ChIP-Atlas: Target genes

Potential target genes for CDK12

Query protein: CDK12
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5975300 | 143B
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDK12's Target genes

◢ CDK12: Average

◣ SRX5975300: 143B

◢ SRX5975305: 143B

◢ SRX14276667: 293

◢ SRX1144285: Jurkat

◢ SRX5975310: MG-63

◢ SRX5975315: MG-63

◢ SRX728789: THP-1

◢ SRX728790: THP-1

◢ CDK12: STRING

STX16
MRPL21
IGHMBP2
DMAP1
ITGB3BP
EFCAB7
ZBTB45
SLC27A5
DCP1A
FRA10AC1
TRIP4
PCLAF
EIF1AD
CST6
BANF1
MRPL44
NDUFS3
KBTBD4
FAM180B
ALKBH3
NME1-NME2
NME1
SF3A3
MRPL40
HIRA
STX18
SUPT7L
SLC4A1AP
MRPS31
STMN3
RTEL1
TM9SF1
IPO4
NDUFB3
FAM126B
RAD54L2
VPS13B
AP3S2
GTF3C3
C2orf66
BMS1
CDK5RAP1
INTS12
GSTCD
UBE3B
USP30
GTF2H2C
GTF2H2
AAR2
PDE6D
COPS7B
NDUFS7
MED23
ENPP3
BBS1
MTBP
MRPL13
DUS1L
WDR11
NSA2
GFM2
CCAR2
C8orf58
HMGB1
USPL1
ISY1-RAB43
ISY1
DPY19L4
ZNF408
ARHGAP1
TBC1D19
TUT1
MTA2
MAN2C1
MLEC
FAM207A
GALK2
COPS2
TMEM242
DCAF10
COMMD2
SEC13
SMG8
RPS7
RTTN
TACO1
ZNF165
OR1F12
AURKAIP1
REXO4
ADAMTS13
TTC4
EXD2
DRG2
PRRG2
NOSIP
RBBP5
WDR97
MAF1
CYC1
GOLGA3
TNPO3
GTF2H2C_2
RPL37
CARD6
BRF2
TMEM41A
SLC33A1
PEX3
ADAT2
SNAP47
JMJD4
ZNF770
NUF2
OTUD7B
METTL9
NUPR2
CHCHD2
PIH1D2
NKAPD1
TMEM262
DSTYK
SSBP1
MRPS18C
HELQ
WDR24
STUB1
JMJD8
SLC24A1
INTS14
TMEM222
TOP3B
PSMF1
ALG10B
LSG1
MNAT1
NR1H3
ACP2
UTP3
ZNF296
GEMIN7
NMNAT1
LZIC
SELENOH
RPS5
NOL12
FAM98B
SUGCT
MPLKIP
ZDHHC6
VTI1A
HEMK1
C3orf18
NDUFC2-KCTD14
NDUFC2
WDR36
TVP23B
ZMPSTE24
TMCO2
MKRN2OS
MKRN2
MRPL48
SMG7
CCDC97
NSFL1C
POLD1
NR1H2
CGGBP1
C3orf38
HDAC8
EIF3F
WBP1
INO80B
VPS45
HNRNPA1L2
UBA5
ACAD11
VPS9D1
TATDN3
NSL1
ZSCAN22
TOR1AIP2
TOR1AIP1
C11orf49
MRPL1
FAM227B
DTWD1
FAM228B
TP53I3
SF3B6
STOML2
PIGO
FAM214B
AQR
NUP54
RPL29
PEMT
HUS1
ADPRHL1
PDCD6
PCID2
CUL4A
COX16
RNF6
NDUFAF1
ACSF3
ZNF207
C17orf75
FEM1B
SLC25A53
FAM199X
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
GMEB2
RFXANK
BORCS8
CSTF2T
PTPN21
SPAG8
HINT2
SLC35A3
BSPRY
LRRC49
THAP10
RAB18
C10orf88
SEC22B
PHB2
SCAND1
POLR3B
C18orf21
YJU2
NKAP
KCTD5
CCDC57
DHX33
MITD1
PLEKHM3
NOXA1
TEFM
INTS5
GANAB
EAPP
PPIP5K2
GIN1
EDC4
RUVBL1
EEFSEC
TEDC1
CRIP1
SAR1B
METTL15
KIF18A
GTPBP3
ANO8
TMED9
B4GALT7
NOP16
HIGD2A
MRPL3
THEM4
PIGL
NCOR1
SNRPB
TIGD1
EIF4E2
TRUB2
COQ4
PSMG3
PUS10
PEX13
SEC11A
ZNF791
ZNF490
MRPL16
TDG
C12orf73
TTC26
MRPL58
DNAJC25-GNG10
DNAJC25
BLOC1S6
SLC39A4
CPSF1
MPHOSPH10
MCEE
SLC44A1
TSPAN10
NPLOC4
SLC39A13
TMEM101
ZER1
WDR25
WARS1
GTF3C5
SNRPD3
GUCD1
KLHL20
LTN1
PDXK
MTMR9
MTOR
RBM28
NXT2
PSD
FBXL15
EIF2D
NFKBIL1
DDX39B
ATP6V1G2
TIGD6
HMGXB3
LAS1L
MST1
STARD3
PPP1R1B
YIPF2
TIMM29
WDR83OS
WDR83
MAN2B1
ZKSCAN8
COL23A1
NOL8
CENPP
ZNF581
ZNF580
DDX1
VPS52
RPS18
B3GALT4
MEIG1
DCLRE1C
RRP15
ANAPC5
RAG2
IFTAP
WNK4
VPS25
ZBTB33
SENP1
PFKM
UQCC1
CPPED1
MAMDC2
GRPEL2
COA6
TMA16
PPIL1
C6orf89
ZNF391
FBXO22
MRPS22
TIMM9
KIAA0586
BCAT2
TRMU
VARS2
GTF2H4
TXN2
PPIL3
NIF3L1
MTRNR2L2
MSH3
DHFR
METRN
HAGHL
CCDC78
ANTKMT
CFAP298-TCP10L
CFAP298
MTIF2
WDR74
STX5
AGO3
SLC39A3
TSEN15
NUDCD3
ZNF205
TRDMT1
ZBTB11
RPL24
LSM5
AVL9
AGK
SPSB3
NME3
MRPS34
EME2
ALG10
ZNF195
MTRNR2L8
YBEY
MCM3AP
TMEM107
AFAP1
SDHAF3
DPP9
GABPA
ATP5PF
MTRF1
CCDC106
DUX4
PCYT1A
MBTPS2
COPS4
CYREN
BANP
TMEM69
GPBP1L1
ZNF461
ZSCAN10
SLC25A21
POLDIP3
TUBGCP3
MRPL39
STPG3
NELFB
FAM166A
C8orf33
TBC1D13
DNAJC24
DCDC1
SRP19
MTRNR2L1
ZNF561
NUP153
CCNC
ERI1
EMC4
KIF22
MMP8
KIF5C
NSUN4
PTPRM
ZNF668
ZNF646
ANKRD40
NUP107
TEX9
RFX7
TSSC4
PARP16
RGS14
LMAN2
TDP2
ACOT13
ZSCAN9
PLD4
PROX2
YIPF3
POLR1C
LRRC73
ZNF302
TEX38
ATPAF1
SEPTIN4
MTMR4
OPA1
TMEM68
TGS1
GFM1
OPRL1
TXNDC9
EIF5B
MFAP3
FAM114A2
RNF39
PPP1R11
POLR1H
KRR1
ERCC6L2
TMEM128
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
CACNG8
ZNF564
MED18
SNRNP200
CCDC200
PTPRN2
ZNF622
NDUFA12
ZC3HC1
MAGEF1
SEC16B
LIG4
ABHD13
PSMC2
DNAJC2
TMEM30A
SRSF7
PSMD6
SREK1IP1
CWC27
ACBD6
PDCD2
FAM168A
ZNF596
ECHDC1
TAF12
C16orf46
SDR39U1
EXOSC3
C4orf3
ZKSCAN4
NKAPL
NAA20
FBXW11
VIM
H3C13
H2BC18
ZNF623
IPPK
ZNF846
PRORP
PPP2R3C
ZNF579
FOSL1
FIBP
CCDC85B
TBX15
PRPF3
TYW1B
MTR
USP21
UFC1
NEU3
OSGIN1
VPS26C
RSL24D1
PSME3
BECN1
CARD8
VWA8
JRK
MRPL53
MOGS
FAM118A
ZSCAN12
L3HYPDH
KDM5A
JKAMP
CCDC77
SMIM26
RFC4
MANBAL
SLC22A18
CDKN1C
MTHFD2L
LCORL
PIP4P1
OSGEP
APEX1
EHD2
CAST
ZNF410
OGFOD2
ARL6IP4
TYW1
SBDS
ABCB9
PRSS27
GSTT2B
GSTT2
DDTL
DDT
UNC50
COA5
CSTF2
RGS19
LKAAEAR1
DNAJB12
IGBP1
ZNF549
MARK3
ZNF697
TSPO
MCAT
SPATA6L
PLPP6
PLEC
PARP10
GRINA
COQ3
TM9SF3
TBRG4
ATG5
CLK3
NIPBL
ABRAXAS1
SPCS1
GLT8D1
SPATA5L1
GATM
LINGO2
USE1
ELMOD2
PDCD6IP
H2BC21
H2AC21
H2AC20
RARS1
HSPA5
MUC3A
TPD52L2
ABHD16B
STMP1
TTPAL
GPR137
FOLR1
RPS20
EIF3D
LYPLA2
GALE
APEH
VILL
NUDT5
CDC123
DPH7
MRPL54
APBA3
PSMA5
TPM3
DCUN1D5
GPAA1
EXOSC4
SLC35C2
ARID4A
NCBP2AS2
NCBP2
MX2
PYURF
PIGY
HERC3
METTL6
EAF1
RSPH3
RPS27
RAB13
CALM1
SUGT1
SRSF2
MFSD11
MTG1
TP53RK
SLC13A3
SIT1
UBIAD1
WDPCP
MDH1
RPL27A
GOSR2
NOP2
TTC14
PARP2
CCNB1IP1
RGPD2
RGPD1
RCC1
VIPAS39
AHSA1
SNRPD1
CYSTM1
FBXW8
LRRC58
EIF4G2
CRYAA
CRYAA2
MAP2K5
RPS2
RNF151
RPL3L
NDUFB10
MSH4
DTD1
TLCD5
ARHGEF12
UCN3
CAP1
PNPO
PTPN6
C12orf57
CD68
EIF4A1
DPP8
POC5
TANK
CRIP2
SH2B1
TUFM
NCAPD2
MRPL51
ALDH3A2
NOTCH2NLA
YRDC
C1orf122
CPEB4
PHGDH
NEK9
PRKAB1
FOS
CAAP1
PNP
PFDN5
MYG1
SRBD1
TMEM167B
TTC23L
SPSB1
SAMD1
MISP3
C19orf67
COQ10B
CHID1
MVB12A
RAD23A
CALR
PPIF
TPRKB
UACA
LINGO1
ZCCHC7
FAM187A
EFTUD2
CCDC103
CNPY3
HSPBP1
BRSK1
GEMIN2
H2AX
DPAGT1
C2CD2L
SAV1
PIGC
C1orf105
SARAF
PGGT1B
CBLL1
VPS53
TNFRSF12A
THOC6
HCFC1R1
CLDN6
DDX21
HP1BP3
HNRNPA2B1
CBX3
CCNL1
ATP2A2
NVL
EIF4A3
GAS8
DIS3L2
ETV4
H4C9
H2BC11
H2AC11
EEF1A1
HSPA8
KNSTRN
MSANTD2
TAF13
FCF1
AREL1
SMC4
IFT80
ZSCAN20
WARS2
ZNF35
UGGT2
C8orf76
TRIM4
SEC61G
GJC3
TVP23C
PITX3
GBF1
STYXL1
SLF1
KIAA0825
WDR43
MAPK1IP1L
SMARCA5
FBXW2
POLR1B
RPS6
BZW2
ANKMY2
GORASP2
MRPS30
COL6A2
PSMG1
TOMM5
TMEM184C
SLC30A6
SEC23A
TAGLN2
ZSCAN25
CCNT1
LAMTOR5
SLC7A5
KLF13
EXOC3
VAMP2
PER1
MCL1
CCDC22
CACNA1F
CALM2
ENOSF1
KTI12
IER3
ICE2
FLOT1
CEBPB
APBB2
NFKBIZ
C15orf61
ID1
INVS
ERP44
WDR4
RPL26
KRBA2
EIF4A2
ITPRID2
CSE1L
ING5
RMDN2
MOB4
RASA3
SIRT4
MPDU1
LOC100996842
SOX15
APMAP
OXNAD1
DPH3
PRDX3
HSP90B1
PUM3
STK36
RNF25
CCT2
CLOCK
CCDC14
H2BC12
H2AC12
NDUFAF2
ERCC8
G2E3
RRAD
CIAO2B
CES2
TRAPPC6B
PNN
TRA2B
SNW1
DYNC1H1
PRPF38B
MYL12B
MYL12A
CDC25A
PHRF1
CRYM
MRPL27
EME1
CACYBP
MUL1
FIP1L1
SP3
FSCN2
PA2G4
DDX19A
SLC16A1
H4C12
H4C11
H2BC14
H2AC14
IPO7
GTF3C6
H3-2
EFHC1
GPR61
GNAI3
ZNF3
COPS6
SERBP1
LCMT2
ADAL
RFC2
PSMB4
TTYH2
RPL38
THEG
S100A10
ZBED9
UBTD1
MMS19
FRG2
DDX18
ADK
PHKA2
PRPF18
RPLP1
PARP11
UBE2M
CHMP2A
DUT
NKX1-1
MTMR6
FBXO38
GTPBP6
UBAP2L
C1orf43
PAFAH1B2
YKT6
SLC25A46
MOCS3
DPM1
ASAH2B
VPS36
CKAP2
HIPK1
DBNL
SPDL1
PPIA
LATS1
SLC25A32
DCAF13
RPS11
RPL13A
SLC25A3
ADORA2B
TM9SF2
SLC10A5
IMPA1
STAU1
DDX27
MAP3K7CL
GRPEL1
CCT8
PCIF1
SLC6A6
NOTCH2NLC
AZIN1
MINPP1
CDCA7
TOMM22
THUMPD3
RPAIN
NUP88
SMIM15
KLHL21
IFI27L1
HMX2
DDX24
BUB3
ACBD5
PBX2
GPSM3
GOLPH3
FER
SCO1
ADPRM
PLAG1
CHCHD7
RPL32
WDR55
DND1
H1-2
CNBP
TYMSOS
TYMS
SPG11
FAM149B1
ECD
KIF2C
ERGIC3
SLC5A5
RPL18A
MTHFD2
RPL22L1
MRPS21
PRR3
GNL1
PRADC1
CCT7
CTR9
COX18
RPS23
ATP6AP1L
INKA2
DDX20