ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741419 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◣ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

MTRNR2L8
SPAAR
CCIN
GTF2H4
TRMT10A
MTTP
VPS37D
PSMB6
ZNF335
CCDC107
PTPRF
ZMAT2
CYRIB
TBC1D4
LPIN1
MRPL45
RASA2
NEURL4
RXRA
FBXO43
CAVIN1
SLC39A11
NUDT9
MTRNR2L1
MTRNR2L2
MSH3
DHFR
HEATR3
ENGASE
HLA-E
SLC35E2A
BORCS7
RNF216
YWHAG
SMU1
CTNNBL1
PRMT1
ADRM1
TEF
NLRX1
PIH1D1
ALDH16A1
UBFD1
EARS2
ZDHHC12
AHCY
RGPD2
RGPD1
RNF24
NCOA5
COL23A1
MRFAP1L1
KXD1
OSCAR
NDUFA3
SP2
MED23
TESK1
SLC31A1
FKBP15
MELK
UBE2V2
WDR43
WDR59
KRT15
SLC29A3
CRYAA
CRYAA2
TOR1A
PAXX
CLIC3
HAS1
KCTD2
ATP5PD
CLTA
TOMM7
NR6A1
OLFML2A
XKR8
C19orf25
CNOT11
CIAO3
STOML2
PIGO
SMCO4
MCC
MT1M
MT1E
MAMDC2
GTPBP6
STK10
CHMP6
CDK12
FBXW5
C8G
TCTN3
CLPB
TLN1
CREB3
DPH5
DAAM1
PRR5L
COMMD9
GRSF1
PRR30
PREB
SCFD1
HCAR3
PLIN3
MEF2D
DYM
PHKB
ITFG1
MRFAP1
MATR3
LTO1
TMCO6
CD14
LTBR
RPS14
ZCCHC14
RIN2
FXN
UBOX5
FASTKD5
PLD1
CWF19L2
CCDC200
PRMT5
LSP1
CABLES2
PMEPA1
TMEM51
AARS2
SRRD
HPS4
SGSM1
UTP25
ELP3
DPEP1
PAXBP1
KDM3B
ICMT
IFNGR2
UBE2L3
TRMT1
NACC1
TIA1
EPRS1
DRG2
CACTIN
NUP85
ARNT
ZNF131
CHRNA9
AP2S1
EED
DLAT
ZDHHC24
ACTN3
MSMP
ZCCHC4
PRPSAP1
NPR2
TACO1
EMC8
COX4I1
SMARCD2
PTPN1
ANKRD46
CDYL
ADGRG1
SYMPK
FOXA3
HRCT1
RAB5B
MLLT1
TKT
RFX1
CLPP
TDRD7
SOGA1
EPS15
SLC25A20
SPAG8
HINT2
DMAP1
LOC112267881
NCR1
TENT2
SLC26A8
MAPK14
MTBP
MRPL13
OSGIN1
DNAJC19
ALDH3B1
UNC93B1
SERPINB1
GHITM
UIMC1
TAF1C
ADAD2
ASMTL
RPTN
RPL6
ARHGEF39
MTOR
SLC25A16
NUDT2
KIF24
LSM14B
CRLS1
GGCX
ST6GALNAC4
ZNHIT6
UTP3
SYNJ2
PSMD4
SLC38A10
MT1F
MT1B
SIT1
PITPNM1
PDE4A
ARHGEF1
GABARAPL1
ARHGAP39
FANCG
RCN1
SIRT5
UBXN4
SLC35A4
APBB3
CLK3
AKIRIN2
RBM4B
ZFAND1
RIF1
CIZ1
PARG
CXADR
GPCPD1
DOT1L
VPS13B
COASY
RFX7
TEX9
TRABD
LOC730098
CCL27
PKD1L2
CDC25B
STX16
LIMK1
CETP
SSBP1
SLC25A25
NAIF1
TBC1D16
KCTD18
ERICH4
DMAC2
KLF5
C6orf226
TTC38
PKDREJ
RAC1
LSM5
AVL9
COX16
METTL14
WDR74
PEX3
ADAT2
SYT11
GON4L
ZBED9
LMTK3
CLCF1
DUX4
CNN1
ATP13A3
TIPIN
NUCKS1
MKNK2
RUSC2
SF3A3
RPL36
GSN
FKTN
RAB14
SARS2
MRPS12
PPP6C
IER3
FLOT1
IL1RAP
TRIOBP
CLUAP1
C16orf90
ARTN
PPIL3
NIF3L1
DPY19L4
ENSA
DPP3
PKD2L2
ZNF638
SRXN1
TCF3
TRIP4
SEC14L1
ELK3
HUS1
CDK8
CDAN1
FAM200B
RAD52
CEP164
FOXK2
GORASP2
BCAR1
PFDN2
NIT1
SMG8
SEPTIN9
SEC13
CFDP1
MTHFD1L
ST6GALNAC6
CKM
NDUFS7
PDCL3
EEF1AKMT1
ADAMTSL5
RBM45
PDE11A
IER5
PRSS16
PDSS2
MDFIC
PAK4
LAPTM5
FRG2
GNE
FASN
TNS4
RBM12
CPNE1
CDK5RAP1
SNU13
WDR70
EIF3C
TGM2
GSTA4
NEDD1
EGR1
TBRG4
SPATA2
ATG16L1
AKNA
ZNF184
ADNP
SCAMP4
ADAT3
GLIPR1L2
MMS22L
SLC30A6
ZNF764
PMM1
TJP3
PSCA
ARFGEF2
DAGLB
LARP1
METRN
DGKZ
ELOVL6
ATG4C
PCCB
TSACC
CCT3
USP45
TSTD3
GADD45B
MRPL38
COX5A
TGDS
UBE4A
AP3B1
LFNG
AARSD1
TRAPPC3
TRIM45
RPS6
FAF1
ADGRA2
EIF2D
CHST15
AHSG
ST3GAL4
POU2F2
COL18A1
DAB2
SIRT4
ZC3H15
MVB12A
MEGF9
CCNC
GPSM2
PLXDC1
POLG2
NELFCD
PCGF2
PHC2
RPL37A
COX7A2
ZSCAN9
RPL10A
GRAMD2B
PPP1R13L
POLR1G
RAB5C
SHFL
TMEM214
CDKN1A
PLEKHG4
HAX1
SLC44A1
CHERP
FAM8A1
IL31RA
NEMF
GTF2H5
PGLS
TPK1
SLC7A2
INO80C
TRAPPC9
FPR1
HNRNPD
THEMIS2
SYNGR2
TIMM23
VKORC1
SPHK2
RPL18
FAM83E
PITPNA
NICN1
TPM2
SLC27A1
RPP25L
KLHL20
ODF3L2
WDR7
IP6K3
SELENOH
MADCAM1
MEST
CDA
EIF5A2
MARS1
ARHGAP9
NLRP1
ATF6
CASTOR1
ACOT9
KIF16B
EMC4
RAB2A
SUN1
ELFN2
RAN
FGFRL1
EIF3CL
CCNT1
HPS6
ERCC1
ADPRHL1
GEMIN6
MT2A
BRAP
ACAD10
NBN
MLXIPL
HPS1
HIBADH
TIMM22
ZBTB5
C9orf131
TMEM184A
MPRIP
KRBA2
WIPI2
MAD1L1
DIPK1B
DYNC2I1
PLEKHG2
PTK2B
MTF2
NIPA2
LPAR2
RIC8A
BET1L
ZZEF1
CYB5D2
COMMD6
FAIM
ZNF789
SETD1A
NDUFS5
CDC5L
RIPOR3
NKIRAS2
DNAJC7
CASC3
RBBP5
HMGN4
DCAF7
RBM12B
C1QTNF1
NOP53
TNFRSF6B
ZNRF1
MANBAL
MACC1
TGM3
PLEKHM2
CEBPD
IL11RA
CCDC42
IRGC
MAP3K10
CRH
MRPS33
ECSIT
DHX16
FAM156B
FAM156A
SLC35B1
ISOC2
ZER1
SRI
SLIT3
ZBTB3
ZNF234
RPAP1
BRIX1
ETFB
OMA1
DAB1
PMAIP1
LIMS1
ZNF93
ICAM1
NDUFAB1
FBXO46
IGSF10
CPT1A
DIO1
PTPN3
ATXN7L2
DOLPP1
GNA13
BCL9
KCTD3
CP
LMO7
H4C6
RPL38
UBE2Q1
COPS4
AP3M2
RABGEF1
PFAS
DEF8
SLC27A4
ARHGAP24
FRG2C
C1QTNF8
GBA
CNOT3
TFB1M
LGR6
TERF2
SNX16
RABGGTA
PSMD9
PDLIM7
HPD
CPPED1
MEGF8
SPAG4
SH2B1
F2
LUC7L2
SORBS1
IRF2BP1
PDCL
SWSAP1
PIGBOS1
PIGB
FBXL19
FMC1-LUC7L2
FMC1
CCDC22
CACNA1F
KIF2C
NPAS4
AP2A2
TRIM26
USP35
KCTD21
MLX
GLIS2
SREBF2
CHST12
SRPK1
MRPL35
IMMT
DIDO1
ZNF687
NAE1
FKBPL
ATF6B
ZNF77
MRPL39
MRPL54
APBA3
SCML1
ZFP36L1
PTPRA
TMEM161A
TIMM9
KIAA0586
AKT2
RHOD
SPATC1L
SRCIN1
WASF2
LDLRAP1
RAB11B
KDSR
KIFC3
CYLD
TUFM
PRELID2
TCIRG1
ATP6V0E2
GALNT10
RPL27
TAC4
PPP5D1
CALM3
ILF2
NEK6
OR2T1
SEMA4B
TP53RK
SLC13A3
VPS37C
KLF1
GCDH
NUF2
CSF3R
EIF5A
ATP5MC1
GADD45GIP1
DNM2
CTR9
RASA4
ZNF606
TSC1
GFI1B
ZBTB40
CTDSP1
POFUT1
PLAGL2
RPS12
YPEL3
TBX6
RBM5
RAB4B
MIA
MFSD4B
TIGD1
EIF4E2
EFR3A
RIOX1
UEVLD
ZSCAN25
LIME1
MEX3C
CYB5B
GRPEL2
RAPGEF1
RNF213
TK1
GPR160
MTRNR2L9
WNT7B
MICALL2
LOXL4
H6PD
RPS29
ZNF500
RNF114
COMMD2
TEX46
KDM1A
HIBCH
STAT3
LRP5L
PRUNE1
MINDY1
RASA4B
SREBF1
KANSL3
FER1L5
STARD13
GTF3C3
TMEM242
PRR5-ARHGAP8
PRR5
TIPARP
UBE2F
PPP2R2A
MRPL44
HES7
ALOXE3
SNRPC
GPR84
TFAM
PPP6R1
KANK2
RNF187
ASF1B
ZBTB45
TSNARE1
NEK10
USP42
DCDC2
GAMT
MTMR14
IQCE
FABP1
BRAT1
CIBAR2
CAMK1
RCC1
ABRAXAS2
BCAS1
ZFAND4
S1PR4
RPS7
TIMM10
GNG7
KTN1
ADAM19
SLURP1
ZNF555
ATP5MC3
OPA3
DHX15
HM13
DDX18
ZNF771
PDLIM1
C8orf37
C16orf70
PSMF1
TPP2
TM9SF4
PPP1R9A
FAM168B
ZNF443
SCGB1C2
RTKN
MBD4
IFT122
AURKAIP1
NCOA6
PSMD3
MRPS23
NUDCD3
SYT7
STX10
IER2
OGFOD1
NUDT21
RMND1
ARMT1
TRIM55
SMG5
ATR
ZNF195
PDE6B
CDK9
TADA1
HEXB
FOSL2
TMEM79
EFNA4
TGFB1I1
KATNIP
GTF3C1
BCL9L
SLC25A44
DGAT2
MOSPD3
RUNX3
SLC25A39
TMC8
TMC6
SH3GLB2
DCT
MRI1
BBC3
DSN1
PNPLA6
TRIM32
SLC13A5
IL12RB1
H4C3
H1-6
ASTN2
PYY
NAGS
ANXA2
ALG10B
USP36
EIF3E
TRAPPC6B
PNN
SPC24
UQCC1
MRPS14
SERPINA1
MEMO1
SLC35E2B
RAB8A
TANK
CLU
RGP1
GBA2
TBC1D19
MAD2L1BP
ZNF799
RIN3
EIF1AD
BANF1
ASGR1
DUSP1
CENPN
ARPC3
ZNF572
SEC14L4
GALT
LRP5
ASXL1
ARHGAP35
ANGPTL6
EIF3D
SHISAL2A
INTS12
GSTCD
RPL22
GRK1
TSEN54
DSTYK
CASKIN2
POLR2J3
PPP1R9B
ARHGEF11
SLC12A4
IFNAR1
FCMR
NCOA7
ZBTB43
SPOCD1
NUDT18
TCEA2
LACTBL1
KDM3A
ANKRD13C
TADA3
LZTS3
ARPC4-TTLL3
ARPC4
TFPT
PRPF31
NRL
MED18
DCAF11
RPL37
UPP1
NME1-NME2
NME1
PLEKHM3
EBI3
KIAA0895
ANLN
AGPS
SDR39U1
DTD1
CBY3
NIBAN2
LRRC37A3
CBX4
YTHDF2
SNUPN
SDAD1
QRICH1
DCTN1
PANK3
POLR3E
PGK1
BEGAIN
TECTB
REXO5
ERI2
ZNF24
HNRNPLL
C1QBP
NDUFB4
KLHDC8B
CRYGB
CCDC71
UQCR11
SNRPD3
GUCD1
TRAF6
RAG1
ELAVL3
SRC
PGPEP1
NFE2L2
SUOX
ATG4D
SPTBN4
RBPMS
PGC
GABPB2
RNASE4
PPAN-P2RY11
PPAN
ID1
ANG
BDH1
STARD3NL
ADA
COQ7
SNX8
YEATS2
C5AR1
ATG9B
ABCB8
DPP9
CDK11B
TSKS
EHF
AP2A1
AJUBA
COL21A1
AMOTL1
INAFM2
ZNF713
TMEM18
STXBP3
ERCC6L2
RGL2
C3
PCK1
CYGB
ZMYM1
RPL35A
IQCG
TMEM41A
TBPL1
MRPS15
DYNLRB1
VTA1
OPRL1
NMBR
MTRNR2L10
CTSZ
WDR36
POLR1H
MRPL58
MAST3
CRTC1
PCBD2
HOMEZ
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27