ChIP-Atlas: Target genes

Potential target genes for CDK12

Query protein: CDK12
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5975305 | 143B
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDK12's Target genes

◢ CDK12: Average

◢ SRX5975300: 143B

◣ SRX5975305: 143B

◢ SRX14276667: 293

◢ SRX1144285: Jurkat

◢ SRX5975310: MG-63

◢ SRX5975315: MG-63

◢ SRX728789: THP-1

◢ SRX728790: THP-1

◢ CDK12: STRING

MTRNR2L8
MTRNR2L2
RGPD2
RGPD1
MRPL21
IGHMBP2
RTEL1
SUGCT
MPLKIP
ZBTB45
DPY19L4
TBC1D19
ACSF3
CCDC97
STX16
USP30
NME1-NME2
NME1
AAR2
ZMPSTE24
EIF1AD
BANF1
MTBP
MRPL13
CSTF2T
UBE3B
ZDHHC6
VTI1A
OTUD7B
MAN2C1
VPS9D1
RAD54L2
CCDC57
STX18
PEMT
ZNF408
ARHGAP1
GOLGA3
RTTN
GTF2H2C
GTF2H2C_2
DUS1L
FEM1B
EIF3F
MED23
BMS1
WDR83OS
WDR83
REXO4
NR1H3
ACP2
ISY1-RAB43
ISY1
SUPT7L
SLC4A1AP
EDC4
ITGB3BP
EFCAB7
RNF6
DCP1A
BBS1
MRPL44
B4GALT7
SEC13
FRA10AC1
GTF2H2
NDUFS7
SLC35A3
CHCHD2
SLC33A1
NOL12
GTF3C5
IPO4
TMEM41A
GEMIN7
ALKBH3
ZNF165
NUDCD3
SMG8
SLC24A1
INTS14
VPS13B
NDUFS3
KBTBD4
DCAF10
ZNF561
WDR24
MLEC
NDUFAF1
ADPRHL1
PSMG3
INTS12
GSTCD
NR1H2
HUS1
UBA5
ACAD11
TACO1
VPS52
RPS18
CGGBP1
C3orf38
SCAND1
CCAR2
COPS7B
NDUFB3
FAM126B
HMGB1
USPL1
MRPL48
TTC4
DMAP1
RFXANK
BORCS8
ALG10B
CDK5RAP1
NOXA1
COX16
HEMK1
ZNF770
HDAC8
WDR11
INO80B
MRPS31
NOL8
CENPP
ZSCAN22
TOP3B
MRPL1
PHB2
STOML2
PSMF1
RBBP5
NOP16
HIGD2A
TEDC1
TRIP4
RRP15
AURKAIP1
MRPS18C
HELQ
EXD2
C10orf88
TNPO3
NMNAT1
LZIC
FAM207A
MNAT1
COMMD2
ANTKMT
PIH1D2
NKAPD1
TVP23B
TIGD1
EIF4E2
SENP1
PFKM
SF3A3
MRPL40
HIRA
NSA2
GFM2
ZNF791
ZNF490
GTPBP3
POLR3B
TMEM222
VPS25
BLOC1S6
MRPL3
MKRN2
DSTYK
AP3S2
ATPAF1
BCAT2
MTRNR2L9
CPSF1
UTP3
ZNF391
C11orf49
DRG2
NDUFC2-KCTD14
NDUFC2
GTF3C3
MITD1
ZNF302
CPPED1
MAF1
TATDN3
NSL1
FAM98B
MST1
GALK2
COPS2
SELENOH
MRPL16
AQR
ZNF205
SPAG8
SNX16
TRMU
STARD3
LSG1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
TSPAN10
NPLOC4
YBEY
MCM3AP
SNAP47
JMJD4
SLC39A13
THEM4
CYREN
FAM227B
DTWD1
VPS45
NSFL1C
MTOR
PEX3
ADAT2
TOR1AIP1
YIPF2
TIMM29
SMG7
HNRNPA1L2
SLC25A53
TRUB2
COQ4
MEIG1
CLK3
LRRC49
THAP10
COQ3
RPL37
PUS10
PEX13
AGK
ARL6IP4
SNRPD3
GUCD1
BRF2
ZER1
PLEKHM3
FBXO22
FAM228B
SF3B6
MRPS22
METTL9
YIPF3
POLR1C
TEFM
C18orf21
TXN2
TIMM9
KIAA0586
DDX1
TRDMT1
RUVBL1
EEFSEC
CFAP298-TCP10L
CFAP298
EIF2D
TMEM69
PCYT1A
RPS7
NUDT5
CDC123
NUF2
SSBP1
SLC44A1
MTIF2
MPHOSPH10
MCEE
TMEM101
TSEN15
GTF2H4
MRPS34
EME2
SAR1B
RPL29
MARK3
NELFB
TUT1
ALG10
NUP54
PPIL1
PIGL
PDCD6
WDR36
LTN1
LMAN2
C12orf73
SLC39A3
TMA16
PPIL3
NIF3L1
BANP
KLHL20
PCID2
CUL4A
ERI1
FAM118A
TBC1D13
LAS1L
TMEM242
IFTAP
ZNF581
DHX33
ZBTB11
SEC22B
SREK1IP1
CWC27
CCNC
CACNG8
MRPL58
TTC26
MTRNR2L10
NXT2
SNRPB
GRPEL2
WDR25
WARS1
C17orf75
PPIP5K2
GIN1
ANAPC5
ZNF461
ZNF195
PRRG2
NOSIP
INTS5
DNAJC25-GNG10
DNAJC25
NAA20
RFC4
C16orf46
ZNF562
TMEM68
TGS1
DNAJC24
DCDC1
MTMR9
DDT
ZC3HC1
MED18
EMC4
SEC11A
KCTD5
PHKA2
TSSC4
PTPRM
MAP2K5
VWA8
RAB18
MTRF1
DPAGT1
ANKRD40
ERCC6L2
MRPL39
SRP19
KRR1
SLC25A21
TRAPPC10
YJU2
ZNF564
ACBD6
DDTL
MTMR4
SDHAF3
NKAP
LSM5
ZNF846
ZNF410
CNPY3
ZSCAN12
NFKBIL1
ATP6V1G2
NEU3
COA6
TIGD6
HMGXB3
DNAJC2
TM9SF3
MTHFD2L
MCAT
LIG4
ABHD13
DPP9
GFM1
SBDS
FAM168A
WDR74
PPP1R11
UBIAD1
SMIM26
RBM28
SPCS1
GLT8D1
FBXW8
MFAP3
FAM114A2
SMIM19
SLC20A2
MBTPS2
DNAJB12
ZNF623
ZSCAN9
SPATA5L1
GATM
MRPL53
AP5Z1
CLOCK
CAP1
RSPH3
MTG1
LRRC58
TMEM30A
TUBGCP3
TMEM199
POLDIP2
PUM3
ZNF622
ATG5
PRORP
PPP2R3C
SLC52A2
FBXL6
AGO3
RPS20
UQCC1
KNSTRN
SH2B1
TUFM
ZBED9
FBXW11
TDP2
ACOT13
TMEM128
NVL
EXOSC3
CBLL1
PRSS27
EXOSC4
UFC1
SNRNP200
ZNF549
TTC14
C12orf57
MAGEF1
TTC23L
ZKSCAN4
ALDH3A2
PDCD2
MTR
CDC16
COPS4
ZNF596
C21orf91
METTL6
EAF1
TPD52L2
C8orf82
TXNDC9
EIF5B
PSMD6
PRKAB1
KIF22
PYURF
PIGY
HERC3
VIPAS39
AHSA1
PROSER1
NHLRC3
JRK
UNC50
COA5
PSME3
SPDL1
STMP1
MSANTD2
CARD8
POC5
TMX3
CCDC102B
LCORL
ZNF668
ZNF646
RSL24D1
IPO7
DISP1
H3C13
DCUN1D5
VRK1
DDX21
WDPCP
MDH1
NUP153
NUP107
SEC16B
PDCD6IP
MKRN3
POLDIP3
GABPA
ATP5PF
ZNF579
RPS4Y1
OPA1
RFX7
C8orf33
NSUN4
IPPK
TYW1B
PPID
ZNF558
ZNF570
ZNF569
DPH7
PIGQ
ECHDC1
OGFOD2
TYW1
USE1
LRRC8A
KYAT1
NFIB
SRSF7
CCDC152
FBXW2
FANCM
CSTF2
TAF12
NDUFA12
VPS26C
C4orf3
SDR39U1
STK3
H4C15
H4C14
SPATC1L
MVB12A
EIF3D
HSP90AB1
C8orf76
SIRT4
SUGT1
PSMD11
NDRG1
ZDHHC21
SCRIB
PNPO
NIPBL
TOMM22
GOSR2
INVS
ERP44
H4C11
FIP1L1
MANBAL
WDR4
DPP8
ZBTB4
POLR2A
NCBP2AS2
NCBP2
SPATA6L
PLPP6
RXYLT1
MPDU1
LOC100996842
EIF3H
CLTA
KLHL9
PRPF18
GPR137
TTLL12
SNRPD1
PRPF3
ZNF35
NFKBIZ
ARHGAP29
GOLPH3
DDX18
NBPF1
ABRAXAS1
DTD1
ETV5
SLF1
KIAA0825
CCNL1
SLC35C2
EFR3A
ZCCHC7
PRDX1
SRBD1
PSMC2
ATF6
SRSF2
MFSD11
MCL1
CCN2
EIF4A3
TPRKB
MFSD14A
GLO1
HIPK1
RARS1
JPT1
FUBP3
NCAPD2
MRPL51
EBAG9
PIGC
EFHC1
RPS27
DBF4B
APTX
SCNM1
LYSMD1
ARID4A
NOP2
SLC30A6
MTAP
PCIF1
JOSD2
OSGEPL1
RHOT2
CAST
TRIM4
CHIC2
CALM1
TRAM2
TARS3
DIS3L2
BBS10
ARL6IP1
RREB1
VPS36
ADAM17
POLR2J3
LRRFIP2
KMT2A
RHOB
PCDH9
EIF4A1
ADAR
POLR2M
TUT7
TANK
KAT6A
CCT7
KIAA0100
RMDN2
DPM3
ADPGK
LMNA
POLR1B
STAU1
SLC3A2
RAD23A
S100A10
FOS
DDX19A
APEH
ETV4
APMAP
SARAF
PHGDH
HP1BP3
CCDC14
C6orf89
STYXL1
H2BC18
KIF23
CEP350
TLE4
CLCC1
H2BC21
H2AC21
H2AC20
GLI4
PPIA
ATAD2
C15orf61
ZNF101
UAP1
LATS1
NXF1
ZNF580
UGGT2
RPL41
GGPS1
ARID4B
SSNA1
MAPKAP1
ANAPC2
TTI2
TERF2
MAT2A
ELAVL1
DBNL
STK17A
CTR9
ZBTB40
WTAP
SPTAN1
SOD2
FAM149B1
ECD
TSSK6
NDUFA13
LRRC37A3
PDK1
DYNC1LI1
PPIF
HERPUD1
CCDC22
ZNF197
GMFB
ARMC1
NOTCH2NLA
TSPOAP1
MOB4
MRPL54
APBA3
NOTCH2NLC
IMPACT
DCBLD2
SEC31A
RPS6
FAM133B
ZNF326
H3C15
H3C14
RPLP1
PSMD3
PABPC4
MAN1A2
VPS53
PERP
GEMIN2
CDC42BPA
XBP1
EIF4G2
ANO10
AKAP13
ABHD5
ZNF768
WDR43
TMX4
GADD45A
RPL6
SSRP1
SDCCAG8
HNRNPAB
CEP170
ASPH
UBE2S
HEATR6
JAK1
CDK12
ZNF697
TM2D3
SEC61G
PNRC2
AHR
PGAM5
MBNL1
FBXL2
ELMOD2
LYPLA2
TMEM50B
TMEM129
TACC3
AZIN1
PSMA5
PLSCR4
CCZ1B
CUL1
SNAPC3
SLC35D1
MYCBP2
LCMT2
ADAL
TMEM230
SMG5
PCBD2
PAK2
NEPRO
ITGB1BP1
CPSF3
CCN1
RHOU
MAP3K20
TMEM43
SMURF1
CHCHD4
AKT3
EFTUD2
CCDC103
WDR55
RBM43
CCZ1
EBNA1BP2
CFAP57
UTP23
SLC37A3
SLC25A6
H4C12
STXBP3
NAA50
JOSD1
ATP6V1A
AKIRIN2
PSMG1
MINPP1
ENPP4
CLIC5
TPRA1
PSEN2
INTS6
DIAPH1
SPG11
PARP11
ZBTB21
TXNDC11
TTLL11
QRICH1
EIF1
YRDC
FPGS
EIF3A
C1orf122
MKLN1
ZNF148
ZBTB26
STRIP1
PPP1CC
KLF6
DHPS
DESI2
CNOT6
MORC3
GNAI3
GATAD1
ZSCAN25
PIAS1
MOV10
CDC25A
SLTM
ANP32E
SYNCRIP
PARP2
PARP1
NDFIP2
MKRN1
CTNNAL1
WDR27
SLC30A5
MIB1
CSKMT
C7orf26
C6orf120
C11orf98
ATR
ABL1
YBX1
PDE6D
KLHL25
HSPBP1
UACA
SLC38A2
LPIN1
DPM2
CLPTM1
SENP6
SAV1
PPAN-P2RY11
PPAN
INTS2
SLC25A32
DCAF13
MYBL1
HNRNPU
BICD1
ZNF143
TCHP
AP2B1
ZNF3
RBM17
NECTIN3
CDK17
RMC1
PRADC1
OSER1
ZNF341
KHDRBS1
HERC4
TTPAL
SCO1
ADPRM
ACSL3
TMEM267
SDHAF2
NEK9
MAP4K3
CPSF7
ZCWPW2
SELENOT
POC1B-GALNT4
MIA3
EP300
DDX59
AZI2
YWHAB
PCNX2
COX20
TBC1D4
H1-5
BORCS5
ACTR2
TRIM24
SP3
SERPINI1
PDCD10
MTHFS
SUGP1
MCM3
MAU2
EPB41
TMPPE
PGS1
GLB1
GBA
CAAP1
ATP2A2
YWHAZ
YWHAG
UBAP2L
IARS2
C1orf43
TLK1
NDFIP1
GNAI2
CCDC74A
ZBTB37
RBM33
RB1CC1
NOM1
GTF2H3
EIF2B1
COMT
BCL2L13
PIBF1
PDXDC1
DNAH14
DIS3
ZCCHC3
UBA3
KLF5
IER5
DDX27
BTBD1
SMC4
POGZ
GTF2IRD2B
GSK3B
CCDC85B
SLC16A1
PTK2
NT5C2
GADD45GIP1
TBX15
RAB7A
PAFAH1B2
CYSTM1
WDR37
SCAI
RAB14
GSN
H1-2
ENAH
CNEP1R1
THOC3
SAXO2
RCC1L
RAD21
LUC7L2
EFL1
YKT6
SLC25A46
BACH1
RANBP17
ACAP2
TMEM9B
LYPLA1
LBR
HNRNPH1