ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741418 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX16386912: 293

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX15039987: MDA-MB-231

◢ SRX15039988: MDA-MB-231

◢ SRX15039990: MDA-MB-231

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◣ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX15039983: T-47D

◢ SRX15039985: T-47D

◢ SRX15039986: T-47D

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

CCIN
PTPRF
CCDC107
TBC1D4
MTRNR2L8
LPIN1
GTF2H4
BORCS7
TRMT10A
MTTP
SPAAR
ZMAT2
HLA-E
PSMB6
UBE2V2
ZNF335
PIH1D1
ALDH16A1
MRPL45
NEURL4
VPS37D
RNF24
OSCAR
NDUFA3
CYRIB
RNF216
RASA2
RXRA
PRMT1
CRYAA2
CRYAA
MELK
AHCY
NLRX1
SLC35E2A
YWHAG
TOR1A
SLC39A11
MTRNR2L2
MSH3
DHFR
FBXO43
NR6A1
OLFML2A
CDK12
C19orf25
PMEPA1
SMU1
MEF2D
PLIN3
HCAR3
LSP1
STOML2
HAS1
MRFAP1L1
TESK1
DLAT
RIN2
UBE2L3
KXD1
RAC1
ENGASE
RPS14
ARHGEF1
MSMP
DPH5
TGM2
NUDT9
FBXW5
C8G
PIGO
ZNF638
ZNHIT6
EPRS1
PAXX
CLIC3
UTP25
SMCO4
TOMM7
UBFD1
EARS2
XKR8
DRG2
EPS15
SLC29A3
ADRM1
TEF
WDR43
ZFAND1
ALDH3B1
UNC93B1
ZCCHC4
DNAJC19
CLPB
SMARCD2
AKIRIN2
KDM3B
SP2
PRR5L
COMMD9
DNM2
KRT15
CAVIN1
CTNNBL1
AARS2
CDC25B
PTK2B
MTRNR2L1
UIMC1
MATR3
HEATR3
ZDHHC24
ACTN3
PTPN1
HAX1
SPATA2
SETD1A
EED
TKT
SEPTIN9
TENT2
MED23
CLTA
SIT1
ST3GAL4
DYM
MLLT1
SLC25A16
SERPINB1
MCC
MT1M
MT1E
PSMD4
MEGF9
RUSC2
STK10
PKD2L2
WDR74
ZMYM1
ZDHHC12
TJP3
PRPSAP1
PDSS2
SLC31A1
FKBP15
SOGA1
ARHGEF39
FXN
EFR3A
SPAG8
HINT2
SRRD
HPS4
ZCCHC14
HRCT1
COASY
MLX
AARSD1
PLD1
SPAG4
ATG4C
TIMM10
RIF1
WDR59
LOC730098
CCL27
FKBPL
ATF6B
PHKB
ITFG1
TPM2
NUP85
FKTN
RGPD2
RGPD1
PRMT5
NDUFS5
TMEM161A
CNOT11
CDK8
TEX46
KDM1A
ZBTB3
OSGIN1
ADGRA2
TRIOBP
NUDT2
KIF24
UBOX5
FASTKD5
ATF6
SPHK2
RPL18
FAM83E
TAF1C
ADAD2
ZNF131
FRG2
TCIRG1
RCN1
GHITM
SPATC1
TFB1M
TLN1
CREB3
ANGPT1
LTO1
RUNX3
ADGRG1
TDRD7
LSM14B
CRLS1
SIRT5
DRAM2
CEPT1
SLC25A25
NAIF1
MRFAP1
CBX4
CLUAP1
C16orf90
PDCL
NELFCD
ST6GALNAC4
SLC35A4
APBB3
ELP3
LMO7
GGCX
UBE4A
ATP13A3
PKD1L2
GABARAPL1
PAXBP1
PRR30
PREB
TERF2
PLEKHG2
RPL6
CCDC200
CABLES2
SLC25A44
STAT3
LIMK1
ERCC6L2
EIF5A
GTPBP6
CCNT1
SYNJ2
GSTA4
TMCO6
CD14
EIF3C
RIOX1
TRIP4
RPL13
SRPK1
SEMA4B
ADPRHL1
SH2B1
GLIPR1L2
VPS13B
KCTD18
TBC1D16
TIA1
PCBD2
SYMPK
FOXA3
CCNC
HPS1
GPCPD1
PITPNA
PSCA
DENR
ARNT
ADA
SYT7
GRSF1
CIAO3
NOL11
CETP
CWF19L2
IL11RA
DAGLB
PPP6C
KCTD2
ATP5PD
C9orf131
RPP25L
SLC26A8
MAPK14
ZC3H15
SNU13
MRPL44
METRN
RPTN
RAB5C
FOXK2
PDCL3
NCOA5
ARSD
LARP1
FAF1
TPK1
PGLS
CDYL
PREX1
CLK3
DIO1
LAPTM5
PANK3
STXBP3
TRMT2A
RANBP1
TRMT1
NACC1
LFNG
MRPL38
LDLRAP1
NUF2
ABT1
HIBCH
GTF2H5
RBM4B
UQCR11
CACTIN
PDE4A
GABPB2
AP2S1
COX7A2
SLC38A10
PAK4
C17orf64
TOM1L2
DRC3
MRPL39
BRAP
ACAD10
RPL36
METTL14
CNN1
SLC35B1
MRPL54
APBA3
SSBP1
PPP1R13L
POLR1G
SLC27A1
FAM200B
LY96
AP3B1
DOT1L
COMMD2
MAP3K10
COL23A1
ARHGAP39
KIAA0895
ANLN
SARS2
MRPS12
GPSM2
PNPLA6
RAD52
CIC
PIP5KL1
TNS4
DAAM1
NDUFS7
ICAM1
ZBTB45
ZNF184
HEXB
DSTYK
SGSM1
SLC30A6
ELFN2
GNE
EMC4
POFUT1
PLAGL2
GALT
POLG2
TMCC1
PCCB
ANGPTL6
FBXO27
CACUL1
DDX18
ICMT
ECSIT
GSN
RAB14
DPY19L4
C16orf70
LEO1
TRIB1
ISOC2
MRPL48
LYPLA2
PEX3
ADAT2
DUSP1
SWSAP1
SMNDC1
SMG8
ZZEF1
CYB5D2
TBPL1
NCBP3
CHST12
MFSD4B
ACOT9
FANCG
FASN
MARCHF7
PPP6R1
MVB12A
H6PD
MORC3
ILF2
DPP3
CEP164
AKNA
OSTF1
NMRK1
TGM3
ZNF70
VPREB3
CASTOR1
TRIM26
E2F6
NDUFAB1
TOR1AIP2
MPRIP
TOR1AIP1
CRTAP
FAM98B
CHMP6
LZTS3
ATG16L1
FAM168B
COMMD6
UCHL3
ATP6V1E1
TRAPPC3
CTR9
NLRP1
PSMD14
DUX4
VPS37C
FBXO46
RS1
PPEF1
UPP1
PRXL2C
SLC44A1
MED18
LTBR
SRXN1
USP45
TPP2
TSTD3
PFAS
DYNC2I1
DCAF7
IER5
PTPN4
MAGI3
TIMM9
KIAA0586
TIGD1
EIF4E2
GADD45B
TIPARP
WNT7B
DMAP1
SMARCC2
REXO4
ADAMTS13
ERICH4
DMAC2
SMIM8
HIVEP1
OSBPL5
RFX1
TSACC
CCT3
MANBAL
ATP6V0E1
WDR70
C20orf27
PARG
SEC14L1
KIF2C
SYT11
GON4L
LOC112267881
FRA10AC1
NUCKS1
SBK3
RAB2A
PCBP2
STX16
TCF3
ARMC7
SLC25A20
SHFL
TSEN54
CASKIN2
CCDC117
POU2F2
NFIC
ARRDC1
USP35
KCTD21
WASF2
EGR1
ASXL1
EMC8
COX4I1
TTC4
RHOD
GRK6
TGFB1I1
MCM7
AP4M1
MT1F
MT1B
ZNF77
RAB11B
TAC4
VKORC1
RPS7
ARFGEF2
MTF2
ARTN
DNAJC11
DARS1
KIAA2013
HIPK3
FGF14
MEX3C
ABRAXAS2
NIBAN2
ALG10B
RACK1
MRPL12
ZNF554
CALHM5
TCTN3
SCAMP4
ADAT3
TRIM55
GFPT2
PLEKHA7
KIF16B
KDSR
ARHGEF16
TOX2
FAM220A
NKIRAS2
DNAJC7
DUS1L
CCDC22
CACNA1F
ASF1B
SH3PXD2B
RECK
ELMOD2
UBE3B
BIRC7
HPS6
KANSL3
FER1L5
RAB4B
MIA
IFNGR2
TIMM22
PHACTR4
TIMM23
SP1
PFDN2
NIT1
TAF5
UNKL
PRDM8
GADD45GIP1
SPOCD1
ZNF606
EEF1AKMT1
TMEM242
FPR1
MFAP4
BNIP1
YIF1B
KCNK6
BRIX1
POLR2D
PIBF1
DIS3
DHX15
CLMP
ARPC3
RPS12
VARS1
INTS12
GSTCD
PRRG2
NOSIP
BAHCC1
RNF114
CIBAR2
SF3A3
ZNF256
CORO1C
CERCAM
CDA
CLCF1
RPL37
ZNF408
ARHGAP1
RPL24
SIRT4
LSM5
AVL9
TK1
BCL9L
PTPN3
UNC13D
MRPL35
IMMT
UBE2D2
MYOM3
TRABD
PDLIM7
BANP
PISD
TYW1
SBDS
BEGAIN
NUMA1
LRTOMT
EHD2
ZNF526
DEDD2
DCDC2
TP53I11
KAAG1
XPO5
POLH
ANAPC11
COQ3
GRHL3
H2BU1
H2AW
ZFAND5
KRT79
RABGEF1
CYLD
CLPP
OPA3
RIN3
EIF5A2
TPM4
TGDS
IKBKE
ZNF687
UTP3
SEC13
PLEKHM3
YTHDF2
THEMIS2
NDUFS3
KBTBD4
ADAM19
PDE8A
SUGCT
MPLKIP
UBXN4
PPP2R2A
CDK5RAP1
GORASP2
DAG1
MPC2
DCAF6
TRERF1
ZNF572
POLR1H
WDR11
TAS1R1
NOL9
RPS6
IQCE
BRAT1
SNUPN
H2BC12
H2AC12
CTSZ
CDC5L
OPA1
SHROOM2
RPS20
TNFRSF18
GPR160
ZSCAN25
NCOA7
S1PR4
HUS1
PRUNE1
MINDY1
RBM12B
TRIM59
PRDX1
MMP17
H3C8
H2BC10
ZSWIM3
ACOT8
FLVCR1
RBM7
C11orf71
ASMTL
FEM1A
GASK1B
DPY19L1
TCERG1
ZRANB2
WDR7
SNX12
ZNF281
SPRY1
ZFP36L1
GALNT10
SPTBN4
ARHGAP24
CCDC43
ABCC3
MKNK2
LUC7L2
FMC1-LUC7L2
FMC1
NDE1
MARF1
LACTBL1
VPS35L
MAP2K6
STAT6
TMCO4
SPATC1L
INO80C
COX5A
POLR1F
FUCA2
ACOT7
EIF3D
PTK6
ARL14EP
MTERF1
C6orf226
RPL37A
AMOTL1
CCDC42
CDK11A
TEAD1
VTA1
NMBR
FABP6
CLIP2
PSMD9
HPD
ERCC1
IRGC
H4C6
PRKCA
LITAF
ZNF385B
ANK1
NEK6
TTC38
PKDREJ
ARHGEF11
TMC1
SCML1
ZER1
GTF2IRD2B
ZBED9
KDM4B
OMA1
DAB1
DNAI1
FAM219A
HSD17B11
ZNF330
AP2A2
DIDO1
TADA1
AGPS
SYNGR2
COL18A1
MITD1
MRPL1
ENSA
RBBP5
SNRPC
CKM
PPAN-P2RY11
PPAN
SSBP2
CDAN1
CDC42BPG
MCIDAS
SRP19
CZIB
EML2
H1-3
KIFBP
NEDD1
NPR2
TTI2
ABCA1
TCEA2
KLHL12
IPO13
SNTB2
UBAP1
USP43
TIMP1
SLC27A4
DEF8
USP42
MOSPD3
DSN1
PABPN1
ATP5IF1
PSMC3
DENND6A
GOT2
TUBE1
FAM229B
SLC16A8
TUFM
SDAD1
TMEM184A
HSPA6
ZNF579
COX20
TRIB3
ROBO3
CARD14
ZCCHC3
IP6K3
TNFRSF6B
CIZ1
H4C8
TBC1D19
CEP78
WDR75
PDE4DIP
COPS4
ACTL6A
CDK9
MRI1
WBP2
EIF3L
ANKRD54
NAT10
ODC1
EID2B
ADNP
NICN1
MTHFSD
SLC7A4
LRRCC1
TACO1
IL1RAP
SH2D5
MYCBP2
FIBCD1
SAR1A
UBA52
UBE2R2
TACC2
NXPH3
ST6GALNAC6
IFT46
CCDC97
CCDC153
PMM1
FOSL2
GNA13
LPIN3
CFDP1
THAP9
SEC31A
CHRNA9
RAN
ETFDH
C4orf46
PRKAR1B
PRELID3A
RAB5B
TPRA1
SIGMAR1
MCM2
TRAM1
ZHX1-C8orf76
ZHX1
CRK
ZNF234
HMGN4
RBM45
PDE11A
RAG2
IFTAP
RHNO1
FOXM1
LDLRAD1
VPS53
RIC8A
BET1L
MICALL2
HMGB1
HEATR6
RPN1
USPL1
VPS16
PCED1A
PPP4R3B
ZSCAN26
KLHL29
PTOV1
IRF2BP1
PLXDC1
RPL38
PCYT2
DENND3
KLHL5
HHAT
PRELID2
CTDSP1
ZNF713
AMZ2
WIPI2
NIPA2
DYNLRB1
C4orf48
RNASE4
ANG
NSFL1C
CTPS1
ZNF628
VSTM2L
TMA16
MICALL1
MTMR14
FAIM
BNIP5
RBM12
CPNE1
APC2
FAM156B
FAM156A
SRP68
LGR6
MEGF8
DOLPP1
POLR3E
MUC1
ZBTB5
PNISR
CDIN1
KANSL1
TMEM168
LOC102723360
VCP
ELAVL1
EP400
EIF4A2
TMEM89
HERC5
PCNA
NDUFAF4
KLHL32
TMTC3
CEP290
TES
GBA
TRAF6
RAG1
MTBP
MRPL13
LY6G6F-LY6G6D
LY6G6F
ABHD16A
RIPOR3
NBN
MRPL3
YAF2
RTN4RL2
QKI