ChIP-Atlas: Target genes

Potential target genes for RFX3

Query protein: RFX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: RFX3 | STRING
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RFX3's Target genes

◢ RFX3: Average

◢ SRX2636179: Hep G2

◢ SRX2636180: Hep G2

◢ SRX23177031: PLC/PRF/5

◢ SRX23177032: PLC/PRF/5

◣ RFX3: STRING

ZBBX
TMEM9
NPAS4
C1orf159
CFAP54
NEK10
LRRC6
ZNF497
CHURC1-FNTB
CHURC1
DYNC2LI1
TTC23L
FOXJ1
POLD3
KLHL18
KIF9
WFDC3
DNTTIP1
PRR29
SDCBP2
ZNF84
CFAP36
BTBD3
RUNDC1
PTGES3L-AARSD1
PTGES3L
CEP41
C11orf49
LRGUK
ACOX3
SNRPF
POLL
DPCD
DAD1
PDE4A
HSDL1
DNAAF1
KIF3B
MFSD4B
AHI1
LOC112694756
PIN1
FKBPL
NPHP1
POLRMT
ZSWIM1
BRCA1
FANK1
DNAAF3
ITFG2
PES1
TOR2A
RAB11FIP2
TEKT1
EBNA1BP2
CFAP57
EFHC1
IPO4
IQCH
AAGAB
DYNC2I1
BBS1
INTU
PMVK
FZR1
DYNLRB2
CARS1
DNAH7
ANKRD42
ACTR6
OVCA2
MRPS2
C9orf116
SPEF1
THTPA
PSMC3IP
CEP112
TTF1
MTRNR2L2
TTLL1
NME9
CSNK1G2
CCDC34
SYS1
C16orf46
USP30
C7orf50
SHQ1
CCDC113
TRIT1
FAM110A
DCP1B
PRKN
PACRG
MEAK7
LMBRD1
RFC5
AGTRAP
QTRT2
CCDC191
ADGB
LRPAP1
HSP90B1
STK32C
LRRC27
CTU1
MORN4
AP1S1
CFAP69
WDR93
PEX11A
UBE2O
JAM3
AANAT
UBXN6
WDR35
ANGEL1
ARFGAP1
ABI2
THNSL1
MYG1
NRSN2
LENG1
UBXN11
CSNK1G1
DAGLA
TSNAXIP1
RANBP10
BDP1
EFCAB12
FBXW9
AZIN2
SLF1
KIAA0825
CFAP43
XKR7
SPAG8
ABAT
MOCS3
DPM1
RSPH14
RALB
TXNDC17
MRPL10
LRRC46
KIAA0753
DYNLL1
AGPAT5
NCOA5
PPP1R21
DYNC2H1
HSPH1
ARL6
RPP38
RPL35A
IQCG
CCDC39
SIK3
TTC30A
KIF23
RSPH1
FAM161A
SPEF2
OTUB1
SPAG16
FAM204A
PREPL
CAMKMT
KATNIP
GTF3C1
PIFO
E4F1
ARMC3
TBCEL-TECTA
TBCEL
STK11IP
LZTFL1
PCOTH
MIPEP
NUCB2
DMWD
RNF141
C2orf73
TRIP12
FBXO36
POMT2
KRT8
GSTZ1
PKIG
ZNF324
NR2F2
STOML2
COG7
MORN2
DHX57
MIB2
B9D1
CALR3
C19orf44
TP53BP1
GTF2E2
CHN1
DNAJC1
ELMOD2
CRNKL1
CFAP61
ENDOV
ZNF324B
DUSP3
ULK4
HMG20B
MAFA
YIPF3
POLR1C
PROSER3
HSPB6
NUDT2
KIF24
IQSEC3
SF3A1
CCDC157
YWHAQ
TSPYL4
DSE
SORBS2
WDR54
C2orf81
RNF40
CCDC189
DNAJC16
PPAN-P2RY11
PPAN
PRKAR1A
KIAA1841
TOM1L2
DRC3
CHCHD3
PTPN1
TTC30B
RALGAPA1
FAAP24
CEP89
GPR137
TMF1
C17orf97
SF1
SIPA1L1
DRC7
CATIP
CYTH2
TMX4
CCDC130
SMG7
RND2
MOK
ETFRF1
CFAP94
RFC2
MBD4
IFT122
SRFBP1
TMEM107
IQANK1
FAM83H
RHPN1
PHC1
CCDC30
TADA2B
CCDC96
TMEM231
DNAH2
C20orf96
ZNF584
CACUL1
LRRC56
TASP1
LRRC73
ZC3H10
KIF6
FBXL13
ARMC10
SEMA4B
PACRGL
TSEN2
PRKAR1B
ZNF473
VRK3
IFT81
RNF139
L3MBTL2
ING2
DYRK1A
ENTPD5
BBOF1
PRMT5
SYT5
FSIP1
SPATA2
CFAP53
CFAP126
NDUFA5
RFX1
ARL4A
ID1
TMEM53
ARMH1
YWHAE
DNAJB13
MIER1
DNAI4
TRIM36
IQCC
GTF3C4
DDX31
DYNC2I2
NAA40
TBC1D19
PRKCSH
CCDC151
PHOSPHO2
CCDC173
ELP1
ABITRAM
SPATA4
KNOP1
IFT22
CFAP58
POFUT2
SGTA
ANO3
RPS27A
CLHC1
WHRN
DNAJA1
APTX
CPLANE2
ZNF184
U2AF2
TTC26
CFAP46
STK19
DXO
RTF2
CEP162
USP54
RFX3
FAM183A
CEP152
BTRC
C20orf27
PAK4
ODF3L1
SPICE1
PCGF1
OSCP1
SLC25A14
FBXW7
LOC101928764
FOXN2
NUMA1
LRTOMT
NDUFS3
KBTBD4
HMGN2
RPGRIP1L
FTO
PCSK1N
IFT172
MKS1
METTL15
KIF18A
POLI
TRAF3IP1
SAXO2
ORAI3
EFL1
ALS2
WDR73
MARCHF8
KMT5C
CLUAP1
TBC1D32
PRDM4
EFCAB10
LOC728392
SPATA13
NME7
BLZF1
TSGA10
C2orf15
CCDC65
PPP1R11
TM9SF1
ARRDC4
ITSN1
CRYZL1
ZNF768
TFIP11
RPN1
SFXN2
FAM214A
ARL3
UBN2
TMEM67
ERF
RHBDD2
REEP6
PCSK4
BBS5
UVRAG
TPGS1
DYRK3
MAP3K14
HMGCR
ODF2
PCNX4
TCTN3
NEK2
LINS1
ASB7
EFTUD2
CCDC103
ACAP2
VTA1
NMBR
MORN3
TNPO1
FANCI
PICK1
CXADR
PPP2R1A
MRPS21
INTS8
C16orf71
BCL2L1
ANKS3
SLC25A27
CYP39A1
PCGF2
DCAF15
TMED8
SAMD15
PUM1
WDR90
YWHAZ
ZNHIT1
PLOD3
PIH1D2
NKAPD1
IQCE
C11orf97
CCDC175
GAS8
C16orf86
TBC1D16
CCDC40
TULP3
MSMO1
BAD
IFT57
ZFYVE28
CFAP99
MZF1
AXDND1
MCM7
AP4M1
COQ7
PIK3R2
MNS1
SPACA9
AK8
HSPBP1
CDK4
THAP10
SLC25A3
LRRC49
LPIN2
SPG21
C7orf57
TENT5C
EIF2S2
ZNF24
MUL1
MLEC
TRAPPC2L
GALNS
NET1
TEX9
AMPD2
FAM151B
RABL2B
RER1
MORN1
TMEM234
EIF3I
PARS2
PKP4
CCDC148
CCDC146
EHD1
CFAP20
SPCS1
GLT8D1
TIGD4
ARFIP1
COPS3
PPP1R16A
RBKS
FOXN3
BABAM2
FAM86B2
SPATA18
PANK2
CATSPERG
TDRP
RRP12
RNF5
NEK11
ASTE1
AGPAT1
CYC1
CFAP298-TCP10L
CFAP298
FAM86B1
MTRNR2L8
CCDC57
MCAT
SPATA24
PEF1
E2F3
CEP295NL
VPS53
PELI1
ZEB1
DUSP18
HIGD2B
BBS4
LMAN2L
CDC37
ALMS1
TCTN2
CCPG1
C15orf65
NAA20
LTV1
ZNF446
MYCBP
CALML4
UBXN2B
ERICH6
MAPRE3
GLRX5
CEP135
KIAA0319
KIFC3
SETD4
CLIC1
FAM185A
CENPH
NAT14
PGD
ITGB3BP
EFCAB7
SRSF7
ZIM2
PEG3
SDE2
DNAAF2
PPP1R42
HTR5A
CCDC74A
SREK1
QTRT1
FOXO6
ZNF165
LOC390877
GTF2F1
RUFY2
MICOS13
HSD11B1L
ZNF664-RFLNA
ZNF664
CCDC92
DUSP6
FAM174A
THBS3
MTX1
RIN1
WWOX
DNAJC10
ZNF862
TECPR2
CINP
EIF2S1
ATP6V1D
IFT74
PRR3
GNL1
CEP126
GOLGB1
HSPA12A
ENO4
SPATA17
GPATCH2
BRD3OS
NQO1
CEP164
TRMT12
E2F8
TRUB2
COQ4
TUBE1
FAM229B
ESRRA
TMEM91
B9D2
DENND2B
STK36
RNF25
CHERP
COPB2
MID1IP1
MICOS10-NBL1
MICOS10
JUND
STK16
GLB1L
UBL3
TNRC6A
MARK3
POLR3F
DZANK1
PLIN5
DNAJC24
DCDC1
NAA38
FAM120B
CYB5D1
FAM227B
DTWD1
DSTN
BFSP1
POLR3H
MPZL3
NAP1L1
ARF3
ROPN1L
HM13
TSPAN19
POLD2
LRRIQ1
EPN1
FLACC1
LYRM4
FARS2
TIMM21
FBXO15
DNAL1
BRMS1
RUFY1
MYADM
GTF2IRD2
CELSR3
SHOC2
BBIP1
CYSTM1
TPST1
TOR3A
AJM1
CYP46A1
BBS12
ZDHHC1
PBXIP1
C2orf50
MSH5
FAM47E-STBD1
FAM47E
ERI3
ZMAT2
HNF4A
BSG
DNAH12
CFAP157
TCTN1
SLC25A46
ZNF76
CCDC74B
SPATA6
SPAG1
PPP2R5E
UFSP2
SIK1B
SIK1
SERTAD3
GTF2IRD2B
TOGARAM1
KLHL28
CNOT8
LMLN
DNAH6
RABL2A
PLCH1
TRIM39
MEAF6
IRAK1BP1
FER
DNAJC25-GNG10
DNAJC25
ARL13B
TEX264
ING1
GNL2
DNAL4
GPN1
CCDC121
C4orf48
CCP110
SF3B5
GLRA1
BSCL2
PDCD6
DALRD3
ENTPD7
XPR1
P4HA1
ICA1L
SFI1
GEMIN8
EMC3
CFAP299
NBR1
MTF1
NEMP1
ARL2BP
SPATA7
SPATA33
WIPF2
HYDIN
ZNF214
NLRP14
SLC27A1
DHX40
REPIN1
TPM3
SYVN1
NACAD
CCNB1
GFER
TTC7A
MCFD2
FASTKD2
CBX8
WDR19
TAGLN2
CENPS-CORT
CENPS
HSPA1B
FHAD1
PLXNB1
TMEM232
SH3BGR
LCA5L
G3BP1
TREX1
STK35
PIBF1
DIS3
FBXL14
PPP5C
CFDP1
ZNHIT2
WDPCP
MDH1
DYRK4
CXXC1
CAPS2
GMPPB
ALKBH5
ZNF875
SLC25A22
LIN54
IFT52
WDTC1
PPP1R7
PASK
CEP43
RSPH4A
KATNAL1
PLTP
TCTEX1D4
L1CAM
BTBD19
PSMB5
PARD6A
ACD
TOB2
TTC5
PPP1R32
NUP62CL
DNAAF6
ZNF396
SMIM5
THG1L
PNP
HS1BP3
KLHDC10
IQUB
RAB36
WDR25
WARS1
SLC35E1
CCAR2
DNAH9
MPC2
INO80B
DCAF6
PCM1
COMMD8
CLBA1
TMEM209
CABIN1
C1orf194
RSPH3
ZNRF1
PCF11
UBE4B
SSX2IP
ZBTB40
WDR13
CDC14A
AP3D1
ARMC2
AP2S1
CPD
PRRT1
PPT2
CHD4
CCDC83
MED31
C17orf100
OR2F1
TMX2
MED19
RPF2
TTC8
GET3
GALK2
COPS2
EPHA10
SDCBP
LRRC23
THADA
TPCN1
IQCD
KIF27
PNMA1
MAFG
JUN
DIXDC1
CFAP74
PRR7
USP2
OXNAD1
NDUFA8
MORN5
DPH3
ZC4H2
UBFD1
GPSM3
EARS2
MED25
CFAP221
HNRNPF
CDADC1
ARMC9
TMEM254
IPO11
GABARAPL2
UMAD1
CDKN2A
CFAP161
UBXN10
PLA2G2C
DCAF12
L3HYPDH
JKAMP
FAM227A
CBY1
SSBP2
FAM166C
ZSCAN5A
VPS13C
ZSWIM2
SNX25
CFAP97
CFAP77
KLF4
IP6K1
TSPAN4
DMTN
SS18L2
SEC22C
CYB5B
LRRC10B
PTPN13
FBXO16
MVK
SYBU
TMEM8B
FAM221B
CPLX2
ABHD14A-ACY1
ABHD14A
PPID
KIFBP
ZNF709
THOP1
SEC61A2
FSD1L
AOPEP
LCORL
TRDMT1
STXBP4
COX11
MLF1
C5orf49
FAM160A2
MOB3A
IZUMO4
PDAP1
BUD31
GAR1
CCS
CCDC87
GRWD1
FAM76A
TAF6
CNPY4
FAM104B
IFT88
SMC1A
RIBC1
SLC30A7
EXTL2
ATAD3A
GPR107
TTC21A
GORASP1
TTLL6
NEURL4
FAM167A
MAK
KTI12
TMEM186
PMM2
DCTN3
PPP1R12B
TOB1
HEATR6
TOMM7
ZNF398
SMPD3
GATAD2A
EIF2B2
ITPK1
KIAA0232
HAT1
FAM161B
COQ6
GPR135
RBBP6
MAN1B1
TCTEX1D2
ERICH2
STK33
SKIV2L
NELFE
KIF14
AP1M1
SMC1B
RIBC2
SFR1
FGF1
WARS2
NEK5
BBS9
FASN
KIAA0895
TAOK2
TTLL10
PODNL1
CD68
FBXL2
RAD50
PIK3R4
ABCB8
SST
CTNNA2
PRR36
MICU2