ChIP-Atlas: Target genes

Potential target genes for CDK12

Query protein: CDK12
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5975310 | MG-63
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDK12's Target genes

◢ CDK12: Average

◢ SRX5975300: 143B

◢ SRX5975305: 143B

◢ SRX14276667: 293

◢ SRX1144285: Jurkat

◣ SRX5975310: MG-63

◢ SRX5975315: MG-63

◢ SRX728789: THP-1

◢ SRX728790: THP-1

◢ CDK12: STRING

MTBP
MRPL13
DPY19L4
MAF1
STX16
FAM207A
DMAP1
NDUFS7
SUPT7L
SLC4A1AP
VPS13B
ZBTB45
MRPL44
INTS12
GSTCD
UBE3B
USP30
ITGB3BP
EFCAB7
RFXANK
BORCS8
MED23
PEX3
ADAT2
WDR24
AAR2
NME1-NME2
NME1
TOP3B
RPS7
ISY1-RAB43
ISY1
MTRNR2L8
GOLGA3
GEMIN7
DUS1L
MBTPS2
CCAR2
MRPL21
IGHMBP2
SNAP47
JMJD4
WDR83OS
WDR83
BRF2
TRIP4
CDK5RAP1
ZNF791
ZNF490
MRPL40
HIRA
SMG8
PRRG2
NOSIP
GTF3C3
NDUFB3
FAM126B
TMEM41A
REXO4
GALK2
COPS2
COPS7B
NUF2
SF3A3
WDR36
NDUFS3
KBTBD4
DCP1A
ZNF391
TMEM242
DCAF10
MTRNR2L2
TACO1
RBBP5
EIF1AD
BANF1
DSTYK
VPS52
RPS18
TMEM222
AP3S2
MAN2C1
COMMD2
MLEC
SUGCT
MPLKIP
JRK
FAM228B
SF3B6
HMGB1
USPL1
TEFM
RTEL1
IPO4
SEC22B
B4GALT7
TOR1AIP1
BMS1
NSFL1C
CCDC97
NOXA1
ZNF408
ARHGAP1
METTL9
MKRN2
VPS25
KLHL20
MITD1
SLC33A1
FAM227B
DTWD1
FRA10AC1
GTF3C5
ALKBH3
ZER1
PIH1D2
NKAPD1
SLC39A3
TMA16
NOL8
CENPP
STX18
MRPS31
GTF2H2C
GTF2H2C_2
NR1H2
MTMR9
MRPL3
RPL37
CCDC57
LSG1
TTC4
AURKAIP1
TBC1D19
YIPF2
TIMM29
RUVBL1
EEFSEC
TRUB2
COQ4
TATDN3
NSL1
SNRPD3
GUCD1
DRG2
C12orf73
PPIP5K2
GIN1
MRPS34
EME2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
RAD54L2
UTP3
NOP16
HIGD2A
NSA2
GFM2
KCTD5
RNF6
SLC35A3
C17orf75
SLC44A1
FAM98B
SMG7
INTS5
SELENOH
TMEM101
NDUFC2-KCTD14
NDUFC2
NOL12
SLC24A1
INTS14
STOML2
TVP23B
RTTN
AQR
DDX1
SCAND1
ZNF165
SEC13
POLR3B
SEC16B
ZMPSTE24
PCID2
CUL4A
SSBP1
PSMF1
PLEKHM3
FEM1B
MEIG1
TUT1
MRPL58
NELFB
PHB2
ZSCAN22
LTN1
PSMG3
EDC4
ZNF205
EIF3F
NUP54
ZNF581
MRPL48
TSPAN10
NPLOC4
C11orf49
VPS9D1
ACSF3
NMNAT1
LZIC
RRP15
POLDIP3
WDR11
TRMU
RPS4Y1
TNPO3
NUP107
PDCD6IP
GTF2H2
NKAP
FBXW8
NXT2
MTIF2
MRPS18C
HELQ
ZNF770
MNAT1
HUS1
THEM4
SAR1B
RGPD2
RGPD1
SLC39A13
MTOR
EXOSC4
GTPBP3
LMAN2
NR1H3
ACP2
INO80B
ANAPC5
IFTAP
CPPED1
FBXO22
MRPL16
C18orf21
HNRNPA1L2
OTUD7B
CFAP298-TCP10L
CFAP298
SENP1
PFKM
ALG10
NUDCD3
SEC11A
CPSF1
PDCD6
MFAP3
FAM114A2
YJU2
TIGD1
EIF4E2
COQ3
PHKA2
ALG10B
MKRN3
UBA5
ACAD11
DNAJC25-GNG10
DNAJC25
TTC26
ZNF623
ZDHHC6
VTI1A
PPIL3
NIF3L1
ZNF668
ZNF646
RBM28
YBEY
MCM3AP
TMEM68
TGS1
CHCHD2
AGK
KRR1
PDCD2
RAB18
CCNC
GRPEL2
DHX33
WDR74
COX16
GABPA
ATP5PF
PPID
MRPL1
NDUFAF1
TBC1D13
PPIL1
NFIB
HEMK1
PEMT
BLOC1S6
DDT
PRSS27
LRRC49
THAP10
PUS10
PEX13
BBS1
TSEN15
ERI1
EIF2D
TMEM69
SNRPB
RPL29
CSTF2T
CGGBP1
C3orf38
MRPS22
GTF2H4
VPS45
C10orf88
TMEM199
POLDIP2
MPHOSPH10
MCEE
KIF22
MTR
ANKRD40
UQCC1
AGO3
EXD2
MRPL39
DNAJC2
ZNF622
ZNF558
NDRG1
ZBTB11
CYREN
DPP9
COA6
TIGD6
HMGXB3
SCRIB
LIG4
ABHD13
IPPK
ERCC6L2
DDTL
NSUN4
STARD3
SPATC1L
LSM5
TXN2
OPA1
SNRNP200
TRDMT1
MTMR4
CSTF2
EFHC1
FAM118A
SMIM19
SLC20A2
MTRNR2L9
PIGL
HSP90AB1
PRKAB1
TEDC1
TSSC4
RFX7
RPS20
ANTKMT
MED18
KLHL9
DNAJC24
DCDC1
MTAP
FBXW11
CARD8
EIF3H
ZNF596
ZNF564
PCYT1A
EFR3A
WDR25
WARS1
ZC3HC1
INVS
ERP44
BCAT2
ZDHHC21
FIP1L1
SLC30A6
ACBD6
H4C11
UNC50
COA5
SRSF7
UTP23
TUBGCP3
CLK3
MTRF1
SLC25A21
MCAT
SDR39U1
ATPAF1
MPDU1
LOC100996842
ADAM17
VPS26C
AP2B1
NUDT5
CDC123
C2CD2
ECHDC1
ARHGAP29
UFC1
GLO1
ARL6IP4
TTC14
C12orf57
CLTA
CCNL1
RREB1
GFM1
CHIC2
MBNL1
TTI2
ARL6IP1
GLI4
ZNF696
ESPNL
GOLPH3
SNAPC3
WDR55
TAF13
SLC25A53
HDAC8
LAS1L
TIMM9
KIAA0586
SPAG8
NFKBIL1
ATP6V1G2
COPS4
ZNF579
ADPRHL1
ZNF561
SREK1IP1
CWC27
C8orf33
BANP
VWA8
MST1
TXNDC9
EIF5B
EMC4
SRP19
SBDS
ZNF195
TDP2
SDHAF3
ACOT13
ZNF461
TYW1B
RFC4
ZNF570
ZNF569
ZNF846
NEU3
NUP153
TMEM128
NAA20
PTPRM
YIPF3
POLR1C
DPH7
CDC16
ZSCAN9
PIGQ
PPP1R11
SH2B1
MTHFD2L
DNAJB12
OGFOD2
TYW1
TUFM
RSPH3
FAM168A
UBIAD1
USE1
MTG1
C16orf46
ATG5
STMP1
CLOCK
NVL
MRPL53
KNSTRN
LRRC8A
KYAT1
ZNF549
ZNF410
METTL6
EAF1
LRRC58
CCDC152
FBXW2
FANCM
EXOSC3
PSMD6
TAF12
NDUFA12
MARK3
C4orf3
CNPY3
WDPCP
MDH1
STK3
MAGEF1
PRORP
PPP2R3C
MAP2K5
DPAGT1
ZKSCAN4
SPCS1
GLT8D1
H4C15
H4C14
PYURF
PIGY
HERC3
MVB12A
ZNF302
VIPAS39
AHSA1
PSME3
EIF3D
C8orf76
SIRT4
SUGT1
PUM3
PSMD11
ALDH3A2
TM9SF3
CAP1
PNPO
NIPBL
RSL24D1
TOMM22
GOSR2
DISP1
SMIM26
MANBAL
WDR4
DPP8
ZBTB4
POLR2A
TPD52L2
NCBP2AS2
NCBP2
SPATA5L1
GATM
SPATA6L
PLPP6
RXYLT1
TMEM30A
PRPF18
GPR137
TTLL12
SNRPD1
CACNG8
PRPF3
ZNF35
NFKBIZ
DDX18
NBPF1
ABRAXAS1
DTD1
ETV5
SLF1
KIAA0825
SLC35C2
ZNF562
ZCCHC7
PRDX1
TRAPPC10
SRBD1
PSMC2
ATF6
SRSF2
MFSD11
MCL1
DCUN1D5
CCN2
EIF4A3
TPRKB
MFSD14A
HIPK1
RARS1
JPT1
FUBP3
NCAPD2
MRPL51
CBLL1
EBAG9
H3C13
PIGC
POC5
RPS27
DBF4B
APTX
SCNM1
LYSMD1
ARID4A
NOP2
PCIF1
JOSD2
OSGEPL1
DDX21
RHOT2
LCORL
CAST
TRIM4
CALM1
TRAM2
TARS3
DIS3L2
BBS10
VPS36
POLR2J3
IPO7
LRRFIP2
KMT2A
RHOB
PCDH9
EIF4A1
ADAR
POLR2M
PROSER1
NHLRC3
TUT7
TANK
KAT6A
CCT7
KIAA0100
RMDN2
DPM3
ADPGK
LMNA
ZSCAN12
POLR1B
STAU1
SLC3A2
RAD23A
S100A10
FOS
DDX19A
APEH
ETV4
APMAP
TTC23L
SARAF
PHGDH
HP1BP3
CCDC14
C6orf89
STYXL1
H2BC18
KIF23
CEP350
TLE4
CLCC1
H2BC21
H2AC21
H2AC20
PPIA
ATAD2
C15orf61
ZNF101
UAP1
LATS1
SLC52A2
NXF1
FBXL6
ZNF580
UGGT2
RPL41
GGPS1
ARID4B
SSNA1
MAPKAP1
ANAPC2
TERF2
MAT2A
ELAVL1
DBNL
STK17A
CTR9
ZBTB40
WTAP
SPTAN1
SOD2
FAM149B1
ECD
TSSK6
NDUFA13
LRRC37A3
PDK1
DYNC1LI1
PPIF
HERPUD1
CCDC22
C21orf91
ZNF197
GMFB
ARMC1
NOTCH2NLA
TSPOAP1
MOB4
MRPL54
APBA3
NOTCH2NLC
IMPACT
DCBLD2
MSANTD2
SEC31A
RPS6
FAM133B
ZNF326
H3C15
H3C14
RPLP1
PSMD3
PABPC4
MAN1A2
VPS53
SPDL1
PERP
GEMIN2
CDC42BPA
XBP1
EIF4G2
ANO10
AKAP13
ABHD5
ZNF768
WDR43
TMX4
GADD45A
RPL6
SSRP1
SDCCAG8
HNRNPAB
CEP170
ASPH
UBE2S
HEATR6
JAK1
CDK12
ZNF697
TM2D3
SEC61G
PNRC2
AHR
PGAM5
FBXL2
ELMOD2
LYPLA2
TMEM50B
TMEM129
TACC3
AZIN1
PSMA5
PLSCR4
CCZ1B
CUL1
SLC35D1
MYCBP2
LCMT2
ADAL
TMEM230
SMG5
PCBD2
PAK2
NEPRO
ITGB1BP1
CPSF3
CCN1
RHOU
MAP3K20
TMEM43
SMURF1
CHCHD4
AKT3
EFTUD2
CCDC103
RBM43
CCZ1
EBNA1BP2
CFAP57
SLC37A3
SLC25A6
H4C12
STXBP3
NAA50
JOSD1
ATP6V1A
AKIRIN2
SNX16
PSMG1
MINPP1
ENPP4
CLIC5
TPRA1
PSEN2
INTS6
DIAPH1
SPG11
PARP11
ZBTB21
TXNDC11
TTLL11
QRICH1
EIF1
YRDC
FPGS
EIF3A
C1orf122
MKLN1
ZNF148
ZBTB26
STRIP1
PPP1CC
KLF6
DHPS
DESI2
CNOT6
MORC3
GNAI3
GATAD1
ZSCAN25
PIAS1
MOV10
CDC25A
VRK1
SLTM
ANP32E
SYNCRIP
PARP2
PARP1
NDFIP2
MKRN1
CTNNAL1
WDR27
SLC30A5
MIB1
CSKMT
C7orf26
C6orf120
C11orf98
ATR
ABL1
YBX1
PDE6D
KLHL25
HSPBP1
UACA
SLC38A2
LPIN1
DPM2
CLPTM1
SENP6
SAV1
PPAN-P2RY11
PPAN
INTS2
SLC25A32
DCAF13
MYBL1
HNRNPU
BICD1
ZNF143
TCHP
ZNF3
RBM17
NECTIN3
CDK17
RMC1
PRADC1
OSER1
ZNF341
KHDRBS1
HERC4
TTPAL
SCO1
ADPRM
ACSL3
TMEM267
SDHAF2
NEK9
MAP4K3
CPSF7
ZCWPW2
SELENOT
POC1B-GALNT4
MIA3
EP300
DDX59
AZI2
YWHAB
PCNX2
COX20
TBC1D4
H1-5
BORCS5
ACTR2
TRIM24
SP3
SERPINI1
PDCD10
MTHFS
C8orf82
SUGP1
MCM3
MAU2
EPB41
TMPPE
PGS1
GLB1
GBA
CAAP1
ATP2A2
AP5Z1
YWHAZ
YWHAG
UBAP2L
IARS2
C1orf43
TLK1
NDFIP1
GNAI2
CCDC74A
ZBTB37
RBM33
RB1CC1
NOM1
GTF2H3
EIF2B1
COMT
BCL2L13
PIBF1
PDXDC1
DNAH14
DIS3
ZCCHC3
UBA3
KLF5
IER5
DDX27
BTBD1
SMC4
POGZ
GTF2IRD2B
GSK3B
CCDC85B
SLC16A1
PTK2
NT5C2
GADD45GIP1
TBX15
RAB7A
PAFAH1B2
CYSTM1
WDR37
SCAI
RAB14
GSN
H1-2
ENAH
CNEP1R1
THOC3
SAXO2
RCC1L
RAD21
LUC7L2
EFL1
YKT6
SLC25A46
BACH1
RANBP17
ACAP2
TMEM9B
LYPLA1
LBR
HNRNPH1