF473
VRK3
CACUL1
CCDC130
POFUT2
KIAA1841
FAAP24
CEP89
TMX4
RFX1
RNF139
OSCP1
C20orf96
DNAH2
FBXL13
ARMC10
PACRGL
SLC25A14
KIF6
IFT172
SPATA2
RTF2
CPLANE2
METTL15
KIF18A
CFAP53
U2AF2
ODF3L1
WDR73
DNAJA1
APTX
SPATA4
GAS8
ANO3
SFXN2
ARL3
DRC7
ING2
CEP162
SPATA13
ZNF584
NME7
BLZF1
RPS27A
CLHC1
NUMA1
LRTOMT
L3MBTL2
CLUAP1
CEP152
IFT22
DYRK1A
ORAI3
DYRK3
CCDC30
KNOP1
MIER1
DNAI4
ID1
TMEM53
ARMH1
FAM183A
ZNF768
NAA40
PHOSPHO2
CCDC173
SPICE1
CFAP126
TSGA10
C2orf15
PUM1
CCDC65
ENTPD5
BBOF1
FSIP1
ACAP2
STK19
DXO
SAXO2
EFL1
SGTA
WHRN
PPP1R11
PCSK1N
MORN3
USP54
LOC728392
ELP1
ABITRAM
BBS5
GTF3C4
DDX31
KMT5C
NDUFA5
PRKCSH
CCDC151
DYNC2I2
TRAF3IP1
IFT57
MKS1
LINS1
ASB7
DNAJB13
RHBDD2
MCM7
AP4M1
BTRC
TBC1D32
C20orf27
PCGF1
UBN2
HMGN2
PICK1
TMEM67
CFAP46
CXADR
INTS8
TCTN3
TNPO1
CFAP58
MSMO1
MARCHF8
RABL2B
FANCI
ARL4A
LOC101928764
PAK4
MNS1
FBXW7
PRDM4
TPGS1
MRPS21
AMPD2
TM9SF1
FAM214A
FOXN2
POLI
TTC26
RFX3
PCNX4
EIF2S2
TIGD4
ARFIP1
NDUFS3
KBTBD4
MAP3K14
SLC25A3
TULP3
ARRDC4
CENPH
PCGF2
DUSP18
RPGRIP1L
FTO
EFTUD2
CCDC103
GPR137
BAD
CDK4
NET1
UBXN2B
TFIP11
VTA1
NMBR
YWHAZ
MUL1
PGD
TBC1D19
PEF1
ODF2
COQ7
ITSN1
CRYZL1
ZNF184
SPG21
TRUB2
COQ4
REEP6
PCSK4
THAP10
LRRC49
MLEC
TCTN2
HSPBP1
PARS2
TMEM234
EIF3I
PPP1R42
LMAN2L
ZFYVE28
CFAP99
EFCAB10
C11orf97
FAM86B1
ALS2
C16orf71
ANKS3
HTR5A
CCDC175
C16orf86
PPP2R1A
TEX9
NEK11
ASTE1
SPCS1
GLT8D1
UVRAG
FOXO6
CFAP20
PIH1D2
NKAPD1
SPATA24
TRAPPC2L
GALNS
PKP4
CCDC148
RPN1
HMGCR
WDR90
COPS3
SDE2
TMED8
SAMD15
GLRX5
RBKS
BABAM2
AXDND1
E2F3
RRP12
ERICH6
ERF
EHD1
FAM86B2
SPATA18
CATSPERG
LPIN2
DCAF15
CCDC74A
MICOS10-NBL1
MICOS10
VPS53
NEK2
HIGD2B
BBS4
NAT14
RNF5
AGPAT1
KIAA0319
CCDC146
PIK3R2
PELI1
BCL2L1
CEP295NL
GOLGB1
ZNF446
CELSR3
ZNF24
PANK2
CFAP298-TCP10L
CFAP298
ZIM2
PEG3
NAA20
LTV1
TENT5C
RUFY2
RER1
MORN1
WWOX
FAM151B
CYC1
CCDC57
ZNF862
COPB2
ZNF165
TBC1D16
CCDC40
MAPRE3
CEP135
NQO1
CCPG1
C15orf65
ZNHIT1
PLOD3
HSPA12A
ENO4
DUSP6
DNAAF2
MCAT
QTRT1
MZF1
TDRP
IFT74
SLC25A27
CYP39A1
CDC37
MYCBP
SETD4
SPACA9
AK8
ITGB3BP
EFCAB7
SREK1
BSG
IQCE
FAM47E-STBD1
FAM47E
ZEB1
TMEM91
B9D2
C7orf57
DSTN
BFSP1
STK36
RNF25
CNOT8
CYP46A1
CEP164
DENND2B
MPZL3
CALML4
ERI3
LOC390877
GTF2F1
SHOC2
BBIP1
CFAP157
FAM120B
THBS3
MTX1
KIFC3
DNAJC10
CYSTM1
SPATA17
GPATCH2
TNRC6A
EPN1
DNAH6
SERTAD3
RIN1
PPP1R16A
CHERP
TRMT12
EIF2S1
ATP6V1D
SIK1B
SIK1
MARK3
UBL3
TIMM21
FBXO15
ARL13B
FAM185A
UFSP2
STK16
GLB1L
NAP1L1
FOXN3
SRSF7
DNAJC24
DCDC1
FAM227B
DTWD1
E2F8
GEMIN8
MTRNR2L2
TRIM39
FAM174A
DNAL1
ZNF76
NAA38
CYB5D1
MSH5
EMC3
PRR3
GNL1
CEP126
SYVN1
TOGARAM1
KLHL28
TOR3A
BRD3OS
LYRM4
FARS2
MICOS13
HSD11B1L
C2orf50
PBXIP1
SF3B5
AJM1
HNF4A
TPST1
TUBE1
FAM229B
TREX1
DNAJC25-GNG10
DNAJC25
GNL2
HYDIN
SLC25A46
GPN1
CCDC121
TSPAN19
LRRIQ1
ROPN1L
ZNF664-RFLNA
ZNF664
CCDC92
LIN54
CENPS-CORT
CENPS
BBS12
TECPR2
CINP
JUND
FLACC1
CLIC1
PLIN5
PDCD6
G3BP1
TCTN1
CCP110
POLD2
PPP1R32
CXXC1
DNAH12
SPATA6
POLR3F
DZANK1
POLR3H
FBXL14
GTF2IRD2
HM13
BSCL2
TMEM232
DALRD3
SH3BGR
LCA5L
ZDHHC1
CBX8
MID1IP1
GTF2IRD2B
NBR1
HS1BP3
ARL2BP
BRMS1
ARF3
RUFY1
ESRRA
WIPF2
MEAF6
XPR1
FER
SFI1
MYADM
SPATA7
MPC2
DCAF6
ALMS1
TCTEX1D4
BTBD19
SPAG1
ZMAT2
ING1
C4orf48
LMLN
DHX40
PPP1R7
PASK
CCDC74B
WDTC1
FHAD1
TOB2
ENTPD7
CABIN1
TAGLN2
HSPA1B
CFDP1
ZNHIT2
REPIN1
IFT52
CAPS2
L1CAM
IQUB
PLCH1
GMPPB
PARD6A
ACD
CDC14A
TPM3
TTC7A
MCFD2
WDPCP
MDH1
TEX264
GLRA1
NEMP1
GFER
PNP
WDR25
WARS1
RABL2A
MTF1
PLXNB1
PLTP
CCNB1
CCAR2
INO80B
MED31
C17orf100
IRAK1BP1
KATNAL1
AP2S1
NACAD
EPHA10
ZNF875
SDCBP
MTRNR2L8
COMMD8
WDR19
SLC27A1
PPP5C
TTC5
UBE4B
CCDC83
USP2
PPP2R5E
PRRT1
PPT2
ZNF214
NLRP14
THADA
FASTKD2
PIBF1
DIS3
SMIM5
DNAL4
OR2F1
C1orf194
RAB36
ZNF709
CFAP299
DYRK4
ZBTB40
ZNF396
CEP43
ZNRF1
RSPH4A
PCM1
TMEM209
SPATA33
ALKBH5
LRRC23
P4HA1
PSMB5
ARMC2
AP3D1
KIF27
OXNAD1
DPH3
NUP62CL
DNAAF6
DNAH9
THG1L
TPCN1
IQCD
VPS13C
GET3
WDR13
HAT1
MVK
PDAP1
BUD31
DCAF12
ICA1L
CHD4
L3HYPDH
JKAMP
CPD
TTC8
CFAP74
GABARAPL2
ABHD14A-ACY1
ABHD14A
FAM166C
SNX25
CFAP97
SLC25A22
CDADC1
SSBP2
PTPN13
ZSWIM2
SYBU
PRR7
GALK2
COPS2
CFAP161
TSPAN4
NDUFA8
MORN5
IP6K1
AP1M1
DIXDC1
ZSCAN5A
ATAD3A
STK35
FBXO16
RPF2
KLHDC10
RSPH3
CSTF3
MAN1B1
CLBA1
MED25
TTLL6
MOB3A
IZUMO4
CCS
CCDC87
KTI12
STXBP4
COX11
MAFG
CDKN2A
PPID
JUN
CPLX2
UBXN10
PLA2G2C
SST
UBFD1
EARS2
FAM104B
SS18L2
SEC22C
SSX2IP
NEURL4
GPR135
TMX2
MED19
HNRNPF
C5orf49
PCF11
SLC35E1
KIFBP
UMAD1
SFR1
FSD1L
CROCC2
TMEM8B
FAM221B
CFAP77
IFT88
TSPAN3
ZC4H2
HEATR6
FAM227A
CBY1
ITPK1
PHF20
ARMC9
PPP1R12B
TMEM186
PMM2
SMC1B
RIBC2
ERICH2
KIF14
TRDMT1
FAM160A2
TTLL10
GRWD1
TCTEX1D2
MLF1
SLC30A7
EXTL2
EIF2B2
CD68
RAB37
GAR1
TAF6
CNPY4
ZNF398
RUVBL1
RGS3
TMEM254
AOPEP
DCTN3
SMPD3
STK33
DMTN
BCO2
GPR107
GDPGP1
CIB1
FAM76A
FAM167A
CFAP221
TAOK2
MAPK8IP2
ZNF487
BRWD3
GPSM3
FASN
PNMA1
MICU2
BBS9
CYB5B
NEK5
SMKR1
LCORL
HPCA
PNPT1
FGF1
KIAA0232
IDH2
CIPC
IPO11
CTNNA2
TMED10
TTC21A
GORASP1
NSMF
ZER1
SIRT3
PSMD13