ChIP-Atlas: Target genes

Potential target genes for RFX3

Query protein: RFX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2636180 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RFX3's Target genes

◢ RFX3: Average

◢ SRX2636179: Hep G2

◣ SRX2636180: Hep G2

◢ SRX23177031: PLC/PRF/5

◢ SRX23177032: PLC/PRF/5

◢ RFX3: STRING

TMEM9
ZBBX
NPAS4
C1orf159
CFAP54
NEK10
LRRC6
KLHL18
KIF9
POLD3
ZNF497
FOXJ1
SDCBP2
CHURC1-FNTB
CHURC1
BTBD3
TTC23L
KIF3B
DYNC2LI1
WFDC3
DNTTIP1
CFAP36
ZNF84
FKBPL
PRR29
HSDL1
DNAAF1
SNRPF
BRCA1
CEP41
DNAH7
LRGUK
PIN1
RUNDC1
PTGES3L-AARSD1
PTGES3L
C11orf49
DAD1
PDE4A
IPO4
ZSWIM1
FANK1
NPHP1
LOC112694756
POLL
DPCD
ACOX3
RAB11FIP2
TTF1
TOR2A
EFHC1
ACTR6
THTPA
DYNLRB2
ITFG2
POLRMT
SPEF1
IQCH
AAGAB
NME9
DNAAF3
DYNC2I1
INTU
CTU1
AHI1
MRPS2
C9orf116
FZR1
PPP1R21
PSMC3IP
PES1
PMVK
SYS1
LRPAP1
MFSD4B
OVCA2
TRIT1
ABAT
CEP112
DCP1B
CCDC113
MORN4
PRKN
PACRG
ANGEL1
CCDC34
LMBRD1
BBS1
WDR35
MEAK7
UBE2O
AANAT
TEKT1
EBNA1BP2
CFAP57
CFAP69
MOCS3
DPM1
RSPH14
CSNK1G2
PREPL
CAMKMT
ANKRD42
CARS1
FAM110A
LENG1
WDR93
PEX11A
MYG1
TSNAXIP1
RANBP10
CFAP43
AGTRAP
C7orf50
UBXN6
XKR7
AZIN2
NCOA5
CSNK1G1
RPP38
AGPAT5
ABI2
SHQ1
C16orf46
QTRT2
CCDC191
TBCEL-TECTA
TBCEL
ARFGAP1
BDP1
TXNDC17
KIAA0753
NRSN2
FBXW9
MTRNR2L2
ADGB
THNSL1
DYNLL1
HSPH1
COG7
SPAG8
HSP90B1
STK32C
LRRC27
DAGLA
TTLL1
CCDC39
RFC5
PCOTH
MIPEP
C2orf73
UBXN11
POMT2
GSTZ1
SLF1
KIAA0825
RSPH1
PROSER3
HSPB6
SPAG16
E4F1
JAM3
ELMOD2
RALB
DRC7
RPL35A
IQCG
KIAA1841
MORN2
DHX57
WDR54
C2orf81
OTUB1
MRPL10
LRRC46
USP30
KRT8
KIF23
FAM161A
TTC30A
FAAP24
CEP89
SIK3
FAM204A
AP1S1
CCDC30
CALR3
C19orf44
SPEF2
PRKAR1A
TRIP12
FBXO36
SORBS2
ARL6
STK11IP
EFCAB12
NUDT2
KIF24
TSPYL4
DSE
RALGAPA1
LZTFL1
TMX4
TBC1D19
ARL4A
CRNKL1
CFAP61
NR2F2
ZNF324
PKIG
NUCB2
DNAJC16
PPAN-P2RY11
PPAN
ZNF584
ENDOV
ULK4
SF1
CCDC130
RNF40
CCDC189
KATNIP
GTF3C1
B9D1
SIPA1L1
ENTPD5
BBOF1
ARMC3
DMWD
YWHAQ
FSIP1
NDUFA5
PTPN1
TP53BP1
TTC30B
CFAP126
SF3A1
CCDC157
DUSP3
MAFA
DNAJB13
MIB2
DNAH2
L3MBTL2
C20orf96
GTF2E2
PIFO
TMEM107
STOML2
ING2
ZNF184
DNAJC1
MOK
IQANK1
FAM83H
KIF6
TMEM53
ARMH1
ID1
IQSEC3
DYNC2H1
RNF141
HMG20B
FBXL13
ARMC10
GTF3C4
DDX31
TOM1L2
DRC3
CHCHD3
PACRGL
MIER1
DNAI4
CFAP53
CHN1
YIPF3
POLR1C
TMEM231
C17orf97
DYNC2I2
MBD4
IFT122
CATIP
PHC1
CACUL1
SPATA2
RFC2
TMF1
TASP1
RNF139
CFAP58
ALS2
LRRC56
PRKCSH
CCDC151
TTC26
RND2
EFCAB10
NAA40
ZNF473
VRK3
ERF
ELP1
ABITRAM
RPN1
ETFRF1
CFAP94
RFX3
SLC25A27
CYP39A1
SMG7
TADA2B
CCDC96
PHOSPHO2
CCDC173
IFT81
IQCE
ALMS1
LRRC73
RFX1
NEK2
RPGRIP1L
FTO
SRFBP1
RHPN1
FOXN2
HMGCR
PRMT5
SGTA
DYRK1A
NDUFS3
KBTBD4
KNOP1
ZNHIT1
PLOD3
ZNF324B
WHRN
CFAP46
UVRAG
ZC3H10
PAK4
FBXW7
BCL2L1
IFT22
TBC1D16
CCDC40
POLI
ITSN1
CRYZL1
MTRNR2L8
MZF1
LOC101928764
SPATA4
C7orf57
BTRC
C20orf27
RPS27A
CLHC1
CYTH2
SPACA9
AK8
DCAF15
PODNL1
STK19
DXO
PCGF1
REEP6
PCSK4
TFIP11
ARRDC4
ANO3
PRDM4
USP54
TM9SF1
YWHAE
FOXN3
HMGN2
TMED8
SAMD15
MARCHF8
FAM183A
DNAJA1
APTX
SYT5
PPP1R16A
PRKAR1B
FAM214A
ODF2
PPP2R1A
SPICE1
WDR90
CPLANE2
MKS1
U2AF2
CEP152
TBC1D32
C16orf71
ANKS3
TRAF3IP1
PIK3R2
PIH1D2
NKAPD1
PCSK1N
CEP162
TRIM36
MAP3K14
TENT5C
CLIC1
TSEN2
KMT5C
EFTUD2
CCDC103
SAXO2
EFL1
POFUT2
ZNF24
VTA1
NMBR
AXDND1
PCNX4
LOC728392
CCDC175
C16orf86
ODF3L1
RTF2
TPGS1
LPIN2
C11orf97
NUMA1
LRTOMT
PPP1R11
FAM151B
CCDC65
TSGA10
C2orf15
SEMA4B
ORAI3
TMEM67
RER1
MORN1
UBN2
CLUAP1
ZFYVE28
CFAP99
RHBDD2
TDRP
YWHAZ
PCGF2
NME7
BLZF1
FAM185A
SLC25A14
WDR73
ZEB1
SPATA13
ZNF768
METTL15
KIF18A
SRSF7
OSCP1
TCTN3
CALML4
CCDC146
MRPS21
MCAT
BBS5
KIFC3
ESRRA
IFT172
CYC1
MICOS13
HSD11B1L
TECPR2
CINP
GPR137
FANCI
BAD
IQCC
TRAPPC2L
GALNS
CDC37
PANK2
CCDC57
HSPBP1
TNPO1
LINS1
ASB7
TULP3
CFAP298-TCP10L
CFAP298
THAP10
LRRC49
EHD1
COQ7
CXADR
MID1IP1
PICK1
MYCBP
SFXN2
ARL3
INTS8
PKP4
CCDC148
CCPG1
C15orf65
FAM174A
DYRK3
RNF5
AGPAT1
TEX9
SPG21
COPS3
RBKS
BABAM2
CEP295NL
CDK4
FAM86B2
SPATA18
CFAP20
CATSPERG
ACAP2
SETD4
MAPRE3
MORN3
LOC390877
GTF2F1
CEP126
MLEC
SPCS1
GLT8D1
NAA20
RRP12
PELI1
ITGB3BP
EFCAB7
LTV1
PRR3
GNL1
CEP135
BRD3OS
MUL1
VPS53
PPP2R5E
ICA1L
RIN1
SLC25A3
HIGD2B
BBS4
POLR3F
DZANK1
MSMO1
TMEM234
EIF3I
ZNF446
ARF3
THBS3
MTX1
EIF2S1
ATP6V1D
E2F3
PARS2
SREK1
MYADM
TUBE1
FAM229B
DNAJC10
DNAAF2
EIF2S2
POLR3H
STK35
SPATA24
BRMS1
PUM1
MNS1
NEK11
ASTE1
RUFY1
NET1
QTRT1
PLIN5
HM13
KIAA0319
SPATA17
GPATCH2
P4HA1
ZIM2
PEG3
E2F8
IFT57
FAM86B1
TRMT12
ZNF165
DNAL4
ERICH6
GTF2IRD2
MCM7
AP4M1
ZMAT2
RABL2A
NAT14
POLD2
SPATA33
GLRX5
DUSP6
CFAP299
IRAK1BP1
CCDC74B
CEP164
RUFY2
CHERP
AMPD2
STK16
GLB1L
LMAN2L
ROPN1L
FLACC1
ZDHHC1
PLCH1
TIGD4
ARFIP1
TSPAN19
LRRIQ1
IFT74
SPAG1
UBL3
NAA38
CYB5D1
MARK3
CCDC74A
ZNF862
TEX264
ZNF664-RFLNA
ZNF664
CCDC92
PEF1
TCTN2
WWOX
DNAJC24
DCDC1
GAS8
ZNF214
NLRP14
DENND2B
FAM227B
DTWD1
GLRA1
SDE2
HSPA12A
ENO4
RABL2B
TNRC6A
LMLN
SLC25A22
STK36
RNF25
LYRM4
FARS2
SLC27A1
TMEM91
B9D2
FASTKD2
SLC35E1
NQO1
NAP1L1
MTF1
BBS12
DNAH12
DNAL1
NEMP1
GTF2IRD2B
DUSP18
NACAD
TPST1
FAM120B
FOXO6
GOLGB1
ING1
WDR19
SPATA6
AJM1
C4orf48
MEAF6
CCNB1
KLHDC10
FER
ENTPD7
PIBF1
DIS3
HTR5A
JUND
TIMM21
FBXO15
TCTN1
TOR3A
DYRK4
UBXN2B
EPN1
PPP1R42
TPM3
PCF11
GFER
PBXIP1
MPZL3
HNF4A
ALKBH5
DSTN
BFSP1
C2orf50
PPP5C
COPB2
SLC25A46
TTC7A
MCFD2
REPIN1
SFI1
PLXNB1
PNMA1
XPR1
PGD
CLBA1
SSX2IP
MSH5
SPATA7
CEP43
DALRD3
DHX40
RSPH4A
CENPH
PSMB5
RSPH3
BSCL2
TAGLN2
HSPA1B
IPO11
CYSTM1
NUP62CL
DNAAF6
THG1L
NBR1
WIPF2
ZNF76
SHOC2
BBIP1
ARL2BP
TMX2
MED19
GPSM3
FHAD1
WDPCP
MDH1
THOP1
ZNF875
CCP110
MICOS10-NBL1
MICOS10
TOGARAM1
KLHL28
ZNF396
CFDP1
ZNHIT2
KLF4
CYP46A1
CFAP221
GMPPB
PDCD6
UFSP2
DNAJC25-GNG10
DNAJC25
CAPS2
LRRC10B
SMC1A
RIBC1
ERI3
GPN1
CCDC121
DNAH9
GNL2
CBX8
KATNAL1
TTC5
SMIM5
CFAP157
SIK1B
SIK1
SEC61A2
TMEM254
ZC4H2
PLTP
SH3BGR
LCA5L
SF3B5
FAM47E-STBD1
FAM47E
TRIM39
RPF2
SERTAD3
TMEM232
RAB36
MAK
PCM1
CYB5B
BSG
IFT52
ARMC9
WDR13
CPD
JUN
DNAH6
CELSR3
MAFG
TMEM209
PARD6A
ACD
ARL13B
HYDIN
L1CAM
DMTN
UBFD1
EARS2
TOMM7
FAM227A
CBY1
CHD4
GALK2
COPS2
UMAD1
WDTC1
PPP1R7
PASK
FBXL14
CNOT8
HNRNPF
LCORL
EMC3
PNP
C1orf194
ZNRF1
TRUB2
COQ4
GEMIN8
CENPS-CORT
CENPS
TTC8
G3BP1
AP3D1
TTC21A
GORASP1
TOB2
DIXDC1
MED25
ARMC2
TCTEX1D4
BTBD19
CCAR2
SYVN1
ZBTB40
GET3
CFAP77
WDR25
WARS1
COMMD8
CDKN2A
INO80B
UBXN10
PLA2G2C
CXXC1
PIK3R4
ABCB8
IQUB
ALPK3
AOPEP
DNALI1
TREX1
NDUFA8
MORN5
UBE4B
PRR7
LRRC70
FAM76A
CFAP74
MLF1
TPCN1
IQCD
SS18L2
SEC22C
TRDMT1
FBXL2
TMEM8B
FAM221B
FAM160A2
GAR1
RBBP6
TAF6
CNPY4
GRWD1
GPR107
PSMB7
EFHD2
FAM161B
COQ6
RPL22L1
FAM167A
OR2F1
SLC30A7
EXTL2
FSD1L
KIF27
CDADC1
ZSCAN5A
KIFBP
LRRC23
PRRT1
PPT2
CFAP161
AP2S1
CCDC83
CPLX2
DDX3X
FANCF
SKIV2L
NELFE
GABARAPL2
ODC1
DCTN3
LIN54
HS1BP3
KIAA0232
ZBTB48
C5orf49
PRR36
KIAA0895
MPC2
DCAF6
WARS2
SSBP2
PPP1R32
PPID
IFT88
TOB1
CABIN1
ZNF432
FBXO16
ZNF398
FAM166C
ANKEF1
ZSWIM2
GFPT2
TECR
DNAJB1
CDC14A
OXNAD1
DPH3
L3HYPDH
JKAMP
IP6K1
THADA
DCAF12
SNX25
CFAP97
SMPD3
MED31
C17orf100
TSPAN4
TMEM186
PMM2
RAD50
STXBP4
COX11
FAM104B
PPP1R12B
FGF1
EIF5
UBE2Z
KCNAB2
WRNIP1
TAF1A
PEX5
EPHA10
SDCBP
HEATR6
CCDC181
HNRNPH2
PTPN13
MOB3A
IZUMO4
GATAD2A
XRCC1
PINLYP
COPZ1
CCS
CCDC87
NEK5
TXNL4B
DHX38
ARRDC3
EIF2B2
CDK7
VPS13C
NEURL4
THEGL