ChIP-Atlas: Target genes

Potential target genes for RFX3

Query protein: RFX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2636180 | Hep G2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RFX3's Target genes

◢ RFX3: Average

◢ SRX2636179: Hep G2

◣ SRX2636180: Hep G2

◢ SRX23177031: PLC/PRF/5

◢ SRX23177032: PLC/PRF/5

◢ RFX3: STRING

TMEM9
ZBBX
NPAS4
C1orf159
CFAP54
NEK10
LRRC6
KLHL18
KIF9
POLD3
ZNF497
A1BG
NDRG4
FOXJ1
SDCBP2
CHURC1-FNTB
CHURC1
BTBD3
TTC23L
YIF1A
TMEM151A
KIF3B
DUSP15
DYNC2LI1
WFDC3
DNTTIP1
ZBTB46
CFAP36
ZNF84
FKBPL
ATF6B
PRR29
ICAM2
HSDL1
DNAAF1
PITPNM1
SNRPF
BRCA1
CEP41
DNAH7
LRGUK
UBL5
PIN1
RUNDC1
PTGES3L-AARSD1
PTGES3L
C11orf49
DAD1
ABHD4
PDE4A
TM9SF1
IPO4
ZSWIM1
SPATA25
FANK1
NPHP1
MTLN
LOC112694756
POLL
DPCD
ACOX3
RAB11FIP2
TTF1
CFAP77
SPATA2L
TOR2A
EFHC1
ACTR6
ZFHX2
THTPA
DYNLRB2
ITFG2
POLRMT
FGF22
SPEF1
CENPB
CDC25B
IQCH
AAGAB
NME9
TNNI3
DNAAF3
DYNC2I1
INTU
CTU1
AHI1
MRPS2
C9orf116
FZR1
DOHH
PPP1R21
PSMC3IP
PES1
PMVK
SYS1
LRPAP1
MFSD4B
RHOD
OVCA2
TRIT1
ABAT
PRKCG
CEP112
DCP1B
CCDC8
CCDC113
PI4K2A
MORN4
PRKN
PACRG
ACACB
ANGEL1
S100B
QTRT1
CCDC34
LMBRD1
BBS1
WDR35
ZNF584
RNF225
MEAK7
CRB2
UBE2O
AANAT
TEKT1
EBNA1BP2
CFAP57
CAMK2N1
CFAP69
MOCS3
DPM1
RSPH14
RAB36
CSNK1G2
PREPL
CAMKMT
ANKRD42
CARS1
FAM110A
LENG1
WDR93
PEX11A
PFDN5
MYG1
TSNAXIP1
RANBP10
CFAP43
AGTRAP
C7orf50
UBXN6
XKR7
AZIN2
LARGE1
NCOA5
CSNK1G1
PATZ1
RPP38
ACBD7
AGPAT5
EPHX3
ABI2
POR
SHQ1
C16orf46
STK32C
QTRT2
CCDC191
TBCEL-TECTA
TBCEL
ARFGAP1
BDP1
TXNDC17
KIAA0753
NRSN2
GNG14
FBXW9
MTRNR2L2
MSH3
DHFR
ADGB
THNSL1
DYNLL1
HSPH1
COG7
SPAG8
HINT2
HSP90B1
LRRC27
DAGLA
TTLL1
CCDC39
RFC5
PCOTH
MIPEP
C1QTNF9B
C2orf73
UBXN11
TRAPPC9
POMT2
GSTZ1
SLF1
KIAA0825
SLC37A1
RSPH1
PROSER3
LIN37
HSPB6
SPAG16
PGP
E4F1
JAM3
ELMOD2
FAM24A
RALB
DRC7
RPL35A
LMLN
IQCG
KIAA1841
MORN2
DHX57
WDR54
C2orf81
OTUB1
SCRN2
OSBPL7
MRPL10
LRRC46
USP30
KRT8
KIF23
FAM161A
TTC30A
FAAP24
CEP89
SIK3
FAM204A
AP1S1
ZMYND12
PPCS
CCDC30
CALR3
C19orf44
LIN28A
SPEF2
PRKAR1A
TRIP12
FBXO36
SORBS2
ARL6
STK11IP
EFCAB12
C11orf94
NR1D1
NUDT2
KIF24
TSPYL4
DSE
RALGAPA1
LZTFL1
TMX4
TBC1D19
ARL4A
CRNKL1
CFAP61
NR2F2
ZNF446
ZNF324
SERINC3
PKIG
NUCB2
DNAJC16
CASP9
PPAN-P2RY11
PPAN
P2RY11
ANGPTL6
ENDOV
ULK4
ALLC
SPTBN2
ZFP90
SF1
CCDC130
RNF40
CCDC189
KATNIP
GTF3C1
B9D1
SIPA1L1
ENTPD5
BBOF1
MTRNR2L1
ARMC3
DMWD
YWHAQ
FSIP1
INSM2
NDUFA5
PTPN1
TP53BP1
MAP1A
TTC30B
CFAP126
SF3A1
CCDC157
DUSP3
CFAP97D1
MAFA
DNAJB13
MIB2
DNAH2
L3MBTL2
ZCCHC3
C20orf96
GTF2E2
PIFO
PER2
TMEM107
STOML2
PIGO
FAM214B
ING2
BSPRY
ZNF184
DNAJC1
MOK
IQANK1
FAM83H
KIF6
TMEM53
ARMH1
ID1
IQSEC3
DYNC2H1
RNF141
HMG20B
FBXL13
ARMC10
GTF3C4
DDX31
TOM1L2
DRC3
CHCHD3
PACRGL
MIER1
DNAI4
CFAP53
METRN
FBXL16
CHN1
YIPF3
POLR1C
LRRC73
TMEM231
GABARAPL2
C17orf97
KLHL38
DYNC2I2
MBD4
IFT122
GRIN1
CATIP
PHC1
CACUL1
SPATA2
RFC2
TMF1
TASP1
RNF139
CFAP58
ALS2
LRRC56
HRAS
PRKCSH
CCDC151
TTC26
VAT1
RND2
EFCAB10
NAA40
ZNF473
VRK3
ERF
ELP1
ABITRAM
RPN1
ETFRF1
CFAP94
RFX3
SLC25A27
CYP39A1
SMG7
JUNB
TADA2B
CCDC96
PHOSPHO2
CCDC173
DLG4
ACADVL
IFT81
IQCE
BRAT1
ALMS1
H1-10
RFX1
NEK2
RPGRIP1L
FTO
TMEM211
DNAAF4
SRFBP1
NYAP1
TOP1MT
RHPN1
ID2
FOXN2
HMGCR
PRMT5
THOP1
SGTA
DYRK1A
NDUFS3
KBTBD4
FAM180B
KNOP1
IQCK
ZNHIT1
PLOD3
ZNF324B
WHRN
CFAP46
UVRAG
ZC3H10
RPL41
ESYT1
PAK4
FBXW7
BCL2L1
IFT22
TBC1D16
CCDC40
POLI
ITSN1
CRYZL1
MTRNR2L8
NQO2
MZF1
LOC101928764
SPATA4
SUN3
C7orf57
BTRC
C20orf27
RPS27A
CLHC1
CYTH2
SPACA9
AK8
PODNL1
DCAF15
STK19
LOC110384692
DXO
C4B_2
C4B
C4A
TLX2
PCGF1
LBX2
REEP6
PCSK4
TFIP11
ARRDC4
ANO3
PRDM4
USP54
YWHAE
IFT140
CRAMP1
FOXN3
HMGN2
TMED8
SAMD15
MARCHF8
FAM183A
GSG1
DNAJA1
APTX
DUSP1
RPS5
SYT5
PPP1R16A
FOXH1
PRKAR1B
NECTIN4
FAM214A
ODF2
PPP2R1A
SPICE1
WDR90
CPLANE2
MKS1
DUX4
KCNH7
U2AF2
CCDC106
CEP152
TBC1D32
C16orf71
ANKS3
TRAF3IP1
PIK3R2
PIH1D2
NKAPD1
PCSK1N
ERAS
MUC1
PALM3
CEP162
TRIM36
MAP3K14
SLCO2B1
TENT5C
MSH5
DDAH2
CLIC1
TSEN2
KMT5C
FAM187A
EFTUD2
CCDC103
SAXO2
EFL1
PBX3
POFUT2
ZNF24
VTA1
NMBR
AXDND1
PCNX4
LOC728392
CCDC175
PARD6A
C16orf86
ACD
ODF3L1
RTF2
TPGS1
LPIN2
C11orf97
SSBP4
NUMA1
LRTOMT
RNF39
PPP1R11
POLR1H
FAM151B
CCDC65
PJA2
TSGA10
C2orf15
SEMA4B
SETD1A
ORAI3
TMEM67
RER1
MORN1
UBN2
ARHGDIB
CLUAP1
C16orf90
ZFYVE28
CFAP99
RHBDD2
C3orf49
SPAG9
TDRP
YWHAZ
PCGF2
NME7
BLZF1
FAM185A
SLC25A14
WDR73
NMB
ZEB1
SPATA13
ZNF768
ZNF747
METTL15
KIF18A
SRSF7
OSCP1
LRRC23
TCTN3
CALML4
CCDC146
MRPS21
TSPO
MCAT
BBS5
LOC388282
KIFC3
ESRRA
CATSPERZ
IFT172
GCKR
FNDC4
CCDC187
MAF1
CYC1
RPL36
MICOS13
HSD11B1L
TECPR2
CINP
GPR137
FANCI
KCNK4
BAD
IQCC
DCDC2B
CCDC28B
TRAPPC2L
GALNS
DAAM1
CDC37
PANK2
CCDC57
HSPBP1
BRSK1
TNPO1
LINS1
ASB7
MX2
TULP3
PRR7
DBN1
CFAP298-TCP10L
CFAP298
MFSD6
THAP10
LRRC49
EHD1
AHNAK
COQ7
CXADR
MID1IP1
PICK1
MYCBP
GJA9
SFXN2
ARL3
INTS8
PKP4
CCDC148
WDR1
CCPG1
C15orf65
FAM174A
DYRK3
RNF5
AGPAT1
AGER
TEX9
SPG21
COPS3
RBKS
BABAM2
CEP295NL
TSPAN31
MARCHF9
CDK4
FAM86B2
SPATA18
NAGPA
CFAP20
CATSPERG
ACAP2
SETD4
CBR1
MAPRE3
MORN3
ZC3H18
LOC390877
GTF2F1
CEP126
ANGPTL5
MLEC
SPCS1
GLT8D1
NAA20
RRP12
PELI1
MAP1LC3A
ITGB3BP
EFCAB7
LTV1
DZIP1
PRR3
GNL1
CEP135
BRD3OS
ATP23
MUL1
PLEKHB1
VPS53
PPP2R5E
ICA1L
KLF16
RIN1
BRMS1
SLC25A3
HIGD2B
BBS4
POLR3F
DZANK1
MSMO1
TMEM234
EIF3I
ARF3
THBS3
MTX1
EIF2S1
ATP6V1D
E2F3
MYADM
ZNF579
PARS2
SREK1
TUBE1
FAM229B
DNAJC10
DNAAF2
EIF2S2
KDELR3
KCNJ4
FAM131C
POLR3H
STK35
SPATA24
PROB1
B4GAT1
PUM1
MNS1
NEK11
ASTE1
OSBPL2
RUFY1
TUBAL3
NET1
PLIN5
LRG1
HM13
KIAA0319
NKX1-1
KIAA1522
SPATA17
GPATCH2
P4HA1
ZIM2
PEG3
ZNF775
FBF1
E2F8
IFT57
FAM86B1
TRMT12
ZNF165
OR1F12
DNAL4
FRG2C
TMEM74B
ERICH6
BAIAP2
GTF2IRD2
MCM7
AP4M1
ZMAT2
HARS2
HARS1
RABL2A
ZNF628
SSC5D
NAT14
POLD2
SPATA33
GLRX5
DUSP6
CFAP299
IRAK1BP1
CCDC74B
CEP164
RUFY2
CHERP
GNAT2
AMPD2
TUBA4B
TUBA4A
STK16
GLB1L
LMAN2L
ROPN1L
FLACC1
ZDHHC1
PLCH1
TIGD4
ARFIP1
TSPAN19
LRRIQ1
PLAA
IFT74
TEDC1
CRIP2
CRIP1
SPAG1
POLR2K
RNF223
UBL3
TMEM88
NAA38
CYB5D1
MARK3
RASL10A
GAS2L1
BAIAP3
CCDC74A
ZNF862
TEX264
ZNF664-RFLNA
ZNF664
CCDC92
PEF1
TCTN2
WWOX
DNAJC24
DCDC1
GAS8
DBNDD1
ERCC1
ZNF214
NLRP14
HSBP1
DENND2B
FAM227B
DTWD1
GLRA1
SDE2
HSPA12A
ENO4
RABL2B
TNRC6A
SLC25A22
PIDD1
CEND1
STK36
RNF25
LYRM4
FARS2
ST18
MFRP
C1QTNF5
SLC27A1
NXNL1
TMEM91
B9D2
FASTKD2
SLC35E1
NQO1
NAP1L1
C12orf43
MTF1
INKA2
BBS12
DNAH12
DNAL1
NEMP1
GTF2IRD2B
DUSP18
NACAD
TPST1
FAM120B
FOXO6
GOLGB1
ING1
CARS2
WDR19
SPATA6
PHPT1
AJM1
C4orf48
MEAF6
CCNB1
KLHDC10
MAMDC2
RAB3GAP1
FER
ENTPD7
PIBF1
DIS3
HTR5A
JUND
IQCN
TIMM21
FBXO15
TCTN1
TOR3A
DYRK4
UBXN2B
EPN1
PPP1R42
TPM3
PCF11
SYNGR3
NOXO1
GFER
PYGO2
PBXIP1
LOC101928120
MPZL3
HNF4A
KCNN1
ALKBH5
DSTN
BFSP1
C2orf50
PPP5C
COPB2
SLC25A46
TTC7A
MCFD2
REPIN1
SFI1
EIF4ENIF1
PLXNB1
PNMA1
XPR1
PGD
CLBA1
AHNAK2
SSX2IP
SPATA7
CRYAA2
CRYAA
CEP43
NDUFAF3
DALRD3
DHX40
MBNL2
AIP
RSPH4A
CENPH
PLA2G2A
PSMB5
PSMB11
SRF
CUL9
RSPH3
GNG3
BSCL2
TAGLN2
CDX2
HSPA1B
IPO11
DIMT1
CYSTM1
NUP62CL
DNAAF6
CCP110
THG1L
MNT
NBR1
WIPF2
ZNF76
LOC102724770
DGCR6
SHOC2
BBIP1
ARL2BP
MRPL24
HDGF
TMX2
MED19
PBX2
GPSM3
FHAD1
WDPCP
MDH1
ZNF875
FAM174C
CIRBP
MICOS10-NBL1
MICOS10
TOGARAM1
KLHL28
ZNF396
TMEM95
KCTD11
CFDP1