ChIP-Atlas: Target genes

Potential target genes for CDK12

Query protein: CDK12
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728789 | THP-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDK12's Target genes

◢ CDK12: Average

◢ SRX5975300: 143B

◢ SRX5975305: 143B

◢ SRX14276667: 293

◢ SRX1144285: Jurkat

◢ SRX5975310: MG-63

◢ SRX5975315: MG-63

◣ SRX728789: THP-1

◢ SRX728790: THP-1

◢ CDK12: STRING

MTRNR2L8
CYP4F11
MTRNR2L2
RGPD2
RGPD1
USP17L8
DBF4B
ZBTB40
CDK12
SCNM1
LYSMD1
SMG5
ZNF684
C22orf34
ZMPSTE24
EXO5
MRPS14
ATF6
CAP1
TFPT
PRPF31
STX16
MTBP
MRPL13
ZBTB45
DMAP1
MRPL21
IGHMBP2
DPY19L4
UBE3B
SUPT7L
SLC4A1AP
MRPL44
ITGB3BP
EFCAB7
USP30
FAM207A
NME1-NME2
NME1
NDUFS7
MED23
INTS12
GSTCD
VPS13B
RPS7
TOP3B
PEX3
ADAT2
MAF1
IPO4
SF3A3
DCP1A
WDR24
NDUFB3
FAM126B
GOLGA3
DUS1L
REXO4
SNAP47
JMJD4
AAR2
CCAR2
CDK5RAP1
TMEM41A
NDUFS3
KBTBD4
COPS7B
SUGCT
MPLKIP
BRF2
TRIP4
GTF3C3
STX18
WDR83OS
WDR83
RFXANK
BORCS8
ALKBH3
FRA10AC1
GALK2
COPS2
SMG8
GEMIN7
ZNF408
ARHGAP1
ISY1-RAB43
ISY1
BMS1
MRPL40
HIRA
DCAF10
TACO1
AP3S2
MRPS31
PRRG2
NOSIP
PIH1D2
NKAPD1
HMGB1
MLEC
RAD54L2
EIF1AD
BANF1
B4GALT7
USPL1
NUF2
VPS52
RPS18
TMEM242
RTEL1
TBC1D19
TTC4
MAN2C1
RBBP5
WDR36
SLC24A1
INTS14
ZER1
NSA2
GFM2
SEC22B
TMEM222
NSFL1C
DSTYK
SLC33A1
MITD1
CCDC97
TATDN3
NSL1
FAM228B
ZNF165
UTP3
DRG2
COMMD2
TOR1AIP1
SF3B6
ZNF391
GTF2H2C
SEC13
NR1H2
SLC35A3
RTTN
MBTPS2
NOL8
CENPP
EIF3F
ZNF791
ZNF490
MRPL3
TEFM
GTF2H2C_2
ZDHHC6
VTI1A
VPS25
MKRN2
METTL9
AURKAIP1
TUT1
LSG1
SSBP1
PSMF1
FAM227B
DTWD1
NOL12
C17orf75
KLHL20
GTF3C5
RPL37
TNPO3
TRUB2
COQ4
YIPF2
TIMM29
MRPS18C
HELQ
NOXA1
GTF2H2
FAM98B
SLC39A3
TMEM101
SLC44A1
NMNAT1
LZIC
CPPED1
BBS1
PPIP5K2
GIN1
ACSF3
ZNF770
SMG7
MNAT1
CCDC57
ALG10B
MRPL1
RUVBL1
EEFSEC
EDC4
MTMR9
SLC39A13
INO80B
FEM1B
WDR11
SCAND1
NR1H3
ACP2
OTUD7B
TMA16
COX16
C11orf49
SELENOH
NOP16
HIGD2A
UBA5
ACAD11
PLEKHM3
GTPBP3
AQR
SAR1B
YJU2
MRPL16
VPS9D1
RNF6
SNRPD3
GUCD1
TVP23B
KCTD5
RRP15
TSPAN10
NPLOC4
DDX1
NUP54
C12orf73
POLR3B
PSMG3
MRPL48
STOML2
NDUFAF1
HNRNPA1L2
PCID2
CUL4A
EIF2D
NDUFC2-KCTD14
NDUFC2
C18orf21
TIGD1
EIF4E2
HEMK1
TSEN15
INTS5
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
HUS1
TTC26
ZSCAN22
NKAP
JRK
ANAPC5
PEMT
RPL29
CPSF1
PHB2
DNAJC25-GNG10
DNAJC25
SENP1
PFKM
MTOR
RBM28
MRPL58
CSTF2T
NELFB
TRMU
EXD2
CHCHD2
PDCD6
MRPS34
EME2
NUP107
AGK
PUS10
PEX13
DHX33
FBXO22
YBEY
MCM3AP
MTIF2
ALG10
ZNF623
PIGL
CGGBP1
LTN1
ZNF581
RAB18
THEM4
SEC11A
VPS45
TBC1D13
C10orf88
C3orf38
NUDCD3
PPIL3
NIF3L1
MEIG1
TMEM69
NXT2
CCNC
SLC25A53
BLOC1S6
MRPL39
TRDMT1
STARD3
ATPAF1
ERI1
GTF2H4
MPHOSPH10
MCEE
LMAN2
LRRC49
THAP10
HDAC8
CFAP298-TCP10L
CFAP298
SNRPB
KRR1
ANKRD40
GRPEL2
TMEM68
TGS1
CYREN
LAS1L
ZNF205
SEC16B
COQ3
WDR74
PHKA2
COA6
PDCD6IP
MKRN3
PPIL1
TIMM9
KIAA0586
WDR25
WARS1
ZBTB11
MCAT
TXN2
EXOSC4
ZNF668
ZNF646
ANTKMT
PCYT1A
TEDC1
SPAG8
DNAJC24
DCDC1
NFKBIL1
ATP6V1G2
PRSS27
IFTAP
FBXW8
BCAT2
DDT
DNAJC2
TIGD6
HMGXB3
CLK3
MED18
PDCD2
COPS4
ACBD6
DDTL
POLDIP3
FAM118A
GABPA
ATP5PF
SNRNP200
MTR
ZC3HC1
MTRF1
ZNF579
RPS4Y1
AGO3
ADPRHL1
ZNF561
KIF22
OPA1
UQCC1
RFX7
TUBGCP3
ARL6IP4
MRPS22
LSM5
SREK1IP1
CWC27
C8orf33
BANP
TSSC4
RPS20
MFAP3
FAM114A2
VWA8
ZNF564
NUDT5
LIG4
CDC123
ABHD13
ZNF596
NSUN4
CARD8
MST1
UFC1
TXNDC9
EIF5B
DPP9
MTMR4
EMC4
SRP19
SLC25A21
FBXW11
IPPK
SBDS
ZNF195
TDP2
SDHAF3
ACOT13
GFM1
ZNF461
ERCC6L2
TYW1B
RFC4
PPID
ZNF622
ZNF558
ZNF570
ZNF569
ZNF846
NEU3
NUP153
TMEM199
POLDIP2
TMEM128
NAA20
PTPRM
YIPF3
POLR1C
DPH7
CDC16
ZSCAN9
C12orf57
PIGQ
PPP1R11
SH2B1
MTHFD2L
DNAJB12
ECHDC1
OGFOD2
TYW1
TUFM
RSPH3
FAM168A
UBIAD1
SMIM19
SLC20A2
USE1
MTG1
UNC50
COA5
C16orf46
ATG5
STMP1
CLOCK
NVL
MRPL53
KNSTRN
LRRC8A
KYAT1
ZNF549
PRKAB1
ZNF410
METTL6
EAF1
LRRC58
NFIB
SRSF7
CCDC152
FBXW2
FANCM
EXOSC3
PSMD6
CSTF2
TAF12
NDUFA12
VPS26C
TTC14
MARK3
C4orf3
SDR39U1
CNPY3
WDPCP
MDH1
STK3
MAGEF1
PRORP
PPP2R3C
MAP2K5
DPAGT1
ZKSCAN4
SPCS1
GLT8D1
H4C15
H4C14
PYURF
PIGY
HERC3
SPATC1L
MVB12A
ZNF302
VIPAS39
AHSA1
PSME3
EIF3D
HSP90AB1
C8orf76
SIRT4
SUGT1
PUM3
PSMD11
ALDH3A2
TM9SF3
NDRG1
ZDHHC21
SCRIB
PNPO
NIPBL
RSL24D1
TOMM22
GOSR2
DISP1
INVS
ERP44
H4C11
SMIM26
FIP1L1
MANBAL
WDR4
DPP8
ZBTB4
POLR2A
TPD52L2
NCBP2AS2
NCBP2
SPATA5L1
GATM
SPATA6L
PLPP6
RXYLT1
MPDU1
LOC100996842
EIF3H
CLTA
TMEM30A
KLHL9
PRPF18
GPR137
TTLL12
SNRPD1
CACNG8
PRPF3
ZNF35
NFKBIZ
ARHGAP29
GOLPH3
DDX18
NBPF1
MTRNR2L9
ABRAXAS1
DTD1
ETV5
SLF1
KIAA0825
CCNL1
SLC35C2
EFR3A
ZNF562
ZCCHC7
PRDX1
TRAPPC10
SRBD1
PSMC2
SRSF2
MFSD11
MCL1
DCUN1D5
CCN2
EIF4A3
TPRKB
MFSD14A
GLO1
HIPK1
RARS1
JPT1
FUBP3
NCAPD2
MRPL51
CBLL1
EBAG9
H3C13
PIGC
POC5
EFHC1
RPS27
APTX
ARID4A
NOP2
SLC30A6
MTAP
PCIF1
JOSD2
OSGEPL1
DDX21
RHOT2
LCORL
CAST
TRIM4
CHIC2
CALM1
TRAM2
TARS3
DIS3L2
BBS10
ARL6IP1
RREB1
VPS36
ADAM17
POLR2J3
IPO7
LRRFIP2
KMT2A
RHOB
PCDH9
EIF4A1
ADAR
POLR2M
PROSER1
NHLRC3
TUT7
TANK
KAT6A
CCT7
KIAA0100
RMDN2
DPM3
ADPGK
LMNA
ZSCAN12
POLR1B
STAU1
SLC3A2
RAD23A
S100A10
FOS
DDX19A
APEH
ETV4
APMAP
TTC23L
SARAF
PHGDH
HP1BP3
CCDC14
C6orf89
STYXL1
H2BC18
KIF23
CEP350
TLE4
CLCC1
H2BC21
H2AC21
H2AC20
GLI4
PPIA
ATAD2
C15orf61
ZNF101
UAP1
LATS1
SLC52A2
NXF1
FBXL6
ZNF580
UGGT2
RPL41
GGPS1
ARID4B
SSNA1
MAPKAP1
ANAPC2
TTI2
TERF2
MAT2A
ELAVL1
DBNL
STK17A
CTR9
WTAP
SPTAN1
SOD2
FAM149B1
ECD
TSSK6
NDUFA13
LRRC37A3
PDK1
DYNC1LI1
PPIF
HERPUD1
CCDC22
C21orf91
ZNF197
GMFB
ARMC1
NOTCH2NLA
TSPOAP1
MOB4
MRPL54
APBA3
NOTCH2NLC
IMPACT
DCBLD2
MSANTD2
SEC31A
RPS6
FAM133B
ZNF326
H3C15
H3C14
RPLP1
PSMD3
PABPC4
MAN1A2
VPS53
SPDL1
PERP
GEMIN2
CDC42BPA
XBP1
EIF4G2
ANO10
AKAP13
ABHD5
ZNF768
WDR43
TMX4
GADD45A
RPL6
SSRP1
SDCCAG8
HNRNPAB
CEP170
ASPH
UBE2S
HEATR6
JAK1
ZNF697
TM2D3
SEC61G
PNRC2
AHR
PGAM5
MBNL1
FBXL2
ELMOD2
LYPLA2
TMEM50B
TMEM129
TACC3
AZIN1
PSMA5
PLSCR4
CCZ1B
CUL1
SNAPC3
SLC35D1
MYCBP2
LCMT2
ADAL
TMEM230
PCBD2
PAK2
NEPRO
ITGB1BP1
CPSF3
CCN1
RHOU
MAP3K20
TMEM43
SMURF1
CHCHD4
AKT3
EFTUD2
CCDC103
WDR55
RBM43
CCZ1
EBNA1BP2
CFAP57
UTP23
SLC37A3
SLC25A6
H4C12
STXBP3
NAA50
JOSD1
ATP6V1A
AKIRIN2
SNX16
PSMG1
MINPP1
ENPP4
CLIC5
TPRA1
PSEN2
INTS6
DIAPH1
SPG11
PARP11
ZBTB21
TXNDC11
TTLL11
QRICH1
EIF1
YRDC
FPGS
EIF3A
C1orf122
MKLN1
ZNF148
ZBTB26
STRIP1
PPP1CC
KLF6
DHPS
DESI2
CNOT6
MORC3
GNAI3
GATAD1
ZSCAN25
PIAS1
MOV10
CDC25A
VRK1
SLTM
ANP32E
SYNCRIP
PARP2
PARP1
NDFIP2
MKRN1
CTNNAL1
WDR27
SLC30A5
MIB1
CSKMT
C7orf26
C6orf120
C11orf98
ATR
ABL1
YBX1
PDE6D
KLHL25
HSPBP1
UACA
SLC38A2
LPIN1
DPM2
CLPTM1
SENP6
SAV1
PPAN-P2RY11
PPAN
INTS2
SLC25A32
DCAF13
MYBL1
HNRNPU
BICD1
ZNF143
TCHP
AP2B1
ZNF3
RBM17
NECTIN3
CDK17
RMC1
PRADC1
OSER1
ZNF341
KHDRBS1
HERC4
TTPAL
SCO1
ADPRM
ACSL3
TMEM267
SDHAF2
NEK9
MAP4K3
CPSF7
ZCWPW2
SELENOT
POC1B-GALNT4
MIA3
EP300
DDX59
AZI2
YWHAB
PCNX2
COX20
TBC1D4
H1-5
BORCS5
ACTR2
TRIM24
SP3
SERPINI1
PDCD10
MTHFS
C8orf82
SUGP1
MCM3
MAU2
EPB41
TMPPE
PGS1
GLB1
GBA
CAAP1
ATP2A2
AP5Z1
YWHAZ
YWHAG
UBAP2L
IARS2
C1orf43
TLK1
NDFIP1
GNAI2
CCDC74A
ZBTB37
RBM33
RB1CC1
NOM1
GTF2H3
EIF2B1
COMT
BCL2L13
PIBF1
PDXDC1
DNAH14
DIS3
ZCCHC3
UBA3
KLF5
IER5
DDX27
BTBD1
SMC4
POGZ
GTF2IRD2B
GSK3B
CCDC85B
SLC16A1
PTK2
NT5C2
GADD45GIP1
TBX15
RAB7A
PAFAH1B2
CYSTM1
WDR37
SCAI
RAB14
GSN
H1-2
ENAH
CNEP1R1
THOC3
SAXO2
RCC1L
RAD21
LUC7L2
EFL1
YKT6
SLC25A46
BACH1
RANBP17
ACAP2