ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741419 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX16386912: 293

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX15039987: MDA-MB-231

◢ SRX15039988: MDA-MB-231

◢ SRX15039990: MDA-MB-231

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◣ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX15039983: T-47D

◢ SRX15039985: T-47D

◢ SRX15039986: T-47D

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

MTRNR2L8
SPAAR
CCIN
GTF2H4
TRMT10A
MTTP
VPS37D
PSMB6
ZNF335
CCDC107
PTPRF
ZMAT2
CYRIB
TBC1D4
LPIN1
MRPL45
RASA2
NEURL4
RXRA
FBXO43
CAVIN1
SLC39A11
NUDT9
MTRNR2L1
MTRNR2L2
MSH3
DHFR
HEATR3
ENGASE
HLA-E
SLC35E2A
BORCS7
RNF216
YWHAG
SMU1
CTNNBL1
PRMT1
ADRM1
TEF
NLRX1
PIH1D1
ALDH16A1
UBFD1
EARS2
ZDHHC12
AHCY
RGPD2
RGPD1
RNF24
NCOA5
COL23A1
MRFAP1L1
KXD1
OSCAR
NDUFA3
SP2
MED23
TESK1
SLC31A1
FKBP15
MELK
UBE2V2
WDR43
WDR59
KRT15
SLC29A3
CRYAA2
CRYAA
TOR1A
PAXX
CLIC3
HAS1
KCTD2
ATP5PD
CLTA
TOMM7
NR6A1
OLFML2A
XKR8
C19orf25
CNOT11
CIAO3
STOML2
PIGO
SMCO4
MCC
MT1M
MT1E
MAMDC2
GTPBP6
STK10
CHMP6
CDK12
FBXW5
C8G
TCTN3
CLPB
TLN1
CREB3
DPH5
DAAM1
PRR5L
COMMD9
GRSF1
PRR30
PREB
SCFD1
HCAR3
PLIN3
MEF2D
DYM
PHKB
ITFG1
MRFAP1
MATR3
LTO1
TMCO6
CD14
LTBR
RPS14
ZCCHC14
RIN2
FXN
UBOX5
FASTKD5
PLD1
CWF19L2
CCDC200
PRMT5
CABLES2
PMEPA1
LSP1
TMEM51
AARS2
SRRD
HPS4
SGSM1
UTP25
ELP3
DPEP1
PAXBP1
KDM3B
ICMT
IFNGR2
UBE2L3
TRMT1
NACC1
TIA1
EPRS1
DRG2
CACTIN
NUP85
ARNT
ZNF131
CHRNA9
AP2S1
EED
DLAT
ZDHHC24
ACTN3
MSMP
ZCCHC4
PRPSAP1
NPR2
TACO1
EMC8
COX4I1
SMARCD2
PTPN1
CDYL
ANKRD46
ADGRG1
SYMPK
FOXA3
HRCT1
RAB5B
MLLT1
TKT
RFX1
CLPP
TDRD7
SOGA1
EPS15
SLC25A20
SPAG8
HINT2
DMAP1
LOC112267881
NCR1
TENT2
SLC26A8
MAPK14
MTBP
MRPL13
OSGIN1
DNAJC19
ALDH3B1
SERPINB1
UNC93B1
GHITM
UIMC1
TAF1C
ADAD2
ASMTL
RPTN
RPL6
ARHGEF39
MTOR
SLC25A16
NUDT2
KIF24
LSM14B
CRLS1
GGCX
ST6GALNAC4
ZNHIT6
UTP3
SYNJ2
PSMD4
SLC38A10
MT1F
MT1B
SIT1
PITPNM1
PDE4A
ARHGEF1
GABARAPL1
ARHGAP39
FANCG
RCN1
SIRT5
UBXN4
SLC35A4
APBB3
CLK3
RBM4B
AKIRIN2
ZFAND1
RIF1
CIZ1
PARG
CXADR
GPCPD1
DOT1L
VPS13B
COASY
RFX7
TEX9
TRABD
LOC730098
CCL27
PKD1L2
CDC25B
STX16
LIMK1
SLC25A25
NAIF1
CETP
SSBP1
TBC1D16
KCTD18
ERICH4
DMAC2
KLF5
C6orf226
TTC38
PKDREJ
RAC1
LSM5
AVL9
COX16
METTL14
WDR74
SYT11
GON4L
PEX3
ADAT2
LMTK3
CLCF1
ZBED9
DUX4
CNN1
ATP13A3
TIPIN
NUCKS1
MKNK2
RUSC2
SF3A3
GSN
RAB14
RPL36
IER3
FLOT1
FKTN
SARS2
MRPS12
PPP6C
IL1RAP
CLUAP1
C16orf90
TRIOBP
ARTN
PPIL3
NIF3L1
DPY19L4
ENSA
DPP3
PKD2L2
ZNF638
SRXN1
TCF3
TRIP4
SEC14L1
ELK3
HUS1
CDK8
CDAN1
FAM200B
RAD52
CEP164
FOXK2
GORASP2
BCAR1
PFDN2
NIT1
SMG8
SEPTIN9
SEC13
CFDP1
MTHFD1L
ST6GALNAC6
CKM
NDUFS7
PDCL3
EEF1AKMT1
ADAMTSL5
RBM45
PDE11A
IER5
PRSS16
PDSS2
MDFIC
PAK4
LAPTM5
FRG2
GNE
TNS4
FASN
RBM12
CPNE1
CDK5RAP1
SNU13
WDR70
EIF3C
GSTA4
TGM2
NEDD1
EGR1
TBRG4
ATG16L1
SPATA2
AKNA
ZNF184
SCAMP4
ADAT3
ADNP
GLIPR1L2
MMS22L
SLC30A6
ZNF764
PMM1
TJP3
PSCA
ARFGEF2
DAGLB
LARP1
METRN
DGKZ
ELOVL6
ATG4C
PCCB
TSACC
CCT3
USP45
TSTD3
GADD45B
COX5A
MRPL38
TGDS
UBE4A
AP3B1
LFNG
AARSD1
TRAPPC3
TRIM45
RPS6
EIF2D
AHSG
FAF1
ADGRA2
CHST15
ST3GAL4
COL18A1
POU2F2
DAB2
SIRT4
ZC3H15
MVB12A
MEGF9
GPSM2
PLXDC1
CCNC
POLG2
NELFCD
PCGF2
PHC2
RPL37A
COX7A2
ZSCAN9
RPL10A
GRAMD2B
RAB5C
PPP1R13L
POLR1G
SHFL
TMEM214
CDKN1A
PLEKHG4
HAX1
SLC44A1
CHERP
FAM8A1
IL31RA
NEMF
GTF2H5
INO80C
TPK1
PGLS
SLC7A2
TRAPPC9
FPR1
HNRNPD
THEMIS2
SYNGR2
TIMM23
VKORC1
SPHK2
RPL18
FAM83E
PITPNA
NICN1
TPM2
SLC27A1
RPP25L
KLHL20
ODF3L2
WDR7
IP6K3
SELENOH
MADCAM1
MEST
MARS1
ARHGAP9
EIF5A2
CDA
NLRP1
ATF6
CASTOR1
ACOT9
KIF16B
RAB2A
EMC4
SUN1
ELFN2
RAN
FGFRL1
EIF3CL
CCNT1
HPS6
ERCC1
GEMIN6
ADPRHL1
MT2A
BRAP
ACAD10
MLXIPL
NBN
HPS1
HIBADH
TIMM22
ZBTB5
C9orf131
TMEM184A
MPRIP
KRBA2
WIPI2
MAD1L1
DIPK1B
DYNC2I1
PLEKHG2
PTK2B
MTF2
NIPA2
LPAR2
RIC8A
BET1L
ZZEF1
CYB5D2
FAIM
COMMD6
ZNF789
SETD1A
NDUFS5
RIPOR3
CDC5L
NKIRAS2
DNAJC7
CASC3
RBBP5
HMGN4
RBM12B
DCAF7
NOP53
C1QTNF1
TNFRSF6B
ZNRF1
MANBAL
MACC1
TGM3
PLEKHM2
CEBPD
IL11RA
CCDC42
IRGC
CRH
MAP3K10
MRPS33
DHX16
ECSIT
FAM156B
FAM156A
SLC35B1
ISOC2
ZER1
SRI
SLIT3
ZBTB3
ZNF234
RPAP1
BRIX1
ETFB
OMA1
DAB1
PMAIP1
LIMS1
ZNF93
ICAM1
NDUFAB1
FBXO46
IGSF10
CPT1A
DIO1
PTPN3
ATXN7L2
DOLPP1
GNA13
BCL9
KCTD3
CP
LMO7
H4C6
RPL38
UBE2Q1
COPS4
AP3M2
RABGEF1
PFAS
DEF8
SLC27A4
ARHGAP24
FRG2C
GBA
C1QTNF8
CNOT3
SORBS1
TERF2
SNX16
PSMD9
HPD
ZFP36L1
TFB1M
SLC39A10
SWSAP1
DDX17
UEVLD
AP2A2
TIPARP
LGR6
MRPL39
PDCL
PIGBOS1
PIGB
PDLIM7
ZNF77
SPAG4
PPP6R1
CPPED1
HNRNPA2B1
CBX3
MEGF8
CHST12
ADGRL1
SRPK1
SH2B1
RABGGTA
CCDC22
CACNA1F
SRCIN1
SPATC1L
GLIS2
RIOX1
USP35
KCTD21
F2
KDSR
KIF2C
DCDC2
ILF2
MRPL35
IMMT
NPAS4
RAPGEF1
TRIM26
TIMM9
KIAA0586
FBXL19
LUC7L2
RHOD
RPS29
IRF2BP1
EFR3A
KANSL3
FER1L5
STX6
GALNT10
TCIRG1
CSF3R
NAE1
ATP5MC1
MRPL54
APBA3
FMC1-LUC7L2
FMC1
GPR137
FKBPL
ATF6B
NEK6
LDLRAP1
GADD45GIP1
TFAM
SCML1
GPR160
RAB11B
MLX
ARPC3
DTD1
PTPRA
TP53I11
SREBF2
PRRT3
TMC6
WASF2
TP53RK
SLC13A3
PPP5D1
CALM3
TMEM161A
MICALL2
DIDO1
ALDH18A1
ATP6V0E2
ZNF687
BAD
ZNF555
RNF114
RPS12
SYT7
MEX3C
CYLD
KANK2
POFUT1
PLAGL2
CTR9
KAAG1
TUFM
GNG7
KTN1
PARP2
PRR5-ARHGAP8
PRR5
PRELID2
TK1
ZFAND4
ZNF609
AKT2
TMEM107
MDGA1
SEMA4B
HOOK1
VPS37C
ZNF500
CDON
GRPEL2
KIFC3
RGL2
COMMD2
SREBF1
MFSD4B
EIF5A
H6PD
TSC1
GFI1B
MTHFSD
NCAM2
NUF2
STX10
IER2
RAB4B
MIA
RPL27
RBM5
TAC4
PHF23
GABARAP
PPP2R2A
LRRC37A3
DPP9
OR2T1
ZSCAN25
TRIM55
PDLIM1
SPOCD1
KLF1
GCDH
POLR2J3
NUDT3
CTDSP1
NCOA6
MTMR14
TRAF6
RAG1
TRAPPC6B
PNN
SNRPC
KIAA0895
GPR84
ANLN
RCC1
DNM2
YEATS2
RASA4
IQCE
BRAT1
ZNF606
RNF213
ABRAXAS2
WNT7B
CYB5B
ZBTB40
CORO1C
C8orf37
YPEL3
TTYH3
TBX6
HM13
HES7
ALOXE3
SLC25A44
H4C3
H1-6
AURKAIP1
GTF3C3
LZTS3
PRUNE1
MINDY1
TIGD1
EIF4E2
SEPTIN7
E2F6
BDH1
SPC24
LIME1
RTKN
USP42
TMEM41A
STRBP
B4GAT1
SUOX
GRK6
SH3GLB2
POLDIP3
ARID1A
RNF187
TADA1
RAB8A
FCMR
MTRNR2L9
LOXL4
ZBTB43
SLC25A39
ACTL6A
C1orf198
ADAM19
CIBAR2
EPC2
PPP1R9B
TEX46
KDM1A
BCL9L
HIBCH
STAT3
LRP5L
HEXB
RASA4B
ATG9B
ABCB8
STARD13
BANP
ZNF713
PGPEP1
MELTF
ZBTB7B
MNT
TMEM242
FAM161B
COQ6
EXD1
CHP1
FBXL18
UBE2F
MRPL44
CDT1
CBX4
ELAVL3
SCGB1C1
VCL
AMOTL1
FUT10
SLX4IP
MKKS
TTI2
FBXO11
CLTB
TRIM32
ASTN2
MOSPD3
PHF19
CENPN
SMN2
SMN1
CERCAM
ASF1B
ZNF443
MYNN
ACTRT3
TOP1
ZBTB45
TSNARE1
STARD3NL
NEK10
TMC8
NCOA7
GAMT
FABP1
CAMK1
ARHGEF11
AMZ2
BCAS1
S1PR4
ATP6V0E1
RPS7
TMCO3
DCUN1D2
PNPLA6
TIMM10
IL12RB1
DSN1
SDAD1
CBX1
PANK3
RS1
PPEF1
PFN1
EHF
SLURP1
ATP5MC3
NOM1
PHLDA2
LRP5
NDE1
MARF1
OPA3
DHX15
DDX18
ZNF771
POLG
ASXL1
TIMM17A
C16orf70
PSMF1
SHISAL2A
TPP2
SH3PXD2B
WWOX
TM9SF4
PPP1R9A
FAM168B
SNUPN
EBI3
BAIAP2
UROS
BCCIP
NUTM1
NOP10
TMPRSS9
SCGB1C2
MBD4
IFT122
SNX15
RIN3
ZNF799
PSMD3
MRPS23
BRMS1
SNX8
SLC12A4
NUDCD3
HOMEZ
INF2
STK4
OGFOD1
NUDT21
CYP2R1
RMND1
H4C8
ARMT1
PISD
TADA3
ARPC4-TTLL3
ARPC4
VARS1
NIPA1
PTEN
KLLN
SMG5
ATR
LY6G6F-LY6G6D
LY6G6F
ABHD16A
ZNF195
RPL35A
POLR3E
IQCG
ZNF343
ASGR1
ZNF572
PDE6B
CDK9
FEM1A
H2BC12
H2AC12
FOSL2
TMEM79
MED18
EFNA4
INKA2
IFNAR1
CDK11B
TGFB1I1
NIBAN2
BORCS6
GABPB2
EAPP
ABCA1
VAT1
RND2
KATNIP
GTF3C1
DENR
MOK
DGAT2
RUNX3
SRC
PKN3
BNIP5
ID1
DCT
ABHD3
STXBP3
RTBDN