ChIP-Atlas: Target genes

Potential target genes for CDK12

Query protein: CDK12
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5975305 | 143B
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDK12's Target genes

◢ CDK12: Average

◢ SRX5975300: 143B

◣ SRX5975305: 143B

◢ SRX14276667: 293

◢ SRX1144285: Jurkat

◢ SRX5975310: MG-63

◢ SRX5975315: MG-63

◢ SRX728789: THP-1

◢ SRX728790: THP-1

◢ CDK12: STRING

KIF5C
MTRNR2L8
MTRNR2L2
MSH3
DHFR
RGPD2
RGPD1
MRPL21
IGHMBP2
COL23A1
STMN3
RTEL1
SUGCT
MPLKIP
ZBTB45
SLC27A5
DPY19L4
TBC1D19
ACSF3
MTRNR2L1
CCDC97
STX16
USP30
DUX4
NME1-NME2
NME1
AAR2
ZMPSTE24
TMCO2
EIF1AD
CST6
BANF1
MTBP
MRPL13
CSTF2T
EMILIN2
UBE3B
ZDHHC6
VTI1A
OTUD7B
MAN2C1
VPS9D1
RAD54L2
CCDC57
STX18
PEMT
ZNF408
ARHGAP1
GOLGA3
RTTN
GTF2H2C
GTF2H2C_2
DUS1L
FEM1B
EIF3F
MED23
ENPP3
BMS1
WDR83OS
WDR83
MAN2B1
REXO4
ADAMTS13
NR1H3
ACP2
ISY1-RAB43
ISY1
SUPT7L
SLC4A1AP
EDC4
ITGB3BP
EFCAB7
RNF6
DCP1A
BBS1
MRPL44
TMED9
B4GALT7
SEC13
FRA10AC1
GTF2H2
NDUFS7
SLC35A3
NUPR2
CHCHD2
SLC33A1
NOL12
GTF3C5
TM9SF1
IPO4
TMEM41A
AFAP1
ZNF296
GEMIN7
TMEM262
ALKBH3
ZNF165
OR1F12
NUDCD3
SMG8
PTPRN2
SLC24A1
INTS14
VPS13B
NDUFS3
KBTBD4
FAM180B
DCAF10
ZNF561
WDR24
STUB1
JMJD8
MLEC
NDUFAF1
ADPRHL1
MAMDC2
PSMG3
INTS12
GSTCD
POLD1
NR1H2
HUS1
UBA5
ACAD11
TACO1
VPS52
RPS18
B3GALT4
CGGBP1
C3orf38
SCAND1
CCAR2
C8orf58
PDE6D
COPS7B
NDUFB3
FAM126B
HMGB1
USPL1
MRPL48
TTC4
PTPN21
DMAP1
RFXANK
BORCS8
ALG10B
CDK5RAP1
NOXA1
COX16
HEMK1
C3orf18
ZNF770
HDAC8
WDR11
WBP1
INO80B
MRPS31
NOL8
CENPP
ZSCAN22
TOP3B
MRPL1
RPS5
PHB2
PSD
FBXL15
STOML2
PIGO
FAM214B
PSMF1
RBBP5
NOP16
HIGD2A
TEDC1
CRIP1
TRIP4
PCLAF
RRP15
AURKAIP1
MRPS18C
HELQ
EXD2
C10orf88
TNPO3
NMNAT1
LZIC
FAM207A
MNAT1
COMMD2
METRN
HAGHL
CCDC78
ANTKMT
PIH1D2
NKAPD1
TVP23B
TIGD1
EIF4E2
SENP1
PFKM
SF3A3
MRPL40
HIRA
NSA2
GFM2
ZNF791
ZNF490
GTPBP3
ANO8
POLR3B
TMEM222
WNK4
VPS25
BLOC1S6
MRPL3
MKRN2OS
MKRN2
DSTYK
AP3S2
TEX38
ATPAF1
BCAT2
MTRNR2L9
SLC39A4
CPSF1
UTP3
ZNF391
C11orf49
GMEB2
DRG2
NDUFC2-KCTD14
NDUFC2
GTF3C3
C2orf66
MITD1
ZKSCAN8
ZNF302
CPPED1
WDR97
MAF1
CYC1
TATDN3
NSL1
FAM98B
MST1
GALK2
COPS2
SELENOH
MRPL16
AQR
ZNF205
SPAG8
HINT2
SNX16
TRMU
STARD3
PPP1R1B
LSG1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
TSPAN10
NPLOC4
YBEY
MCM3AP
SNAP47
JMJD4
SLC39A13
THEM4
CYREN
FAM227B
DTWD1
VPS45
NSFL1C
MTOR
PEX3
ADAT2
TOR1AIP2
TOR1AIP1
YIPF2
TIMM29
SMG7
HNRNPA1L2
SLC25A53
FAM199X
TRUB2
COQ4
MEIG1
DCLRE1C
CLK3
LRRC49
THAP10
COQ3
RPL37
CARD6
PUS10
PEX13
AGK
OGFOD2
ARL6IP4
SNRPD3
GUCD1
BRF2
ZER1
PLEKHM3
FBXO22
FAM228B
TP53I3
SF3B6
MRPS22
METTL9
YIPF3
POLR1C
LRRC73
TEFM
C18orf21
TXN2
PDXK
TIMM9
KIAA0586
DDX1
TRDMT1
RUVBL1
EEFSEC
CFAP298-TCP10L
CFAP298
EIF2D
TMEM69
GPBP1L1
PCYT1A
RPS7
NUDT5
CDC123
NUF2
SSBP1
SLC44A1
MTIF2
MPHOSPH10
MCEE
TMEM101
TSEN15
VARS2
GTF2H4
SPSB3
NME3
MRPS34
EME2
SAR1B
RPL29
MARK3
STPG3
NELFB
FAM166A
FRG2
TUT1
MTA2
ALG10
NUP54
BSPRY
PPIL1
C6orf89
PIGL
NCOR1
PDCD6
WDR36
LTN1
RGS14
LMAN2
TDG
C12orf73
PROX2
SLC39A3
TMA16
PPIL3
NIF3L1
BANP
KLHL20
PCID2
CUL4A
ERI1
FAM118A
TBC1D13
LAS1L
TMEM242
RAG2
IFTAP
ZNF581
ZNF580
CCDC106
PLD4
DHX33
ZBTB11
RPL24
SEC22B
SREK1IP1
CWC27
OPRL1
CCNC
CACNG8
MRPL58
TTC26
MTRNR2L10
NXT2
SNRPB
GRPEL2
WDR25
WARS1
ZBTB33
ZNF207
C17orf75
PPIP5K2
GIN1
ANAPC5
MUC3A
ZNF461
ZNF195
RGS19
LKAAEAR1
FOLR1
PRRG2
NOSIP
INTS5
GANAB
DNAJC25-GNG10
DNAJC25
NAA20
METTL15
KIF18A
FRG2C
RFC4
C16orf46
ZNF562
TMEM68
TGS1
DNAJC24
DCDC1
MTMR9
GSTT2B
GSTT2
DDTL
DDT
ZC3HC1
YY1
MED18
EMC4
SEC11A
KCTD5
PHKA2
TYW1B
TSSC4
PTPRM
MAP2K5
VWA8
RAB18
MTRF1
LOC102724770
DGCR6
H2AX
DPAGT1
C2CD2L
ANKRD40
ERCC6L2
MRPL39
SRP19
KRR1
SLC25A21
TRAPPC10
YJU2
ZNF564
SIT1
ACBD6
SEPTIN4
MTMR4
SDHAF3
NKAP
LSM5
AVL9
ZNF846
ZNF410
CNPY3
ZSCAN12
NFKBIL1
DDX39B
ATP6V1G2
NEU3
OSGIN1
COA6
TIGD6
HMGXB3
PSMC2
DNAJC2
TM9SF3
MTHFD2L
TSPO
MCAT
LIG4
ABHD13
DPP9
GFM1
TYW1
SBDS
FAM168A
WDR74
STX5
RNF39
PPP1R11
POLR1H
UBIAD1
SMIM26
RBM28
SPCS1
GLT8D1
FBXW8
MFAP3
FAM114A2
SMIM19
SLC20A2
MBTPS2
DNAJB12
ZNF623
ZSCAN9
SPATA5L1
GATM
MRPL53
MOGS
EHD2
AP5Z1
CLOCK
CAP1
ZSCAN10
RSPH3
MTG1
LRRC58
TMEM30A
TUBGCP3
TMEM199
SEBOX
POLDIP2
PUM3
ZNF622
ATG5
PRORP
PPP2R3C
TMEM249
SLC52A2
FBXL6
AGO3
RPS20
UQCC1
KNSTRN
SH2B1
TUFM
ZBED9
FBXW11
GORASP2
TAF12
TDP2
ACOT13
TMEM128
NVL
EXOSC3
CBLL1
PRSS27
GPAA1
EXOSC4
USP21
UFC1
SNRNP200
ZNF549
TTC14
PTPN6
C12orf57
MAGEF1
EAPP
TTC23L
ZKSCAN4
NKAPL
ALDH3A2
PDCD2
MTR
CDC16
SLC22A18
CDKN1C
COPS4
ZNF596
C21orf91
METTL6
EAF1
TPD52L2
ABHD16B
LRRC24
C8orf82
SAMD1
MISP3
C19orf67
TXNDC9
EIF5B
PSMD6
PRKAB1
KIF22
PYURF
PIGY
HERC3
VIPAS39
AHSA1
PROSER1
NHLRC3
JRK
UNC50
COA5
PSME3
BECN1
SPDL1
STMP1
MSANTD2
CARD8
POC5
TMX3
CCDC102B
LCORL
ZNF668
ZNF646
TBX15
JAG2
RSL24D1
IPO7
DISP1
H3C13
H2BC18
MMP8
DCUN1D5
VRK1
DDX21
WDPCP
MDH1
PARP16
NUP153
NUP107
SEC16B
PDCD6IP
MKRN3
CCDC200
POLDIP3
GABPA
ATP5PF
ZNF579
RPS4Y1
OPA1
TEX9
RFX7
TMEM107
C8orf33
NSUN4
IPPK
PPID
ZNF558
ZNF570
ZNF569
ZNF696
NGB
DPH7
PRR35
PIGQ
NHLRC4
C1orf198
ECHDC1
VIM
ABCB9
USE1
LSM10
VPS26C
LRRC8A
KYAT1
NFIB
SRSF7
CCDC152
ACSL3
FBXW2
FKBP3
FANCM
VAMP2
SIRT4
GTPBP6
CSTF2
NDUFA12
CRYAA2
CRYAA
SLC35B2
C4orf3
SDR39U1
STK3
RPL27A
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
CD68
SPATC1L
MVB12A
PER1
EIF3D
GAS8
HSP90AB1
C8orf76
SUGT1
PSMD11
SPAAR
HRCT1
NDRG1
KIF2C
ZDHHC21
SCRIB
PNPO
NIPBL
MPDU1
LOC100996842
TOMM22
RAD23A
CALR
ASMT
GOSR2
INVS
ERP44
H4C12
H4C11
H2BC14
H2AC14
FIP1L1
MANBAL
WDR4
DPP8
ZBTB4
SLC35G6
POLR2A
NCBP2AS2
NCBP2
SPATA6L
PLPP6
RXYLT1
SOX15
EIF3H
CLTA
KLHL9
PRPF18
GPR137
TTLL12
SNRPD1
PRPF3
PCDH9
ZNF35
NFKBIZ
ARHGAP29
GOLPH3
VPS36
CKAP2
DDX18
NBPF1
ABRAXAS1
DTD1
ETV5
SLF1
KIAA0825
CCNL1
ADAMTS9
GNG14
SLC35C2
LINGO1
EFR3A
SELENOK
ACTR8
ZCCHC7
PRDX1
CLCC1
SRBD1
RPS2
RNF151
ATF6
SRSF2
MFSD11
MCL1
CCN2
EIF4A3
TPRKB
MFSD14A
GLO1
HIPK1
RARS1
JPT1
FUBP3
NCAPD2
MRPL51
CCL3
EBAG9
TMEM167B
PIGC
C1orf105
EFHC1
RPS27
RAB13
DBF4B
APTX
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
ARID4A
RPLP1
NOP2
SLC30A6
MTAP
PCIF1
JOSD2
ASPDH
OSGEPL1
RHOT2
RHBDL1
CAST
LYPLA2
GALE
SYNGAP1
CUTA
TRIM4
CHIC2
CALM1
TRAM2
TARS3
DIS3L2
BBS10
ARL6IP1
RREB1
ADAM17
POLR2J3
STAT1
LRRFIP2
KMT2A
RHOB
EIF4A1
ADAR
POLR2M
TUT7
TLCD5
TANK
KAT6A
PRADC1
CCT7
RMDN2
KIAA0100
SLC50A1
DPM3
ADPGK
PLEC
LMNA
CCDC38
AMDHD1
POLR1B
STAU1
SLC3A2
S100A10
FOS
DDX19A
APEH
ETV4
APMAP
HSPBP1
BRSK1
SARAF
PHGDH
HP1BP3
CCDC14
STYXL1
KIF23
GABARAP
ELP5
CTDNEP1
CEP350
TLE4
RCC1
ZC3H10
RPL41
PDE4D
H2BC21
H2AC21
H2AC20
GLI4
PPIA
ATAD2
SMARCC1
C15orf61
ZNF101
ATP13A1
ZBTB6
UAP1
RC3H2
MRM1
LATS1
DHRS11
NXF1
UGGT2
GGPS1
ARID4B
SSNA1
MAPKAP1
ANAPC2
TTI2
TERF2
MAT2A
ELAVL1
DBNL
ZNF669
STK17A
CTR9
ZBTB40
WTAP
SPTAN1
SOD2
FAM149B1
ECD
TSSK6
NDUFA13
LRRC37A3
PDK1
DYNC1LI1
PPIF
HERPUD1
CCDC22
CACNA1F
ZNF197
GMFB
ARMC1
NOTCH2NLA
TSPOAP1
MOB4
MRPL54
APBA3
KRTAP29-1
KRTAP17-1
KRTAP16-1
NOTCH2NLC
IMPACT
INTS9
HMBOX1
DCBLD2
THAP9
SEC31A
RPS6
FAM133B
ZNF326
RNF10
PSMD3
PABPC4
MAN1A2
JOSD1
GTPBP1
COQ5
MDM4
VPS53
PERP
GEMIN2
CDC42BPA
XBP1
THEM6
EIF4G2
ANO10
AKAP13
ABHD5
ZNF768
ZNF747
WDR43
TMX4
GADD45A
RPL6
PTPN11
SSRP1
SDCCAG8
P2RX3
HNRNPAB
CEP170
ASPH
UBE2S
HEATR6
MED1
JAK1
CDK12
ZNF697
TM2D3
SEC61G
RPL26
PNRC2
KRBA2
AHR
TMEM129
TACC3
SLBP
PGAM5
MBNL1
FBXL2
ELMOD2
TMEM50B