ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741422 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX16386912: 293

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX15039987: MDA-MB-231

◢ SRX15039988: MDA-MB-231

◢ SRX15039990: MDA-MB-231

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◣ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX15039983: T-47D

◢ SRX15039985: T-47D

◢ SRX15039986: T-47D

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

SPAAR
CCIN
MTRNR2L2
MSH3
DHFR
SPAG8
HINT2
MTRNR2L8
CDK12
STOML2
PIGO
TBC1D4
CCDC107
MED23
UBE2F
PSMB6
PEX3
ADAT2
VPS37D
PTPRF
RASA2
MTRNR2L1
ARHGEF1
ZBTB40
LPIN1
CLTA
RPS7
TRIP4
RGPD2
RGPD1
HRCT1
RNF216
INTS12
GSTCD
TRMT10A
MTTP
DMAP1
ATP5MC3
TESK1
MRFAP1L1
UTP25
TEX46
KDM1A
RPL27
H4C3
H1-6
ZDHHC5
COMMD2
AKIRIN2
UBE2L3
POLR1H
PAXX
CLIC3
AURKAIP1
RUSC2
GTF3C3
TOMM7
AHCY
RMND1
ARMT1
NFE2L2
NLRX1
TLN1
CREB3
SIT1
SIRT5
AP2A2
LRRC37A3
ARL14EP
SSBP1
TOP3B
ZKSCAN8
CLPB
GNE
SLC35E2A
DNAJC19
ZCCHC4
PDCL
PHKB
ITFG1
PSMF1
TSSC4
TRIM55
MSMP
CYRIB
IL11RA
ELP3
CD36
UBE2V2
GTF2H4
DNAJC25-GNG10
DNAJC25
OSGIN1
RPP25L
FAF1
TRAPPC9
SNRPB2
ZFAND1
ARHGEF39
CIZ1
COX7A2
OSCAR
NDUFA3
MT1M
MT1E
NCOA5
ATR
NDUFS7
TENT2
EIF3E
ZNF335
EPRS1
RBBP5
MRFAP1
C9orf131
MRPS14
MRPL45
RNF24
DPY19L4
ZSCAN9
UBFD1
EARS2
NR6A1
KIF3B
TBC1D19
CRYAA2
CRYAA
WDR74
WDR43
SPHK2
RPL18
FAM83E
CABLES2
DYM
GTPBP6
GBA
GPCPD1
SMG5
TMEM79
NPR2
RGP1
GBA2
GTF2H2
GTF2H2C
SLC39A11
ENGASE
MRPL58
ERCC6L2
RXRA
SLC35B1
LFNG
PANK3
PRDX1
PPP5D1
CALM3
CTNNBL1
MTERF1
AP1G1
TEF
ZER1
CRLS1
PRMT1
AARS2
STX16
TACO1
INKA2
DSTYK
DDX20
FRG2
FBXW5
C8G
RPS14
FANCG
SF3A3
FAM8A1
PLEKHM3
ZMAT2
HIBCH
PAXBP1
RAC1
MELK
TRIOBP
REXO4
ADAMTS13
PGS1
MTF2
VCP
EIF4A2
HEATR3
YWHAG
DPH5
AMZ2
CASC3
PRPSAP1
RAD52
EIF1AD
BANF1
MYCBP2
TMEM242
AP3S2
COMMD6
NFX1
COL23A1
CDK5RAP1
LOC730098
CCL27
NUDT2
KIF24
UNC13B
EDC4
RRAD
TPM2
CDC25B
RPL38
CETP
DNM2
DRG2
DDX18
RIN2
NOTCH2
SNAP47
JMJD4
ZMPSTE24
SLC28A3
UIMC1
CCNC
ADNP
EIF3D
RRP15
FBXW2
MRPL39
MRPL35
IMMT
NDUFC2-KCTD14
NDUFC2
RGS20
TFB1M
EIF3F
MEX3C
MRPL38
POLG2
RECK
CCDC88A
JAG1
PIH1D1
ALDH16A1
PPIL3
NIF3L1
ZDHHC24
ACTN3
ZNF638
MVB12A
FOXK2
ZKSCAN2
NDUFAF4
KLHL32
ZNF165
MITD1
ZBTB3
ASXL1
MRPL12
TMEM222
SMARCD2
EED
YTHDF2
HIF1AN
SMU1
STAT3
MRPL44
RPL37
ADCY4
ZSCAN16
PLEKHG2
ATF2
NOL11
MRPL3
NOTCH2NLC
SP2
PDCL3
FKTN
KCTD2
ATP5PD
PAFAH2
PDCD6
RFC5
DUX4
ZNHIT6
WDR70
NMNAT1
LZIC
GORASP2
TIMM9
KIAA0586
PCCA
ZNF8
NUTM1
NOP10
MRPL15
FXN
UBE4A
NUDT9
MDM4
RNFT1
PRLR
POLR2M
P3H4
FKBP10
RSPH6A
PSCA
H4C11
SH2B1
SMCO4
LUC7L2
DOT1L
PRELID2
UCHL3
SNRPE
TXNDC11
TANK
CARD14
ZNF461
PERM1
MSL2
CRH
C8orf37
LMAN2
COPS7A
PRICKLE3
DCP1A
ADM
RPL10A
ELFN2
VPS25
RBIS
LRRC59
FAM227B
DTWD1
FRG2C
KXD1
CCDC200
ZDHHC12
RFX1
C1QTNF8
NUCKS1
CACTIN
SGSM1
MLLT1
SOGA1
CNOT3
COASY
TOR1A
C19orf25
ATG16L1
SLC29A3
SPATA2
FBXO43
TRMT1
NACC1
METTL14
SORBS1
EIF3C
TKT
ADRM1
TERF2
HLA-E
SRRD
HPS4
EIF3CL
PLIN3
PRMT5
TJP3
SETD1A
ARNT
SNX16
GADD45B
PSMD9
HPD
ZFP36L1
EPS15
PAK4
CEP164
KIF16B
SLC39A10
ZCCHC14
SRXN1
ISOC2
SWSAP1
DDX17
AP3B1
UEVLD
PDE4A
BORCS7
TIPARP
LTO1
CLK3
LGR6
HPS1
SLC25A16
PIGBOS1
PIGB
SLC30A6
BRAP
ACAD10
PDLIM7
ZNF77
SPAG4
UBOX5
FASTKD5
PPP6R1
CPPED1
HNRNPA2B1
CBX3
MEGF8
ZNF131
CHST12
CCNT1
TAF1C
ADAD2
SYNJ2
ALDH3B1
PRR5L
COMMD9
ADGRG1
CNN1
HPS6
AKNA
DIO1
MKNK2
ADGRL1
SRPK1
ATF6
GTF2H5
RABGGTA
CCDC22
CACNA1F
SMG8
SRCIN1
SPATC1L
CAVIN1
GLIS2
RIOX1
USP35
KCTD21
TIA1
F2
SIRT4
TCTN3
RPL6
KDSR
COPS4
MAMDC2
KIF2C
NEURL4
DCDC2
SLC25A25
NAIF1
GSN
LSM14B
ILF2
CASTOR1
RAB2A
OLFML2A
MEF2D
NPAS4
DYNC2I1
RAPGEF1
TRIM26
KRT15
ZNF184
FBXL19
UBXN4
RAB5C
MEGF9
SLC25A20
PMEPA1
RBM4B
RHOD
GSTA4
RPS29
IRF2BP1
EFR3A
KANSL3
FER1L5
CLUAP1
C16orf90
SERPINB1
STX6
GALNT10
TCIRG1
CSF3R
SCAMP4
ADAT3
NAE1
ARHGAP39
ATP5MC1
CLPP
UNC93B1
MRPL54
APBA3
TDRD7
ETFB
FMC1-LUC7L2
FMC1
CHMP6
TGM2
ENSA
PITPNA
GPR137
FKBPL
ATF6B
PPP1R13L
POLR1G
NEK6
LDLRAP1
DAGLB
GADD45GIP1
TFAM
DLAT
SCML1
SNU13
GPR160
RAB11B
MLX
ARPC3
DTD1
PRR30
PREB
SLC35A4
APBB3
PTPRA
TP53I11
SREBF2
NUP85
PRRT3
ATG4C
RAB14
LARP1
PSMD4
ERCC1
LSP1
RPS6
TMC6
WASF2
TP53RK
SLC13A3
KDM3B
TMEM161A
ICMT
MATR3
NELFCD
MICALL2
DIDO1
MCC
ZNF234
ALDH18A1
RABGEF1
ATP6V0E2
ZNF687
BAD
ICAM1
TTC38
EMC4
TCF3
ZNF555
ST6GALNAC6
RNF114
RPS12
SYT7
CYLD
KANK2
SLC27A4
LSM5
AVL9
POFUT1
PLAGL2
CTR9
XKR8
RPL36
KAAG1
TUFM
GNG7
PKDREJ
KTN1
UBE2Q1
STK10
PARP2
SLC38A10
PRR5-ARHGAP8
PRR5
GRSF1
SYT11
GON4L
TK1
ZFAND4
ZNF609
AKT2
TMEM107
MDGA1
GPSM2
SEMA4B
HOOK1
SHFL
AARSD1
VPS37C
ZNF500
HCAR3
CDON
SYMPK
GRPEL2
FOXA3
NICN1
KIFC3
RGL2
TMEM214
SREBF1
NEDD1
MFSD4B
EIF5A
HMGN4
RPL37A
H6PD
PCCB
TSC1
GFI1B
MTHFSD
NCAM2
NUF2
STX10
IER2
PTPN1
RAB4B
PTK2B
MIA
HAS1
RBM5
TAC4
SLC26A8
MAPK14
PDSS2
NEMF
DEF8
PHF23
GABARAP
PPP2R2A
DPP9
OR2T1
ZSCAN25
PDLIM1
VKORC1
SPOCD1
KLF1
GCDH
POLR2J3
NUDT3
TNS4
CTDSP1
RIF1
TSACC
NCOA6
CCT3
MTMR14
GEMIN6
MANBAL
HUS1
TRAF6
RAG1
IFNGR2
TRAPPC6B
PNN
IER3
FLOT1
SNRPC
KIAA0895
GPR84
ANLN
RCC1
FBXO46
SEPTIN9
YEATS2
PLXDC1
RASA4
IQCE
BRAT1
ZNF606
RNF213
ABRAXAS2
PLD1
WNT7B
CYB5B
DHX16
ACOT9
CORO1C
EGR1
INO80C
YPEL3
TTYH3
TBX6
DAAM1
DPP3
WDR59
HM13
HES7
ALOXE3
ERICH4
DMAC2
HAX1
SLC25A44
SARS2
MRPS12
LZTS3
PRUNE1
MINDY1
TIGD1
EIF4E2
SEPTIN7
E2F6
ZZEF1
CYB5D2
USP45
CKM
CNOT11
BDH1
SPC24
LIME1
CDKN1A
RTKN
PPP6C
COX5A
USP42
TMEM41A
STRBP
B4GAT1
SUOX
GRK6
SH3GLB2
POLDIP3
EEF1AKMT1
ARID1A
RNF187
SLC27A1
TADA1
RAB8A
FCMR
PITPNM1
SEC14L1
MTRNR2L9
LOXL4
ZBTB43
SLC25A39
ACTL6A
RBM12B
MARS1
ARHGAP9
C1orf198
ADAM19
CIBAR2
ATP13A3
EPC2
PPP1R9B
BCL9L
LRP5L
HEXB
MTOR
RASA4B
ADPRHL1
ATG9B
ABCB8
STARD13
BANP
ZNF713
PGPEP1
FAIM
MELTF
ZBTB7B
MNT
NDUFAB1
LAPTM5
FAM161B
COQ6
EXD1
CHP1
FBXL18
ZNF764
LIMK1
TMEM51
CDT1
GABARAPL1
CBX4
ELAVL3
SCGB1C1
PCGF2
VCL
AMOTL1
TBC1D16
FUT10
SLX4IP
MKKS
METRN
TTI2
FBXO11
ADAMTSL5
CLTB
TRIM32
ASTN2
ASMTL
MOSPD3
PHF19
CENPN
SMN2
SMN1
CERCAM
ASF1B
ZNF443
MYNN
ACTRT3
RAB5B
TOP1
ZBTB45
TSNARE1
STARD3NL
NEK10
TMC8
NCOA7
AP2S1
UTP3
GAMT
PMM1
FABP1
LMO7
CAMK1
ARHGEF11
GGCX
BCAS1
S1PR4
ATP6V0E1
WIPI2
TMCO3
DCUN1D2
HIBADH
PNPLA6
TIMM10
PHC2
IL12RB1
DSN1
SDAD1
TIMM22
CBX1
RS1
PPEF1
GLIPR1L2
FASN
EIF2D
PFN1
EHF
SLURP1
NOM1
TBRG4
COX16
PHLDA2
LRP5
TPK1
RPTN
NDE1
MARF1
OPA3
DHX15
SLC44A1
ZNF771
POLG
TIMM17A
PGLS
SCFD1
LMTK3
VPS13B
C16orf70
SHISAL2A
TPP2
SH3PXD2B
CDK8
WWOX
TM9SF4
PPP1R9A
FAM168B
SNUPN
EBI3
BAIAP2
ARFGEF2
UROS
BCCIP
TMPRSS9
SCGB1C2
MBD4
IFT122
CWF19L2
SNX15
PKD2L2
MTBP
MRPL13
RIN3
ZNF799
PSMD3
MRPS23
BRMS1
SNX8
SLC12A4
ECSIT
DOLPP1
TMEM184A
NUDCD3
HOMEZ
INF2
STK4
OGFOD1
NUDT21
CYP2R1
EIF5A2
H4C8
PISD
TADA3
ARPC4-TTLL3
ARPC4
VARS1
NIPA1
PTEN
KLLN
LY6G6F-LY6G6D
LY6G6F
ABHD16A
ZNF195
RPL35A
POLR3E
IQCG
ZNF343
ASGR1
ZNF572
PDE6B
CDK9
RCN1
FEM1A
SLC31A1
H2BC12
H2AC12
FOSL2
FKBP15
MED18
EFNA4
IFNAR1
CDK11B
TGFB1I1
NIBAN2
BORCS6
GABPB2
EAPP
ABCA1
VAT1
RND2
KATNIP
GTF3C1
DENR
MOK
PTPN3
DGAT2
RUNX3
CDA
SRC
PKN3
BNIP5
IL1RAP
ID1
DCT
ABHD3
STXBP3
RTBDN
INTS5
MRI1
INTS10
BBC3
SEC13
SLC13A5
PYY
NAGS
MRPS17
ANXA2
RBM25
COQ7
PCBD2
ALG10B
USP36
MACC1
UQCC1
NOL10
NIPA2
KDM6B
SERPINA1
MAST3
SLC29A2
AHSG
MEMO1
NUDT8
NSMCE1